RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 TWNKQ96RR1 684 aa10.78□□□□□ -0.68
TRAV33-201ENST00000557514 OSBPL2Q9H1P3 480 aa10.78□□□□□ -0.68
TRAV33-201ENST00000557514 KDM4CQ9H3R0 1056 aa10.78□□□□□ -0.68
TRAV33-201ENST00000557514 CAAP1Q9H8G2 361 aa10.78□□□□□ -0.68
TRAV33-201ENST00000557514 GEMIN8Q9NWZ8 242 aaKnown RBP10.78□□□□□ -0.68
TRAV33-201ENST00000557514 CA5BQ9Y2D0 317 aa10.78□□□□□ -0.68
TRAV33-201ENST00000557514 PCDHGA7Q9Y5G6 932 aa10.78□□□□□ -0.68
TRAV33-201ENST00000557514 ITIH6Q6UXX5 1313 aa10.78□□□□□ -0.68
TRAV33-201ENST00000557514 TBC1D3DA0A087WVF3 549 aa10.77□□□□□ -0.69
TRAV33-201ENST00000557514 TBC1D3IA0A087WXS9 549 aa10.77□□□□□ -0.69
TRAV33-201ENST00000557514 TBC1D3EA0A087X179 549 aa10.77□□□□□ -0.69
TRAV33-201ENST00000557514 TBC1D3KA0A087X1G2 549 aa10.77□□□□□ -0.69
TRAV33-201ENST00000557514 TARSL2A2RTX5 802 aaKnown RBP10.77□□□□□ -0.69
TRAV33-201ENST00000557514 BLACEA4D250 179 aa10.77□□□□□ -0.69
TRAV33-201ENST00000557514 TBC1D3FA6NER0 549 aaPredicted RBP10.77□□□□□ -0.69
TRAV33-201ENST00000557514 TBC1D3LB9A6J9 549 aa10.77□□□□□ -0.69
TRAV33-201ENST00000557514 PRAMEF26H0Y7S4 382 aa10.77□□□□□ -0.69
TRAV33-201ENST00000557514 K7ESM1 405 aa10.77□□□□□ -0.69
TRAV33-201ENST00000557514 SCAMP1O15126 338 aa10.77□□□□□ -0.69
TRAV33-201ENST00000557514 SLC7A4O43246 635 aa10.77□□□□□ -0.69
TRAV33-201ENST00000557514 TGFB1I1O43294 461 aa10.77□□□□□ -0.69
TRAV33-201ENST00000557514 PLRG1O43660 514 aaKnown RBP10.77□□□□□ -0.69
TRAV33-201ENST00000557514 KRT38O76015 456 aa10.77□□□□□ -0.69
TRAV33-201ENST00000557514 TBC1D3HP0C7X1 549 aa10.77□□□□□ -0.69
TRAV33-201ENST00000557514 THEGLP0DJG4 465 aa10.77□□□□□ -0.69
TRAV33-201ENST00000557514 MAT2AP31153 395 aaKnown RBP10.77□□□□□ -0.69
TRAV33-201ENST00000557514 CSKP41240 450 aa10.77□□□□□ -0.69
TRAV33-201ENST00000557514 ASPAP45381 313 aa10.77□□□□□ -0.69
TRAV33-201ENST00000557514 INCA1Q0VD86 236 aa10.77□□□□□ -0.69
TRAV33-201ENST00000557514 BIRC3Q13489 604 aa10.77□□□□□ -0.69
TRAV33-201ENST00000557514 ELAVL3Q14576 367 aaKnown RBP10.77□□□□□ -0.69
TRAV33-201ENST00000557514 STAT4Q14765 748 aa10.77□□□□□ -0.69
TRAV33-201ENST00000557514 TBR1Q16650 682 aa10.77□□□□□ -0.69
TRAV33-201ENST00000557514 ADGRF1Q5T601 910 aa10.77□□□□□ -0.69
TRAV33-201ENST00000557514 TBC1D3GQ6DHY5 549 aa10.77□□□□□ -0.69
TRAV33-201ENST00000557514 TBC1D3CQ6IPX1 549 aa10.77□□□□□ -0.69
TRAV33-201ENST00000557514 GUSBP11Q6P575 273 aa10.77□□□□□ -0.69
TRAV33-201ENST00000557514 STXBP4Q6ZWJ1 553 aa10.77□□□□□ -0.69
TRAV33-201ENST00000557514 SV2BQ7L1I2 683 aa10.77□□□□□ -0.69
TRAV33-201ENST00000557514 RSRC2Q7L4I2 434 aaKnown RBP10.77□□□□□ -0.69
TRAV33-201ENST00000557514 TBC1D3Q8IZP1 549 aaPredicted RBP10.77□□□□□ -0.69
TRAV33-201ENST00000557514 ARHGAP18Q8N392 663 aa10.77□□□□□ -0.69
TRAV33-201ENST00000557514 ZNF557Q8N988 423 aaPredicted RBP10.77□□□□□ -0.69
TRAV33-201ENST00000557514 RDH13Q8NBN7 331 aa10.77□□□□□ -0.69
TRAV33-201ENST00000557514 ZNF564Q8TBZ8 553 aaPredicted RBP10.77□□□□□ -0.69
TRAV33-201ENST00000557514 PLEKHO2Q8TD55 490 aa10.77□□□□□ -0.69
TRAV33-201ENST00000557514 ARRDC3Q96B67 414 aa10.77□□□□□ -0.69
TRAV33-201ENST00000557514 FAM129BQ96TA1 746 aa10.77□□□□□ -0.69
TRAV33-201ENST00000557514 FUCA2Q9BTY2 467 aa10.77□□□□□ -0.69
TRAV33-201ENST00000557514 DUSP23Q9BVJ7 150 aa10.77□□□□□ -0.69
TRAV33-201ENST00000557514 PANK4Q9NVE7 773 aa10.77□□□□□ -0.69
TRAV33-201ENST00000557514 INTS6Q9UL03 887 aaKnown RBP10.77□□□□□ -0.69
TRAV33-201ENST00000557514 HBS1LQ9Y450 684 aaKnown RBP10.77□□□□□ -0.69
TRAV33-201ENST00000557514 PCDHGA4Q9Y5G9 962 aa10.77□□□□□ -0.69
TRAV33-201ENST00000557514 CCDC187A0A096LP49 1063 aa10.76□□□□□ -0.69
TRAV33-201ENST00000557514 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.76□□□□□ -0.69
TRAV33-201ENST00000557514 EDDM13A0A1B0GTR0 161 aa10.76□□□□□ -0.69
TRAV33-201ENST00000557514 TTC34A8MYJ7 566 aa10.76□□□□□ -0.69
TRAV33-201ENST00000557514 RIOK3O14730 519 aaKnown RBP10.76□□□□□ -0.69
TRAV33-201ENST00000557514 EIF3DO15371 548 aaKnown RBP eCLIP10.76□□□□□ -0.69
TRAV33-201ENST00000557514 PHACTR2O75167 634 aa10.76□□□□□ -0.69
TRAV33-201ENST00000557514 CLSTN1O94985 981 aa10.76□□□□□ -0.69
TRAV33-201ENST00000557514 VNN1O95497 513 aa10.76□□□□□ -0.69
TRAV33-201ENST00000557514 SLFN14P0C7P3 912 aa10.76□□□□□ -0.69
TRAV33-201ENST00000557514 P4HA1P13674 534 aa10.76□□□□□ -0.69
TRAV33-201ENST00000557514 CASP4P49662 377 aa10.76□□□□□ -0.69
TRAV33-201ENST00000557514 METAP1P53582 386 aa10.76□□□□□ -0.69
TRAV33-201ENST00000557514 YWHAGP61981 247 aaKnown RBP eCLIP10.76□□□□□ -0.69
TRAV33-201ENST00000557514 CLDN10P78369 228 aa10.76□□□□□ -0.69
TRAV33-201ENST00000557514 ZNF177Q13360 481 aaPredicted RBP10.76□□□□□ -0.69
TRAV33-201ENST00000557514 CLCA4Q14CN2 919 aa10.76□□□□□ -0.69
TRAV33-201ENST00000557514 TGIF1Q15583 401 aa10.76□□□□□ -0.69
TRAV33-201ENST00000557514 SETMARQ53H47 684 aaPredicted RBP10.76□□□□□ -0.69
TRAV33-201ENST00000557514 AGBL4Q5VU57 503 aa10.76□□□□□ -0.69
TRAV33-201ENST00000557514 HIST2H2BCQ6DN03 193 aa10.76□□□□□ -0.69
TRAV33-201ENST00000557514 ZCCHC8Q6NZY4 707 aaKnown RBP10.76□□□□□ -0.69
TRAV33-201ENST00000557514 FOXR1Q6PIV2 292 aa10.76□□□□□ -0.69
TRAV33-201ENST00000557514 STK40Q8N2I9 435 aa10.76□□□□□ -0.69
TRAV33-201ENST00000557514 XXYLT1Q8NBI6 393 aa10.76□□□□□ -0.69
TRAV33-201ENST00000557514 TPCN2Q8NHX9 752 aa10.76□□□□□ -0.69
TRAV33-201ENST00000557514 CYFIP2Q96F07 1278 aa10.76□□□□□ -0.69
TRAV33-201ENST00000557514 IFT43Q96FT9 208 aa10.76□□□□□ -0.69
TRAV33-201ENST00000557514 KLHDC7BQ96G42 594 aa10.76□□□□□ -0.69
TRAV33-201ENST00000557514 ZSCAN31Q96LW9 406 aaPredicted RBP10.76□□□□□ -0.69
TRAV33-201ENST00000557514 IRX2Q9BZI1 471 aaPredicted RBP10.76□□□□□ -0.69
TRAV33-201ENST00000557514 NCKIPSDQ9NZQ3 722 aa10.76□□□□□ -0.69
TRAV33-201ENST00000557514 TP53BP1Q12888 1972 aaPredicted RBP10.76□□□□□ -0.69
TRAV33-201ENST00000557514 COL27A1Q8IZC6 1860 aaPredicted RBP10.75□□□□□ -0.69
TRAV33-201ENST00000557514 NEMP2A6NFY4 417 aa10.75□□□□□ -0.69
TRAV33-201ENST00000557514 RNGTTO60942 597 aaKnown RBP10.75□□□□□ -0.69
TRAV33-201ENST00000557514 RTN2O75298 545 aa10.75□□□□□ -0.69
TRAV33-201ENST00000557514 NEBLO76041 1014 aa10.75□□□□□ -0.69
TRAV33-201ENST00000557514 CENPBP07199 599 aaPredicted RBP10.75□□□□□ -0.69
TRAV33-201ENST00000557514 TRIM21P19474 475 aaKnown RBP10.75□□□□□ -0.69
TRAV33-201ENST00000557514 CASRP41180 1078 aa10.75□□□□□ -0.69
TRAV33-201ENST00000557514 CYP2J2P51589 502 aa10.75□□□□□ -0.69
TRAV33-201ENST00000557514 AP3M2P53677 418 aa10.75□□□□□ -0.69
TRAV33-201ENST00000557514 IGFBP7Q16270 282 aa10.75□□□□□ -0.69
TRAV33-201ENST00000557514 CDKN3Q16667 212 aa10.75□□□□□ -0.69
TRAV33-201ENST00000557514 POM121L1PQ3SYA9 428 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms