RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 MRE11P49959 708 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 ADKP55263 362 aaKnown RBP11.01□□□□□ -0.65
LINC00239-201ENST00000556973 NRG1Q02297 640 aaPredicted RBP11.01□□□□□ -0.65
LINC00239-201ENST00000556973 TBX2Q13207 712 aaPredicted RBP11.01□□□□□ -0.65
LINC00239-201ENST00000556973 MAPK8IP2Q13387 824 aaPredicted RBP11.01□□□□□ -0.65
LINC00239-201ENST00000556973 BYSLQ13895 437 aaKnown RBP11.01□□□□□ -0.65
LINC00239-201ENST00000556973 SIM2Q14190 667 aaPredicted RBP11.01□□□□□ -0.65
LINC00239-201ENST00000556973 STARD3Q14849 445 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 ACAP1Q15027 740 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 SLC18A3Q16572 532 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 FUT11Q495W5 492 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 USP39Q53GS9 565 aaKnown RBP11.01□□□□□ -0.65
LINC00239-201ENST00000556973 RAB6CQ53S08 254 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 PITRM1Q5JRX3 1037 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 CCDC122Q5T0U0 273 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 ANO7Q6IWH7 933 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 SCYL2Q6P3W7 929 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 TMC6Q7Z403 805 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 SLFN11Q7Z7L1 901 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 ALYREFQ86V81 257 aaKnown RBP11.01□□□□□ -0.65
LINC00239-201ENST00000556973 CIR1Q86X95 450 aaPredicted RBP11.01□□□□□ -0.65
LINC00239-201ENST00000556973 GAS2L3Q86XJ1 694 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 CNGA4Q8IV77 575 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 PGBD3Q8N328 593 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 SUMF1Q8NBK3 374 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 MDGA1Q8NFP4 955 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 FNIP1Q8TF40 1166 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 GAB3Q8WWW8 586 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 SORCS1Q8WY21 1168 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 NTAN1Q96AB6 310 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 ZNF653Q96CK0 615 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 NCAPGQ9BPX3 1015 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 RAB6CQ9H0N0 254 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 TMEM245Q9H330 911 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 DEF6Q9H4E7 631 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 CACNA2D2Q9NY47 1150 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 BCCIPQ9P287 314 aaKnown RBP eCLIP11.01□□□□□ -0.65
LINC00239-201ENST00000556973 MYO1AQ9UBC5 1043 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 SUN2Q9UH99 717 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 INTS6Q9UL03 887 aaKnown RBP11.01□□□□□ -0.65
LINC00239-201ENST00000556973 TBC1D30Q9Y2I9 924 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 SNX10Q9Y5X0 201 aa11.01□□□□□ -0.65
LINC00239-201ENST00000556973 PRR23AA6NEV1 266 aa11□□□□□ -0.65
LINC00239-201ENST00000556973 ATMINO43313 823 aaPredicted RBP11□□□□□ -0.65
LINC00239-201ENST00000556973 SYNCRIPO60506 623 aaKnown RBP11□□□□□ -0.65
LINC00239-201ENST00000556973 GFRA3O60609 400 aa11□□□□□ -0.65
LINC00239-201ENST00000556973 RPP40O75818 363 aaKnown RBP11□□□□□ -0.65
LINC00239-201ENST00000556973 CNTN5O94779 1100 aa11□□□□□ -0.65
LINC00239-201ENST00000556973 SRPRAP08240 638 aaKnown RBP11□□□□□ -0.65
LINC00239-201ENST00000556973 PSMA2P25787 234 aa11□□□□□ -0.65
LINC00239-201ENST00000556973 OR1E1P30953 314 aa11□□□□□ -0.65
LINC00239-201ENST00000556973 GGCXP38435 758 aa11□□□□□ -0.65
LINC00239-201ENST00000556973 EIF4A3P38919 411 aaKnown RBP11□□□□□ -0.65
LINC00239-201ENST00000556973 CSKP41240 450 aa11□□□□□ -0.65
LINC00239-201ENST00000556973 ST8SIA6P61647 398 aa11□□□□□ -0.65
LINC00239-201ENST00000556973 OGDHQ02218 1023 aa11□□□□□ -0.65
LINC00239-201ENST00000556973 SULT2A1Q06520 285 aa11□□□□□ -0.65
LINC00239-201ENST00000556973 SCAPQ12770 1279 aa11□□□□□ -0.65
LINC00239-201ENST00000556973 PTPRNQ16849 979 aa11□□□□□ -0.65
LINC00239-201ENST00000556973 ASTE1Q2TB18 679 aaPredicted RBP11□□□□□ -0.65
LINC00239-201ENST00000556973 PLEKHG6Q3KR16 790 aa11□□□□□ -0.65
LINC00239-201ENST00000556973 FNDC3BQ53EP0 1204 aaKnown RBP11□□□□□ -0.65
LINC00239-201ENST00000556973 CXorf57Q6NSI4 855 aaKnown RBP11□□□□□ -0.65
LINC00239-201ENST00000556973 KIAA1211LQ6NV74 962 aa11□□□□□ -0.65
LINC00239-201ENST00000556973 SERPINA13PQ6UXR4 307 aa11□□□□□ -0.65
LINC00239-201ENST00000556973 CEP68Q76N32 757 aa11□□□□□ -0.65
LINC00239-201ENST00000556973 ASCL5Q7RTU5 278 aa11□□□□□ -0.65
LINC00239-201ENST00000556973 SETD3Q86TU7 594 aaPredicted RBP11□□□□□ -0.65
LINC00239-201ENST00000556973 APCDD1Q8J025 514 aa11□□□□□ -0.65
LINC00239-201ENST00000556973 CCDC185Q8N715 623 aa11□□□□□ -0.65
LINC00239-201ENST00000556973 KDM1BQ8NB78 822 aa11□□□□□ -0.65
LINC00239-201ENST00000556973 CYB5D2Q8WUJ1 264 aa11□□□□□ -0.65
LINC00239-201ENST00000556973 HMGB4Q8WW32 186 aa11□□□□□ -0.65
LINC00239-201ENST00000556973 MRFAP1L1Q96HT8 127 aa11□□□□□ -0.65
LINC00239-201ENST00000556973 CCDC42Q96M95 316 aa11□□□□□ -0.65
LINC00239-201ENST00000556973 FEM1AQ9BSK4 669 aa11□□□□□ -0.65
LINC00239-201ENST00000556973 ZYG11BQ9C0D3 744 aa11□□□□□ -0.65
LINC00239-201ENST00000556973 THAP2Q9H0W7 228 aa11□□□□□ -0.65
LINC00239-201ENST00000556973 CD248Q9HCU0 757 aa11□□□□□ -0.65
LINC00239-201ENST00000556973 RAB23Q9ULC3 237 aa11□□□□□ -0.65
LINC00239-201ENST00000556973 ERVW-1Q9UQF0 538 aa11□□□□□ -0.65
LINC00239-201ENST00000556973 RAD54BQ9Y620 910 aa11□□□□□ -0.65
LINC00239-201ENST00000556973 MYO15AQ9UKN7 3530 aa10.99□□□□□ -0.65
LINC00239-201ENST00000556973 MUC22E2RYF6 1773 aaPredicted RBP10.99□□□□□ -0.65
LINC00239-201ENST00000556973 ZNF217O75362 1048 aa10.99□□□□□ -0.65
LINC00239-201ENST00000556973 CYP1A2P05177 515 aa10.99□□□□□ -0.65
LINC00239-201ENST00000556973 EPHX1P07099 455 aa10.99□□□□□ -0.65
LINC00239-201ENST00000556973 GABRG2P18507 467 aa10.99□□□□□ -0.65
LINC00239-201ENST00000556973 PRKCHP24723 683 aa10.99□□□□□ -0.65
LINC00239-201ENST00000556973 MZF1P28698 734 aaPredicted RBP10.99□□□□□ -0.65
LINC00239-201ENST00000556973 L1CAMP32004 1257 aa10.99□□□□□ -0.65
LINC00239-201ENST00000556973 NNMTP40261 264 aa10.99□□□□□ -0.65
LINC00239-201ENST00000556973 IRAK1P51617 712 aa10.99□□□□□ -0.65
LINC00239-201ENST00000556973 ZNF75DP51815 510 aa10.99□□□□□ -0.65
LINC00239-201ENST00000556973 GALCP54803 685 aa10.99□□□□□ -0.65
LINC00239-201ENST00000556973 ECT2LQ008S8 904 aa10.99□□□□□ -0.65
LINC00239-201ENST00000556973 GFPT1Q06210 699 aaPredicted RBP10.99□□□□□ -0.65
LINC00239-201ENST00000556973 SRSF5Q13243 272 aaKnown RBP10.99□□□□□ -0.65
LINC00239-201ENST00000556973 CAMK2GQ13555 558 aaPredicted RBP10.99□□□□□ -0.65
LINC00239-201ENST00000556973 ALFQ53S48 1182 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms