RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 SYNCRIPO60506 623 aaKnown RBP10.66□□□□□ -0.7
SHMT2-224ENST00000556737 PAGE1O75459 146 aa10.66□□□□□ -0.7
SHMT2-224ENST00000556737 ADCY5O95622 1261 aa10.66□□□□□ -0.7
SHMT2-224ENST00000556737 ASLP04424 464 aa10.66□□□□□ -0.7
SHMT2-224ENST00000556737 ATP5BP06576 529 aaKnown RBP10.66□□□□□ -0.7
SHMT2-224ENST00000556737 POLR2EP19388 210 aaKnown RBP10.66□□□□□ -0.7
SHMT2-224ENST00000556737 ABCB4P21439 1286 aa10.66□□□□□ -0.7
SHMT2-224ENST00000556737 MMP8P22894 467 aa10.66□□□□□ -0.7
SHMT2-224ENST00000556737 CD6P30203 668 aa10.66□□□□□ -0.7
SHMT2-224ENST00000556737 HOXD12P35452 270 aa10.66□□□□□ -0.7
SHMT2-224ENST00000556737 STAT1P42224 750 aa10.66□□□□□ -0.7
SHMT2-224ENST00000556737 CXCR3P49682 368 aa10.66□□□□□ -0.7
SHMT2-224ENST00000556737 TPMTP51580 245 aa10.66□□□□□ -0.7
SHMT2-224ENST00000556737 ARID5AQ03989 594 aa10.66□□□□□ -0.7
SHMT2-224ENST00000556737 UBXN1Q04323 297 aa10.66□□□□□ -0.7
SHMT2-224ENST00000556737 ZNF33AQ06730 810 aa10.66□□□□□ -0.7
SHMT2-224ENST00000556737 ARID5BQ14865 1188 aa10.66□□□□□ -0.7
SHMT2-224ENST00000556737 PLEKHG6Q3KR16 790 aa10.66□□□□□ -0.7
SHMT2-224ENST00000556737 SLC25A52Q3SY17 297 aa10.66□□□□□ -0.7
SHMT2-224ENST00000556737 BRMS1LQ5PSV4 323 aa10.66□□□□□ -0.7
SHMT2-224ENST00000556737 C14orf80Q86SX3 495 aa10.66□□□□□ -0.7
SHMT2-224ENST00000556737 ERICH1Q86X53 443 aa10.66□□□□□ -0.7
SHMT2-224ENST00000556737 APCDD1Q8J025 514 aa10.66□□□□□ -0.7
SHMT2-224ENST00000556737 DEFB119Q8N690 84 aa10.66□□□□□ -0.7
SHMT2-224ENST00000556737 NEK11Q8NG66 645 aa10.66□□□□□ -0.7
SHMT2-224ENST00000556737 PRCCQ92733 491 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-224ENST00000556737 ALG14Q96F25 216 aa10.66□□□□□ -0.7
SHMT2-224ENST00000556737 SIPA1Q96FS4 1042 aa10.66□□□□□ -0.7
SHMT2-224ENST00000556737 TOE1Q96GM8 510 aaKnown RBP10.66□□□□□ -0.7
SHMT2-224ENST00000556737 HSPA12BQ96MM6 686 aa10.66□□□□□ -0.7
SHMT2-224ENST00000556737 SPAG5Q96R06 1193 aa10.66□□□□□ -0.7
SHMT2-224ENST00000556737 PCDHB18PQ96TA0 734 aa10.66□□□□□ -0.7
SHMT2-224ENST00000556737 PDCL3Q9H2J4 239 aa10.66□□□□□ -0.7
SHMT2-224ENST00000556737 PRSS16Q9NQE7 514 aa10.66□□□□□ -0.7
SHMT2-224ENST00000556737 METTL5Q9NRN9 209 aaKnown RBP10.66□□□□□ -0.7
SHMT2-224ENST00000556737 TMPRSS4Q9NRS4 437 aa10.66□□□□□ -0.7
SHMT2-224ENST00000556737 RRN3Q9NYV6 651 aa10.66□□□□□ -0.7
SHMT2-224ENST00000556737 STAP1Q9ULZ2 295 aa10.66□□□□□ -0.7
SHMT2-224ENST00000556737 ADAMTS9Q9P2N4 1935 aa10.66□□□□□ -0.7
SHMT2-224ENST00000556737 DOCK4Q8N1I0 1966 aa10.65□□□□□ -0.7
SHMT2-224ENST00000556737 H0Y626 953 aa10.65□□□□□ -0.7
SHMT2-224ENST00000556737 GOLGA8SH3BPF8 625 aa10.65□□□□□ -0.7
SHMT2-224ENST00000556737 CDX4O14627 284 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-224ENST00000556737 KHNYNO15037 678 aaKnown RBP10.65□□□□□ -0.7
SHMT2-224ENST00000556737 ZBTB24O43167 697 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-224ENST00000556737 UNGP13051 313 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-224ENST00000556737 MZF1P28698 734 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-224ENST00000556737 NUMBP49757 651 aa10.65□□□□□ -0.7
SHMT2-224ENST00000556737 STK19P49842 368 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-224ENST00000556737 PLK1P53350 603 aa10.65□□□□□ -0.7
SHMT2-224ENST00000556737 GSCP56915 257 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-224ENST00000556737 RNASE9P60153 205 aaKnown RBP10.65□□□□□ -0.7
SHMT2-224ENST00000556737 RPS14P62263 151 aaKnown RBP10.65□□□□□ -0.7
SHMT2-224ENST00000556737 IRX4P78413 519 aa10.65□□□□□ -0.7
SHMT2-224ENST00000556737 AUHQ13825 339 aaKnown RBP10.65□□□□□ -0.7
SHMT2-224ENST00000556737 HNRNPA1L2Q32P51 320 aaKnown RBP10.65□□□□□ -0.7
SHMT2-224ENST00000556737 RAB6CQ53S08 254 aa10.65□□□□□ -0.7
SHMT2-224ENST00000556737 TRIM61Q5EBN2 209 aa10.65□□□□□ -0.7
SHMT2-224ENST00000556737 RABGAP1LQ5R372 815 aa10.65□□□□□ -0.7
SHMT2-224ENST00000556737 SLC23A3Q6PIS1 610 aa10.65□□□□□ -0.7
SHMT2-224ENST00000556737 ARCQ7LC44 396 aa10.65□□□□□ -0.7
SHMT2-224ENST00000556737 DRC7Q8IY82 874 aa10.65□□□□□ -0.7
SHMT2-224ENST00000556737 EMC1Q8N766 993 aa10.65□□□□□ -0.7
SHMT2-224ENST00000556737 KDM1BQ8NB78 822 aa10.65□□□□□ -0.7
SHMT2-224ENST00000556737 MSANTD4Q8NCY6 345 aa10.65□□□□□ -0.7
SHMT2-224ENST00000556737 SLC30A5Q8TAD4 765 aa10.65□□□□□ -0.7
SHMT2-224ENST00000556737 BAP1Q92560 729 aa10.65□□□□□ -0.7
SHMT2-224ENST00000556737 RNF34Q969K3 372 aa10.65□□□□□ -0.7
SHMT2-224ENST00000556737 ZNF419Q96HQ0 510 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-224ENST00000556737 CFAP57Q96MR6 1250 aa10.65□□□□□ -0.7
SHMT2-224ENST00000556737 RPRD1AQ96P16 312 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-224ENST00000556737 C11orf70Q9BRQ4 267 aa10.65□□□□□ -0.7
SHMT2-224ENST00000556737 TKTL2Q9H0I9 626 aa10.65□□□□□ -0.7
SHMT2-224ENST00000556737 RAB6CQ9H0N0 254 aa10.65□□□□□ -0.7
SHMT2-224ENST00000556737 FBRSQ9HAH7 460 aa10.65□□□□□ -0.7
SHMT2-224ENST00000556737 CAPN10Q9HC96 672 aa10.65□□□□□ -0.7
SHMT2-224ENST00000556737 RTN4Q9NQC3 1192 aaKnown RBP10.65□□□□□ -0.7
SHMT2-224ENST00000556737 FSCN3Q9NQT6 498 aa10.65□□□□□ -0.7
SHMT2-224ENST00000556737 KIAA1522Q9P206 1035 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-224ENST00000556737 SLC12A6Q9UHW9 1150 aa10.65□□□□□ -0.7
SHMT2-224ENST00000556737 VANGL2Q9ULK5 521 aa10.65□□□□□ -0.7
SHMT2-224ENST00000556737 PLA2G4CQ9UP65 541 aa10.65□□□□□ -0.7
SHMT2-224ENST00000556737 ERVW-1Q9UQF0 538 aa10.65□□□□□ -0.7
SHMT2-224ENST00000556737 OR51B4Q9Y5P0 310 aa10.65□□□□□ -0.7
SHMT2-224ENST00000556737 SNX10Q9Y5X0 201 aa10.65□□□□□ -0.7
SHMT2-224ENST00000556737 TTC34A8MYJ7 566 aa10.64□□□□□ -0.71
SHMT2-224ENST00000556737 TEX33O43247 280 aa10.64□□□□□ -0.71
SHMT2-224ENST00000556737 CBFA2T2O43439 604 aa10.64□□□□□ -0.71
SHMT2-224ENST00000556737 SIN3BO75182 1162 aa10.64□□□□□ -0.71
SHMT2-224ENST00000556737 CNTN5O94779 1100 aa10.64□□□□□ -0.71
SHMT2-224ENST00000556737 GJB6O95452 261 aa10.64□□□□□ -0.71
SHMT2-224ENST00000556737 TPM3P06753 285 aa10.64□□□□□ -0.71
SHMT2-224ENST00000556737 SRPRAP08240 638 aaKnown RBP10.64□□□□□ -0.71
SHMT2-224ENST00000556737 PDGFRAP16234 1089 aa10.64□□□□□ -0.71
SHMT2-224ENST00000556737 DEKP35659 375 aaKnown RBP10.64□□□□□ -0.71
SHMT2-224ENST00000556737 DPP6P42658 865 aa10.64□□□□□ -0.71
SHMT2-224ENST00000556737 FANCCQ00597 558 aa10.64□□□□□ -0.71
SHMT2-224ENST00000556737 DEUP1Q05D60 604 aa10.64□□□□□ -0.71
SHMT2-224ENST00000556737 MTA1Q13330 715 aa10.64□□□□□ -0.71
SHMT2-224ENST00000556737 SLC12A1Q13621 1099 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms