RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 KIAA1211LQ6NV74 962 aa17.61■□□□□ 0.41
PSEN1-217ENST00000556533 RWDD4Q6NW29 188 aaKnown RBP17.61■□□□□ 0.41
PSEN1-217ENST00000556533 SERPINA13PQ6UXR4 307 aa17.61■□□□□ 0.41
PSEN1-217ENST00000556533 TFAP2DQ7Z6R9 452 aa17.61■□□□□ 0.41
PSEN1-217ENST00000556533 KIAA0907Q7Z7F0 614 aaPredicted RBP17.61■□□□□ 0.41
PSEN1-217ENST00000556533 LMLNQ96KR4 655 aa17.61■□□□□ 0.41
PSEN1-217ENST00000556533 CCDC42Q96M95 316 aa17.61■□□□□ 0.41
PSEN1-217ENST00000556533 CHP1Q99653 195 aa17.61■□□□□ 0.41
PSEN1-217ENST00000556533 TPSD1Q9BZJ3 242 aa17.61■□□□□ 0.41
PSEN1-217ENST00000556533 MPP6Q9NZW5 540 aa17.61■□□□□ 0.41
PSEN1-217ENST00000556533 OR12D3Q9UGF7 316 aa17.61■□□□□ 0.41
PSEN1-217ENST00000556533 HRO43593 1189 aa17.6■□□□□ 0.41
PSEN1-217ENST00000556533 SYNCRIPO60506 623 aaKnown RBP17.6■□□□□ 0.41
PSEN1-217ENST00000556533 CLDN11O75508 207 aa17.6■□□□□ 0.41
PSEN1-217ENST00000556533 MZF1P28698 734 aaPredicted RBP17.6■□□□□ 0.41
PSEN1-217ENST00000556533 GALCP54803 685 aa17.6■□□□□ 0.41
PSEN1-217ENST00000556533 CDH4P55283 916 aa17.6■□□□□ 0.41
PSEN1-217ENST00000556533 STARD3Q14849 445 aa17.6■□□□□ 0.41
PSEN1-217ENST00000556533 LPAL2Q16609 132 aa17.6■□□□□ 0.41
PSEN1-217ENST00000556533 ACBD5Q5T8D3 534 aaPredicted RBP17.6■□□□□ 0.41
PSEN1-217ENST00000556533 RNF219Q5W0B1 726 aaPredicted RBP17.6■□□□□ 0.41
PSEN1-217ENST00000556533 PRR23BQ6ZRT6 265 aa17.6■□□□□ 0.41
PSEN1-217ENST00000556533 CEP68Q76N32 757 aa17.6■□□□□ 0.41
PSEN1-217ENST00000556533 SLFN11Q7Z7L1 901 aa17.6■□□□□ 0.41
PSEN1-217ENST00000556533 ZNF683Q8IZ20 524 aa17.6■□□□□ 0.41
PSEN1-217ENST00000556533 APCDD1Q8J025 514 aa17.6■□□□□ 0.41
PSEN1-217ENST00000556533 MRFAP1L1Q96HT8 127 aa17.6■□□□□ 0.41
PSEN1-217ENST00000556533 GABRG3Q99928 467 aa17.6■□□□□ 0.41
PSEN1-217ENST00000556533 NHEJ1Q9H9Q4 299 aaPredicted RBP17.6■□□□□ 0.41
PSEN1-217ENST00000556533 EBF1Q9UH73 591 aa17.6■□□□□ 0.41
PSEN1-217ENST00000556533 PCSK1NQ9UHG2 260 aa17.6■□□□□ 0.41
PSEN1-217ENST00000556533 INTS6Q9UL03 887 aaKnown RBP17.6■□□□□ 0.41
PSEN1-217ENST00000556533 CACNA1IQ9P0X4 2223 aa17.6■□□□□ 0.41
PSEN1-217ENST00000556533 A0A1W2PQF6 199 aa17.59■□□□□ 0.41
PSEN1-217ENST00000556533 DRGXA6NNA5 263 aa17.59■□□□□ 0.41
PSEN1-217ENST00000556533 FAM72CH0Y354 149 aa17.59■□□□□ 0.41
PSEN1-217ENST00000556533 NPC1O15118 1278 aa17.59■□□□□ 0.41
PSEN1-217ENST00000556533 LILRB5O75023 590 aa17.59■□□□□ 0.41
PSEN1-217ENST00000556533 RNF8O76064 485 aa17.59■□□□□ 0.41
PSEN1-217ENST00000556533 EPHX1P07099 455 aa17.59■□□□□ 0.41
PSEN1-217ENST00000556533 DLDP09622 509 aaKnown RBP17.59■□□□□ 0.41
PSEN1-217ENST00000556533 HLA-EP13747 358 aa17.59■□□□□ 0.41
PSEN1-217ENST00000556533 PRKCHP24723 683 aa17.59■□□□□ 0.41
PSEN1-217ENST00000556533 CTSOP43234 321 aaPredicted RBP17.59■□□□□ 0.41
PSEN1-217ENST00000556533 SIM2Q14190 667 aaPredicted RBP17.59■□□□□ 0.41
PSEN1-217ENST00000556533 ARID5BQ14865 1188 aa17.59■□□□□ 0.41
PSEN1-217ENST00000556533 SLC18A3Q16572 532 aa17.59■□□□□ 0.41
PSEN1-217ENST00000556533 C5orf22Q49AR2 442 aa17.59■□□□□ 0.41
PSEN1-217ENST00000556533 FAM72AQ5TYM5 149 aa17.59■□□□□ 0.41
PSEN1-217ENST00000556533 FAM72DQ6L9T8 149 aa17.59■□□□□ 0.41
PSEN1-217ENST00000556533 FAM72BQ86X60 149 aa17.59■□□□□ 0.41
PSEN1-217ENST00000556533 ZNF366Q8N895 744 aa17.59■□□□□ 0.41
PSEN1-217ENST00000556533 MDGA1Q8NFP4 955 aa17.59■□□□□ 0.41
PSEN1-217ENST00000556533 TTC17Q96AE7 1141 aa17.59■□□□□ 0.41
PSEN1-217ENST00000556533 ARHGEF26Q96DR7 871 aa17.59■□□□□ 0.41
PSEN1-217ENST00000556533 NUP85Q9BW27 656 aa17.59■□□□□ 0.41
PSEN1-217ENST00000556533 MUC3BQ9H195 1237 aa17.59■□□□□ 0.41
PSEN1-217ENST00000556533 OSBPL2Q9H1P3 480 aa17.59■□□□□ 0.41
PSEN1-217ENST00000556533 SSU72P8A0A1W2PR75 194 aa17.58■□□□□ 0.4
PSEN1-217ENST00000556533 RPP40O75818 363 aaKnown RBP17.58■□□□□ 0.4
PSEN1-217ENST00000556533 CYP1A2P05177 515 aa17.58■□□□□ 0.4
PSEN1-217ENST00000556533 RHOCP08134 193 aa17.58■□□□□ 0.4
PSEN1-217ENST00000556533 OR1E1P30953 314 aa17.58■□□□□ 0.4
PSEN1-217ENST00000556533 OXCT1P55809 520 aa17.58■□□□□ 0.4
PSEN1-217ENST00000556533 ST8SIA6P61647 398 aa17.58■□□□□ 0.4
PSEN1-217ENST00000556533 MAPK8IP2Q13387 824 aaPredicted RBP17.58■□□□□ 0.4
PSEN1-217ENST00000556533 SLC12A1Q13621 1099 aa17.58■□□□□ 0.4
PSEN1-217ENST00000556533 PTPRNQ16849 979 aa17.58■□□□□ 0.4
PSEN1-217ENST00000556533 PLEKHG6Q3KR16 790 aa17.58■□□□□ 0.4
PSEN1-217ENST00000556533 USP39Q53GS9 565 aaKnown RBP17.58■□□□□ 0.4
PSEN1-217ENST00000556533 EFHC2Q5JST6 749 aa17.58■□□□□ 0.4
PSEN1-217ENST00000556533 CXorf57Q6NSI4 855 aaKnown RBP17.58■□□□□ 0.4
PSEN1-217ENST00000556533 ALYREFQ86V81 257 aaKnown RBP17.58■□□□□ 0.4
PSEN1-217ENST00000556533 PYROXD2Q8N2H3 581 aa17.58■□□□□ 0.4
PSEN1-217ENST00000556533 ZYG11BQ9C0D3 744 aa17.58■□□□□ 0.4
PSEN1-217ENST00000556533 SLC6A17Q9H1V8 727 aa17.58■□□□□ 0.4
PSEN1-217ENST00000556533 SEMA4AQ9H3S1 761 aa17.58■□□□□ 0.4
PSEN1-217ENST00000556533 SPTLC3Q9NUV7 552 aa17.58■□□□□ 0.4
PSEN1-217ENST00000556533 GPATCH2LQ9NWQ4 482 aa17.58■□□□□ 0.4
PSEN1-217ENST00000556533 VPS28Q9UK41 221 aa17.58■□□□□ 0.4
PSEN1-217ENST00000556533 RAB23Q9ULC3 237 aa17.58■□□□□ 0.4
PSEN1-217ENST00000556533 ERVW-1Q9UQF0 538 aa17.58■□□□□ 0.4
PSEN1-217ENST00000556533 ATG2BQ96BY7 2078 aa17.57■□□□□ 0.4
PSEN1-217ENST00000556533 KIAA1549LQ6ZVL6 1849 aa17.57■□□□□ 0.4
PSEN1-217ENST00000556533 IGLV3-10A0A075B6K4 115 aa17.57■□□□□ 0.4
PSEN1-217ENST00000556533 CCDC163A0A0D9SF12 145 aa17.57■□□□□ 0.4
PSEN1-217ENST00000556533 PROB1E7EW31 1015 aa17.57■□□□□ 0.4
PSEN1-217ENST00000556533 DCLK1O15075 740 aa17.57■□□□□ 0.4
PSEN1-217ENST00000556533 CREB3O43889 395 aa17.57■□□□□ 0.4
PSEN1-217ENST00000556533 LMNAP02545 664 aaKnown RBP17.57■□□□□ 0.4
PSEN1-217ENST00000556533 ASLP04424 464 aa17.57■□□□□ 0.4
PSEN1-217ENST00000556533 H2AFZP0C0S5 128 aa17.57■□□□□ 0.4
PSEN1-217ENST00000556533 GABRG2P18507 467 aa17.57■□□□□ 0.4
PSEN1-217ENST00000556533 CNR2P34972 360 aa17.57■□□□□ 0.4
PSEN1-217ENST00000556533 ECT2LQ008S8 904 aa17.57■□□□□ 0.4
PSEN1-217ENST00000556533 ZNF252P-AS1Q0IIN9 211 aa17.57■□□□□ 0.4
PSEN1-217ENST00000556533 ASTE1Q2TB18 679 aaPredicted RBP17.57■□□□□ 0.4
PSEN1-217ENST00000556533 H2AFVQ71UI9 128 aa17.57■□□□□ 0.4
PSEN1-217ENST00000556533 ASCL5Q7RTU5 278 aa17.57■□□□□ 0.4
PSEN1-217ENST00000556533 RASSF3Q86WH2 238 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms