RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 GOT1P17174 413 aa9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 GLDCP23378 1020 aa9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 RPL13P26373 211 aaKnown RBP9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 GTF2H1P32780 548 aa9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 ACTN2P35609 894 aa9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 RXRGP48443 463 aa9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 MXI1P50539 228 aa9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 CCR5P51681 352 aa9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 PPP2CBP62714 309 aa9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 PPP2CAP67775 309 aa9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 INSM1Q01101 510 aaPredicted RBP9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 CFHR1Q03591 330 aa9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 ENPEPQ07075 957 aa9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 BST2Q10589 180 aaKnown RBP9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 SFSWAPQ12872 951 aaKnown RBP9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 ILKQ13418 452 aa9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 CDH18Q13634 790 aa9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 ARID5BQ14865 1188 aa9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 NFIL3Q16649 462 aa9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 TBC1D25Q3MII6 688 aa9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 SGO2Q562F6 1265 aa9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 SLC45A4Q5BKX6 768 aa9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 FSCBQ5H9T9 825 aa9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 NUGGCQ68CJ6 796 aa9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 NADSYN1Q6IA69 706 aa9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 MSANTD2Q6P1R3 559 aa9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 KANSL1Q7Z3B3 1105 aa9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 SPATS2Q86XZ4 545 aaKnown RBP9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 UNC45BQ8IWX7 931 aa9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 CFAP52Q8N1V2 620 aa9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 CARNMT1Q8N4J0 409 aa9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 DCBLD1Q8N8Z6 715 aa9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 ZNF557Q8N988 423 aaPredicted RBP9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 HJURPQ8NCD3 748 aaPredicted RBP9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 FBXL13Q8NEE6 735 aa9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 NAF1Q96HR8 494 aaKnown RBP9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 FAXDC2Q96IV6 333 aa9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 FAM129BQ96TA1 746 aa9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 ERVMER34-1Q9H9K5 563 aa9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 CNGB3Q9NQW8 809 aa9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 HESX1Q9UBX0 185 aa9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 SLCO3A1Q9UIG8 710 aa9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 ERVW-1Q9UQF0 538 aa9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 SPTA1P02549 2419 aa9.36□□□□□ -0.91
HNRNPC-227ENST00000556897 TBC1D3DA0A087WVF3 549 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 TBC1D3IA0A087WXS9 549 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 TBC1D3EA0A087X179 549 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 TBC1D3KA0A087X1G2 549 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 EDDM13A0A1B0GTR0 161 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 TARSL2A2RTX5 802 aaKnown RBP9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 TYW5A2RUC4 315 aaKnown RBP9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 TBC1D3FA6NER0 549 aaPredicted RBP9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 TBC1D3LB9A6J9 549 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 K7ELQ4 463 aaPredicted RBP9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 PIK3R2O00459 728 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 TRIM38O00635 465 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 LATO43561 262 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 GABBR2O75899 941 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 IL1BP01584 269 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 MYL1P05976 194 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 TBC1D3HP0C7X1 549 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 PFKFB1P16118 471 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 C5AR1P21730 350 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 MAT2AP31153 395 aaKnown RBP9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 NUMBP49757 651 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 RGS7P49802 495 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 METAP1P53582 386 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 TBX4P57082 545 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 DAOAP59103 153 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 KCNH2Q12809 1159 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 TAF1BQ53T94 588 aaPredicted RBP9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 PITRM1Q5JRX3 1037 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 TBC1D3GQ6DHY5 549 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 TBC1D3CQ6IPX1 549 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 NAPEPLDQ6IQ20 393 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 TENM4Q6N022 2769 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 KDM7AQ6ZMT4 941 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 SND1Q7KZF4 910 aaKnown RBP eCLIP9.35□□□□□ -0.914e-6■■□□□ 12.7
HNRNPC-227ENST00000556897 TBC1D3Q8IZP1 549 aaPredicted RBP9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 STK40Q8N2I9 435 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 EFCAB3Q8N7B9 438 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 MFSD2AQ8NA29 543 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 KDM1BQ8NB78 822 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 KCTD13Q8WZ19 329 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 RFFLQ8WZ73 363 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 PTPRN2Q92932 1015 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 RPL10LQ96L21 214 aaKnown RBP9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 LGMNQ99538 433 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 IRX2Q9BZI1 471 aaPredicted RBP9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 NUCKS1Q9H1E3 243 aaKnown RBP9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 CEP83Q9Y592 693 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 PCDHB1Q9Y5F3 818 aa9.35□□□□□ -0.91
HNRNPC-227ENST00000556897 MYO18BQ8IUG5 2567 aa9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 A0A1B0GVL5 298 aa9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 CYSRT1A8MQ03 144 aa9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 J3QKU1 62 aa9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 ERVH48-1M5A8F1 160 aa9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 O00370 1275 aa9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 SIGLEC6O43699 453 aa9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 RTN2O75298 545 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms