RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 AHI1Q8N157 1196 aa18.01■□□□□ 0.47
SHMT2-225ENST00000556798 ZNF513Q8N8E2 541 aaPredicted RBP18.01■□□□□ 0.47
SHMT2-225ENST00000556798 ZNF557Q8N988 423 aaPredicted RBP18.01■□□□□ 0.47
SHMT2-225ENST00000556798 OR52K2Q8NGK3 314 aa18.01■□□□□ 0.47
SHMT2-225ENST00000556798 CIPCQ9C0C6 399 aa18.01■□□□□ 0.47
SHMT2-225ENST00000556798 DHX35Q9H5Z1 703 aaKnown RBP18.01■□□□□ 0.47
SHMT2-225ENST00000556798 LUC7LQ9NQ29 371 aaKnown RBP18.01■□□□□ 0.47
SHMT2-225ENST00000556798 CKAP5Q14008 2032 aa18.01■□□□□ 0.47
SHMT2-225ENST00000556798 NUP205Q92621 2012 aa18■□□□□ 0.47
SHMT2-225ENST00000556798 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18■□□□□ 0.47
SHMT2-225ENST00000556798 CREB3O43889 395 aa18■□□□□ 0.47
SHMT2-225ENST00000556798 CLDN11O75508 207 aa18■□□□□ 0.47
SHMT2-225ENST00000556798 MTA2O94776 668 aa18■□□□□ 0.47
SHMT2-225ENST00000556798 PROSCO94903 275 aa18■□□□□ 0.47
SHMT2-225ENST00000556798 KLF8O95600 359 aaPredicted RBP18■□□□□ 0.47
SHMT2-225ENST00000556798 HOXC13P31276 330 aa18■□□□□ 0.47
SHMT2-225ENST00000556798 GJC1P36383 396 aa18■□□□□ 0.47
SHMT2-225ENST00000556798 WASP42768 502 aa18■□□□□ 0.47
SHMT2-225ENST00000556798 SATB1Q01826 763 aa18■□□□□ 0.47
SHMT2-225ENST00000556798 SLC25A11Q02978 314 aaKnown RBP18■□□□□ 0.47
SHMT2-225ENST00000556798 ZNF177Q13360 481 aaPredicted RBP18■□□□□ 0.47
SHMT2-225ENST00000556798 KCNT1Q5JUK3 1230 aa18■□□□□ 0.47
SHMT2-225ENST00000556798 ERMARDQ5T6L9 678 aa18■□□□□ 0.47
SHMT2-225ENST00000556798 KIAA0907Q7Z7F0 614 aaPredicted RBP18■□□□□ 0.47
SHMT2-225ENST00000556798 SPEM1Q8N4L4 309 aa18■□□□□ 0.47
SHMT2-225ENST00000556798 IL17RCQ8NAC3 791 aa18■□□□□ 0.47
SHMT2-225ENST00000556798 WFIKKN2Q8TEU8 576 aa18■□□□□ 0.47
SHMT2-225ENST00000556798 CYB5D2Q8WUJ1 264 aa18■□□□□ 0.47
SHMT2-225ENST00000556798 TBC1D31Q96DN5 1066 aa18■□□□□ 0.47
SHMT2-225ENST00000556798 KCTD15Q96SI1 283 aaPredicted RBP18■□□□□ 0.47
SHMT2-225ENST00000556798 ACOX2Q99424 681 aa18■□□□□ 0.47
SHMT2-225ENST00000556798 ZYG11BQ9C0D3 744 aa18■□□□□ 0.47
SHMT2-225ENST00000556798 KIAA1522Q9P206 1035 aaPredicted RBP18■□□□□ 0.47
SHMT2-225ENST00000556798 INTS6Q9UL03 887 aaKnown RBP18■□□□□ 0.47
SHMT2-225ENST00000556798 STARD13Q9Y3M8 1113 aa18■□□□□ 0.47
SHMT2-225ENST00000556798 EML5Q05BV3 1969 aa18■□□□□ 0.47
SHMT2-225ENST00000556798 CHURC1-FNTBB4DL54 471 aa17.99■□□□□ 0.47
SHMT2-225ENST00000556798 GALR2O43603 387 aaPredicted RBP17.99■□□□□ 0.47
SHMT2-225ENST00000556798 MZF1P28698 734 aaPredicted RBP17.99■□□□□ 0.47
SHMT2-225ENST00000556798 L1CAMP32004 1257 aa17.99■□□□□ 0.47
SHMT2-225ENST00000556798 NOP2P46087 812 aaKnown RBP17.99■□□□□ 0.47
SHMT2-225ENST00000556798 TAS2R40P59535 323 aa17.99■□□□□ 0.47
SHMT2-225ENST00000556798 MRPS21P82921 87 aaKnown RBP17.99■□□□□ 0.47
SHMT2-225ENST00000556798 SEMA3BQ13214 749 aa17.99■□□□□ 0.47
SHMT2-225ENST00000556798 GSE1Q14687 1217 aa17.99■□□□□ 0.47
SHMT2-225ENST00000556798 PITRM1Q5JRX3 1037 aa17.99■□□□□ 0.47
SHMT2-225ENST00000556798 MBLAC2Q68D91 279 aa17.99■□□□□ 0.47
SHMT2-225ENST00000556798 KIAA1328Q86T90 577 aa17.99■□□□□ 0.47
SHMT2-225ENST00000556798 C1orf210Q8IVY1 113 aa17.99■□□□□ 0.47
SHMT2-225ENST00000556798 APCDD1Q8J025 514 aa17.99■□□□□ 0.47
SHMT2-225ENST00000556798 TXNDC5Q8NBS9 432 aaKnown RBP17.99■□□□□ 0.47
SHMT2-225ENST00000556798 CCDC26Q8TAB7 109 aa17.99■□□□□ 0.47
SHMT2-225ENST00000556798 HSPH1Q92598 858 aa17.99■□□□□ 0.47
SHMT2-225ENST00000556798 ERLEC1Q96DZ1 483 aa17.99■□□□□ 0.47
SHMT2-225ENST00000556798 EPAS1Q99814 870 aa17.99■□□□□ 0.47
SHMT2-225ENST00000556798 NCAPGQ9BPX3 1015 aa17.99■□□□□ 0.47
SHMT2-225ENST00000556798 IER2Q9BTL4 223 aa17.99■□□□□ 0.47
SHMT2-225ENST00000556798 ELOVL2Q9NXB9 296 aa17.99■□□□□ 0.47
SHMT2-225ENST00000556798 PPARGC1AQ9UBK2 798 aaKnown RBP17.99■□□□□ 0.47
SHMT2-225ENST00000556798 ZNF212Q9UDV6 495 aa17.99■□□□□ 0.47
SHMT2-225ENST00000556798 A0A0U1RQJ8 604 aa17.98■□□□□ 0.47
SHMT2-225ENST00000556798 SGK1O00141 431 aa17.98■□□□□ 0.47
SHMT2-225ENST00000556798 LAMTOR5O43504 91 aa17.98■□□□□ 0.47
SHMT2-225ENST00000556798 ADAM23O75077 832 aa17.98■□□□□ 0.47
SHMT2-225ENST00000556798 ATG13O75143 517 aa17.98■□□□□ 0.47
SHMT2-225ENST00000556798 RHOCP08134 193 aa17.98■□□□□ 0.47
SHMT2-225ENST00000556798 RARAP10276 462 aa17.98■□□□□ 0.47
SHMT2-225ENST00000556798 OR1E1P30953 314 aa17.98■□□□□ 0.47
SHMT2-225ENST00000556798 MAN1A1P33908 653 aa17.98■□□□□ 0.47
SHMT2-225ENST00000556798 CCR3P51677 355 aa17.98■□□□□ 0.47
SHMT2-225ENST00000556798 VAV2P52735 878 aa17.98■□□□□ 0.47
SHMT2-225ENST00000556798 TPI1P60174 286 aa17.98■□□□□ 0.47
SHMT2-225ENST00000556798 EIF4HQ15056 248 aaKnown RBP17.98■□□□□ 0.47
SHMT2-225ENST00000556798 TCEAL1Q15170 157 aa17.98■□□□□ 0.47
SHMT2-225ENST00000556798 PLEKHG6Q3KR16 790 aa17.98■□□□□ 0.47
SHMT2-225ENST00000556798 PPP6R3Q5H9R7 873 aaPredicted RBP17.98■□□□□ 0.47
SHMT2-225ENST00000556798 RNF219Q5W0B1 726 aaPredicted RBP17.98■□□□□ 0.47
SHMT2-225ENST00000556798 TSSK4Q6SA08 328 aa17.98■□□□□ 0.47
SHMT2-225ENST00000556798 LRRC8AQ8IWT6 810 aa17.98■□□□□ 0.47
SHMT2-225ENST00000556798 CHPFQ8IZ52 775 aa17.98■□□□□ 0.47
SHMT2-225ENST00000556798 MAML2Q8IZL2 1156 aaPredicted RBP17.98■□□□□ 0.47
SHMT2-225ENST00000556798 CCDC112Q8NEF3 446 aa17.98■□□□□ 0.47
SHMT2-225ENST00000556798 UCMAQ8WVF2 138 aa17.98■□□□□ 0.47
SHMT2-225ENST00000556798 ATRIPQ8WXE1 791 aa17.98■□□□□ 0.47
SHMT2-225ENST00000556798 ACDQ96AP0 544 aa17.98■□□□□ 0.47
SHMT2-225ENST00000556798 LACRTQ9GZZ8 138 aa17.98■□□□□ 0.47
SHMT2-225ENST00000556798 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.98■□□□□ 0.47
SHMT2-225ENST00000556798 NDFIP2Q9NV92 336 aa17.98■□□□□ 0.47
SHMT2-225ENST00000556798 CACNA2D2Q9NY47 1150 aa17.98■□□□□ 0.47
SHMT2-225ENST00000556798 SALL4Q9UJQ4 1053 aa17.98■□□□□ 0.47
SHMT2-225ENST00000556798 TBC1D30Q9Y2I9 924 aa17.98■□□□□ 0.47
SHMT2-225ENST00000556798 HYOU1Q9Y4L1 999 aa17.98■□□□□ 0.47
SHMT2-225ENST00000556798 EEF2KO00418 725 aaKnown RBP17.97■□□□□ 0.47
SHMT2-225ENST00000556798 RHOQP17081 205 aa17.97■□□□□ 0.47
SHMT2-225ENST00000556798 POLR2EP19388 210 aaKnown RBP17.97■□□□□ 0.47
SHMT2-225ENST00000556798 EPHB2P29323 1055 aa17.97■□□□□ 0.47
SHMT2-225ENST00000556798 CTSOP43234 321 aaPredicted RBP17.97■□□□□ 0.47
SHMT2-225ENST00000556798 CXCL12P48061 93 aa17.97■□□□□ 0.47
SHMT2-225ENST00000556798 CCZ1BP86790 482 aa17.97■□□□□ 0.47
SHMT2-225ENST00000556798 CCZ1P86791 482 aaPredicted RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms