RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 SEMA4DQ92854 862 aa13.02□□□□□ -0.33
PSEN1-221ENST00000557293 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.02□□□□□ -0.33
PSEN1-221ENST00000557293 DPH1Q9BZG8 443 aa13.02□□□□□ -0.33
PSEN1-221ENST00000557293 IRX2Q9BZI1 471 aaPredicted RBP13.02□□□□□ -0.33
PSEN1-221ENST00000557293 POLR1BQ9H9Y6 1135 aa13.02□□□□□ -0.33
PSEN1-221ENST00000557293 STIM2Q9P246 746 aa13.02□□□□□ -0.33
PSEN1-221ENST00000557293 CYTH4Q9UIA0 394 aa13.02□□□□□ -0.33
PSEN1-221ENST00000557293 MTMR6Q9Y217 621 aa13.02□□□□□ -0.33
PSEN1-221ENST00000557293 CA5BQ9Y2D0 317 aa13.02□□□□□ -0.33
PSEN1-221ENST00000557293 ITIH6Q6UXX5 1313 aa13.02□□□□□ -0.33
PSEN1-221ENST00000557293 TBC1D3DA0A087WVF3 549 aa13.01□□□□□ -0.33
PSEN1-221ENST00000557293 TBC1D3IA0A087WXS9 549 aa13.01□□□□□ -0.33
PSEN1-221ENST00000557293 TBC1D3EA0A087X179 549 aa13.01□□□□□ -0.33
PSEN1-221ENST00000557293 TBC1D3KA0A087X1G2 549 aa13.01□□□□□ -0.33
PSEN1-221ENST00000557293 A0A1B0GVM2 712 aa13.01□□□□□ -0.33
PSEN1-221ENST00000557293 TBC1D3FA6NER0 549 aaPredicted RBP13.01□□□□□ -0.33
PSEN1-221ENST00000557293 TBC1D3LB9A6J9 549 aa13.01□□□□□ -0.33
PSEN1-221ENST00000557293 K7ENP7 123 aa13.01□□□□□ -0.33
PSEN1-221ENST00000557293 PDXKO00764 312 aa13.01□□□□□ -0.33
PSEN1-221ENST00000557293 ACSL4O60488 711 aa13.01□□□□□ -0.33
PSEN1-221ENST00000557293 NR3C1P04150 777 aa13.01□□□□□ -0.33
PSEN1-221ENST00000557293 TBC1D3HP0C7X1 549 aa13.01□□□□□ -0.33
PSEN1-221ENST00000557293 MYF5P13349 255 aa13.01□□□□□ -0.33
PSEN1-221ENST00000557293 TRIM21P19474 475 aaKnown RBP13.01□□□□□ -0.33
PSEN1-221ENST00000557293 C5AR1P21730 350 aa13.01□□□□□ -0.33
PSEN1-221ENST00000557293 DGKAP23743 735 aa13.01□□□□□ -0.33
PSEN1-221ENST00000557293 GCLMP48507 274 aa13.01□□□□□ -0.33
PSEN1-221ENST00000557293 PSMD8P48556 350 aa13.01□□□□□ -0.33
PSEN1-221ENST00000557293 CSRP3P50461 194 aa13.01□□□□□ -0.33
PSEN1-221ENST00000557293 VAMP7P51809 220 aa13.01□□□□□ -0.33
PSEN1-221ENST00000557293 ST8SIA6P61647 398 aa13.01□□□□□ -0.33
PSEN1-221ENST00000557293 RPS24P62847 133 aaKnown RBP13.01□□□□□ -0.33
PSEN1-221ENST00000557293 SLC45A4Q5BKX6 768 aa13.01□□□□□ -0.33
PSEN1-221ENST00000557293 KIAA1614Q5VZ46 1190 aa13.01□□□□□ -0.33
PSEN1-221ENST00000557293 TBC1D3GQ6DHY5 549 aa13.01□□□□□ -0.33
PSEN1-221ENST00000557293 TBC1D3CQ6IPX1 549 aa13.01□□□□□ -0.33
PSEN1-221ENST00000557293 MSANTD2Q6P1R3 559 aa13.01□□□□□ -0.33
PSEN1-221ENST00000557293 INO80CQ6PI98 192 aaPredicted RBP13.01□□□□□ -0.33
PSEN1-221ENST00000557293 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.01□□□□□ -0.33
PSEN1-221ENST00000557293 GRAMD1CQ8IYS0 662 aa13.01□□□□□ -0.33
PSEN1-221ENST00000557293 TBC1D3Q8IZP1 549 aaPredicted RBP13.01□□□□□ -0.33
PSEN1-221ENST00000557293 OR4C6Q8NH72 309 aa13.01□□□□□ -0.33
PSEN1-221ENST00000557293 PRR11Q96HE9 360 aaPredicted RBP13.01□□□□□ -0.33
PSEN1-221ENST00000557293 VCPIP1Q96JH7 1222 aa13.01□□□□□ -0.33
PSEN1-221ENST00000557293 PRICKLE1Q96MT3 831 aaPredicted RBP13.01□□□□□ -0.33
PSEN1-221ENST00000557293 IL17BQ9UHF5 180 aa13.01□□□□□ -0.33
PSEN1-221ENST00000557293 TPX2Q9ULW0 747 aaKnown RBP13.01□□□□□ -0.33
PSEN1-221ENST00000557293 EDDM13A0A1B0GTR0 161 aa13□□□□□ -0.33
PSEN1-221ENST00000557293 SPTLC2O15270 562 aa13□□□□□ -0.33
PSEN1-221ENST00000557293 POLR2DO15514 142 aaKnown RBP13□□□□□ -0.33
PSEN1-221ENST00000557293 EFSO43281 561 aa13□□□□□ -0.33
PSEN1-221ENST00000557293 LZTS3O60299 673 aaPredicted RBP13□□□□□ -0.33
PSEN1-221ENST00000557293 PPP6R2O75170 966 aa13□□□□□ -0.33
PSEN1-221ENST00000557293 RTN2O75298 545 aa13□□□□□ -0.33
PSEN1-221ENST00000557293 CSO75390 466 aaKnown RBP13□□□□□ -0.33
PSEN1-221ENST00000557293 SRPRAP08240 638 aaKnown RBP13□□□□□ -0.33
PSEN1-221ENST00000557293 TRIM49P0CI25 452 aa13□□□□□ -0.33
PSEN1-221ENST00000557293 TRIM49CP0CI26 452 aa13□□□□□ -0.33
PSEN1-221ENST00000557293 CKMT1AP12532 417 aa13□□□□□ -0.33
PSEN1-221ENST00000557293 MAT2AP31153 395 aaKnown RBP13□□□□□ -0.33
PSEN1-221ENST00000557293 AFMP43652 599 aa13□□□□□ -0.33
PSEN1-221ENST00000557293 OVGP1Q12889 678 aa13□□□□□ -0.33
PSEN1-221ENST00000557293 PITRM1Q5JRX3 1037 aa13□□□□□ -0.33
PSEN1-221ENST00000557293 IGF2-ASQ6U949 168 aa13□□□□□ -0.33
PSEN1-221ENST00000557293 PRPF39Q86UA1 669 aaKnown RBP13□□□□□ -0.33
PSEN1-221ENST00000557293 MFN1Q8IWA4 741 aa13□□□□□ -0.33
PSEN1-221ENST00000557293 APCDD1Q8J025 514 aa13□□□□□ -0.33
PSEN1-221ENST00000557293 SCML4Q8N228 414 aa13□□□□□ -0.33
PSEN1-221ENST00000557293 RNF139Q8WU17 664 aa13□□□□□ -0.33
PSEN1-221ENST00000557293 TATDN2Q93075 761 aa13□□□□□ -0.33
PSEN1-221ENST00000557293 AZIN2Q96A70 460 aa13□□□□□ -0.33
PSEN1-221ENST00000557293 RPL10LQ96L21 214 aaKnown RBP13□□□□□ -0.33
PSEN1-221ENST00000557293 CISHQ9NSE2 258 aa13□□□□□ -0.33
PSEN1-221ENST00000557293 ABCC13Q9NSE7 274 aa13□□□□□ -0.33
PSEN1-221ENST00000557293 SARDHQ9UL12 918 aa13□□□□□ -0.33
PSEN1-221ENST00000557293 PIEZO2Q9H5I5 2752 aa13□□□□□ -0.33
PSEN1-221ENST00000557293 COL27A1Q8IZC6 1860 aaPredicted RBP12.99□□□□□ -0.33
PSEN1-221ENST00000557293 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.99□□□□□ -0.33
PSEN1-221ENST00000557293 XPO1O14980 1071 aaKnown RBP12.99□□□□□ -0.33
PSEN1-221ENST00000557293 MAPK13O15264 365 aa12.99□□□□□ -0.33
PSEN1-221ENST00000557293 IRAK2O43187 625 aa12.99□□□□□ -0.33
PSEN1-221ENST00000557293 CUTAO60888 179 aa12.99□□□□□ -0.33
PSEN1-221ENST00000557293 ADH1BP00325 375 aa12.99□□□□□ -0.33
PSEN1-221ENST00000557293 VAV1P15498 845 aa12.99□□□□□ -0.33
PSEN1-221ENST00000557293 PDCP20941 246 aa12.99□□□□□ -0.33
PSEN1-221ENST00000557293 MZF1P28698 734 aaPredicted RBP12.99□□□□□ -0.33
PSEN1-221ENST00000557293 DAOAP59103 153 aa12.99□□□□□ -0.33
PSEN1-221ENST00000557293 DAB2P98082 770 aa12.99□□□□□ -0.33
PSEN1-221ENST00000557293 ADIGQ0VDE8 80 aa12.99□□□□□ -0.33
PSEN1-221ENST00000557293 STK38Q15208 465 aa12.99□□□□□ -0.33
PSEN1-221ENST00000557293 COLEC12Q5KU26 742 aa12.99□□□□□ -0.33
PSEN1-221ENST00000557293 CEP135Q66GS9 1140 aa12.99□□□□□ -0.33
PSEN1-221ENST00000557293 TMC6Q7Z403 805 aa12.99□□□□□ -0.33
PSEN1-221ENST00000557293 SLC46A1Q96NT5 459 aa12.99□□□□□ -0.33
PSEN1-221ENST00000557293 DEPDC7Q96QD5 511 aa12.99□□□□□ -0.33
PSEN1-221ENST00000557293 OSBPL2Q9H1P3 480 aa12.99□□□□□ -0.33
PSEN1-221ENST00000557293 MAGEF1Q9HAY2 307 aa12.99□□□□□ -0.33
PSEN1-221ENST00000557293 DMTF1Q9Y222 760 aa12.99□□□□□ -0.33
PSEN1-221ENST00000557293 PTPN13Q12923 2485 aa12.98□□□□□ -0.33
PSEN1-221ENST00000557293 PMS2P1A4D2B8 440 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms