RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 TRPC3Q13507 836 aa12.86□□□□□ -0.35
APEX1-216ENST00000557159 KCNT1Q5JUK3 1230 aa12.86□□□□□ -0.35
APEX1-216ENST00000557159 C16orf46Q6P387 395 aa12.86□□□□□ -0.35
APEX1-216ENST00000557159 BNC2Q6ZN30 1099 aaPredicted RBP12.86□□□□□ -0.35
APEX1-216ENST00000557159 ZNF534Q76KX8 674 aa12.86□□□□□ -0.35
APEX1-216ENST00000557159 CARM1Q86X55 608 aa12.86□□□□□ -0.35
APEX1-216ENST00000557159 WDR49Q8IV35 697 aa12.86□□□□□ -0.35
APEX1-216ENST00000557159 PHTF2Q8N3S3 785 aa12.86□□□□□ -0.35
APEX1-216ENST00000557159 JOSD2Q8TAC2 188 aa12.86□□□□□ -0.35
APEX1-216ENST00000557159 ABTB1Q969K4 478 aaPredicted RBP12.86□□□□□ -0.35
APEX1-216ENST00000557159 DUS3LQ96G46 650 aaKnown RBP12.86□□□□□ -0.35
APEX1-216ENST00000557159 RNF157Q96PX1 679 aa12.86□□□□□ -0.35
APEX1-216ENST00000557159 FERMT1Q9BQL6 677 aa12.86□□□□□ -0.35
APEX1-216ENST00000557159 TRIM56Q9BRZ2 755 aaKnown RBP12.86□□□□□ -0.35
APEX1-216ENST00000557159 CDH19Q9H159 772 aa12.86□□□□□ -0.35
APEX1-216ENST00000557159 UGT1A7Q9HAW7 530 aa12.86□□□□□ -0.35
APEX1-216ENST00000557159 UGT1A10Q9HAW8 530 aa12.86□□□□□ -0.35
APEX1-216ENST00000557159 UGT1A8Q9HAW9 530 aa12.86□□□□□ -0.35
APEX1-216ENST00000557159 MRPL40Q9NQ50 206 aaKnown RBP12.86□□□□□ -0.35
APEX1-216ENST00000557159 RRN3Q9NYV6 651 aa12.86□□□□□ -0.35
APEX1-216ENST00000557159 H3BNH8 94 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 CA12O43570 354 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 TADA2AO75478 443 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 GCATO75600 419 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 ALDOAP04075 364 aaKnown RBP12.85□□□□□ -0.35
APEX1-216ENST00000557159 PRKCGP05129 697 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 SUPT20HL2P0C7V6 817 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 RALBP11234 206 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 ZNF12P17014 697 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 MAGEA12P43365 314 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 PHKA2P46019 1235 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 CD151P48509 253 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 RPL10AP62906 217 aaKnown RBP12.85□□□□□ -0.35
APEX1-216ENST00000557159 PDE1CQ14123 709 aaPredicted RBP12.85□□□□□ -0.35
APEX1-216ENST00000557159 TAF1CQ15572 869 aaPredicted RBP12.85□□□□□ -0.35
APEX1-216ENST00000557159 LRRC8BQ6P9F7 803 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 RIOX2Q8IUF8 465 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 DEPDC1BQ8WUY9 529 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 PRPF31Q8WWY3 499 aaKnown RBP12.85□□□□□ -0.35
APEX1-216ENST00000557159 CDKL2Q92772 493 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 MCRS1Q96EZ8 462 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 RANBP9Q96S59 729 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 SH2D3AQ9BRG2 576 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 PALMDQ9NP74 551 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 CISHQ9NSE2 258 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 PNPLA3Q9NST1 481 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 PNPOQ9NVS9 261 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 APPL1Q9UKG1 709 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 BARX2Q9UMQ3 279 aaPredicted RBP12.85□□□□□ -0.35
APEX1-216ENST00000557159 FAF1Q9UNN5 650 aaPredicted RBP12.85□□□□□ -0.35
APEX1-216ENST00000557159 THSD7BQ9C0I4 1608 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 hCG_2014768A0A024R1R8 64 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 H7C0C1 242 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 DCXO43602 365 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 ZBTB14O43829 449 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 NCF2P19878 526 aaPredicted RBP12.85□□□□□ -0.35
APEX1-216ENST00000557159 SSTR3P32745 418 aaPredicted RBP12.85□□□□□ -0.35
APEX1-216ENST00000557159 ATP5OP48047 213 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 ACOT2P49753 483 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 CDKL1Q00532 357 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 MTM1Q13496 603 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 SURF1Q15526 300 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 CYP4A22Q5TCH4 519 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 SLC9A4Q6AI14 798 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 IYDQ6PHW0 289 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 XYLT1Q86Y38 959 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 BRSK2Q8IWQ3 736 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 EXOC8Q8IYI6 725 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 DSELQ8IZU8 1212 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 LILRA2Q8N149 483 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 HIPK4Q8NE63 616 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 GTF3C2Q8WUA4 911 aaPredicted RBP12.85□□□□□ -0.35
APEX1-216ENST00000557159 PDCD6IPQ8WUM4 868 aaKnown RBP12.85□□□□□ -0.35
APEX1-216ENST00000557159 SLC35B4Q969S0 331 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 CCT7Q99832 543 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 SLX1AQ9BQ83 275 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 CFHR5Q9BXR6 569 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 ZNF385DQ9H6B1 395 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 MRGBPQ9NV56 204 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 RBPJLQ9UBG7 517 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 PCDHGB4Q9UN71 923 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 PCDHGB5Q9Y5G0 923 aa12.85□□□□□ -0.35
APEX1-216ENST00000557159 MAFBQ9Y5Q3 323 aaPredicted RBP12.85□□□□□ -0.35
APEX1-216ENST00000557159 TRIM64A6NGJ6 449 aa12.84□□□□□ -0.35
APEX1-216ENST00000557159 MATN2O00339 956 aa12.84□□□□□ -0.35
APEX1-216ENST00000557159 KCNN4O15554 427 aa12.84□□□□□ -0.35
APEX1-216ENST00000557159 ME2P23368 584 aa12.84□□□□□ -0.35
APEX1-216ENST00000557159 TTKP33981 857 aa12.84□□□□□ -0.35
APEX1-216ENST00000557159 NAMPTP43490 491 aa12.84□□□□□ -0.35
APEX1-216ENST00000557159 ZNF143P52747 638 aaPredicted RBP12.84□□□□□ -0.35
APEX1-216ENST00000557159 PSMC1P62191 440 aaKnown RBP12.84□□□□□ -0.35
APEX1-216ENST00000557159 CRHR2Q13324 411 aa12.84□□□□□ -0.35
APEX1-216ENST00000557159 TRMT10BQ6PF06 316 aaKnown RBP12.84□□□□□ -0.35
APEX1-216ENST00000557159 CYP4V2Q6ZWL3 525 aaPredicted RBP12.84□□□□□ -0.35
APEX1-216ENST00000557159 LPCAT2Q7L5N7 544 aa12.84□□□□□ -0.35
APEX1-216ENST00000557159 C10orf107Q8IVU9 208 aa12.84□□□□□ -0.35
APEX1-216ENST00000557159 TAB3Q8N5C8 712 aaPredicted RBP12.84□□□□□ -0.35
APEX1-216ENST00000557159 LZTR1Q8N653 840 aa12.84□□□□□ -0.35
APEX1-216ENST00000557159 TRIML2Q8N7C3 387 aa12.84□□□□□ -0.35
APEX1-216ENST00000557159 PLD5Q8N7P1 536 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms