RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 IRAK1P51617 712 aa9.97□□□□□ -0.81
SRP54-210ENST00000556380 SEC13P55735 322 aa9.97□□□□□ -0.81
SRP54-210ENST00000556380 ATP11AP98196 1134 aa9.97□□□□□ -0.81
SRP54-210ENST00000556380 CSTF1Q05048 431 aaKnown RBP9.97□□□□□ -0.81
SRP54-210ENST00000556380 ZNF252P-AS1Q0IIN9 211 aa9.97□□□□□ -0.81
SRP54-210ENST00000556380 HSF5Q4G112 596 aaPredicted RBP9.97□□□□□ -0.81
SRP54-210ENST00000556380 FSCBQ5H9T9 825 aa9.97□□□□□ -0.81
SRP54-210ENST00000556380 C10orf76Q5T2E6 689 aa9.97□□□□□ -0.81
SRP54-210ENST00000556380 ALKBH5Q6P6C2 394 aaKnown RBP9.97□□□□□ -0.81
SRP54-210ENST00000556380 TSSK4Q6SA08 328 aa9.97□□□□□ -0.81
SRP54-210ENST00000556380 ADIPOR2Q86V24 386 aa9.97□□□□□ -0.81
SRP54-210ENST00000556380 CHSY1Q86X52 802 aa9.97□□□□□ -0.81
SRP54-210ENST00000556380 FAM131BQ86XD5 332 aa9.97□□□□□ -0.81
SRP54-210ENST00000556380 ALLCQ8N6M5 410 aa9.97□□□□□ -0.81
SRP54-210ENST00000556380 ARFGAP1Q8N6T3 406 aa9.97□□□□□ -0.81
SRP54-210ENST00000556380 FAM172AQ8WUF8 416 aa9.97□□□□□ -0.81
SRP54-210ENST00000556380 MCEEQ96PE7 176 aa9.97□□□□□ -0.81
SRP54-210ENST00000556380 ACOX2Q99424 681 aa9.97□□□□□ -0.81
SRP54-210ENST00000556380 CNPY3Q9BT09 278 aa9.97□□□□□ -0.81
SRP54-210ENST00000556380 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.97□□□□□ -0.81
SRP54-210ENST00000556380 TRIM7Q9C029 511 aa9.97□□□□□ -0.81
SRP54-210ENST00000556380 CD248Q9HCU0 757 aa9.97□□□□□ -0.81
SRP54-210ENST00000556380 ELOVL2Q9NXB9 296 aa9.97□□□□□ -0.81
SRP54-210ENST00000556380 TOR4AQ9NXH8 423 aa9.97□□□□□ -0.81
SRP54-210ENST00000556380 STIM2Q9P246 746 aa9.97□□□□□ -0.81
SRP54-210ENST00000556380 CNOT8Q9UFF9 292 aaKnown RBP9.97□□□□□ -0.81
SRP54-210ENST00000556380 PAXBP1Q9Y5B6 917 aa9.97□□□□□ -0.81
SRP54-210ENST00000556380 SNX10Q9Y5X0 201 aa9.97□□□□□ -0.81
SRP54-210ENST00000556380 OTOGLQ3ZCN5 2332 aa9.96□□□□□ -0.81
SRP54-210ENST00000556380 KIAA1549LQ6ZVL6 1849 aa9.96□□□□□ -0.81
SRP54-210ENST00000556380 F5H5T6 163 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 SGK1O00141 431 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 CCP110O43303 1012 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 TIMM44O43615 452 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 DXOO77932 396 aaKnown RBP9.96□□□□□ -0.82
SRP54-210ENST00000556380 LUC7L3O95232 432 aaKnown RBP9.96□□□□□ -0.82
SRP54-210ENST00000556380 KLF8O95600 359 aaPredicted RBP9.96□□□□□ -0.82
SRP54-210ENST00000556380 CYP1A2P05177 515 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 CD70P32970 193 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 NRG1Q02297 640 aaPredicted RBP9.96□□□□□ -0.82
SRP54-210ENST00000556380 NHLH1Q02575 133 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 GUCA2AQ02747 115 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 DMWDQ09019 674 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 SCAPQ12770 1279 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 LMAN2Q12907 356 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 ENPP2Q13822 863 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 SLC18A3Q16572 532 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 CCDC122Q5T0U0 273 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 ACBD5Q5T8D3 534 aaPredicted RBP9.96□□□□□ -0.82
SRP54-210ENST00000556380 EGFLAMQ63HQ2 1017 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 DCUN1D2Q6PH85 259 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 SND1Q7KZF4 910 aaKnown RBP eCLIP9.96□□□□□ -0.828e-6■□□□□ 9.2
SRP54-210ENST00000556380 ANKS1BQ7Z6G8 1248 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 VPS36Q86VN1 386 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 CNGA4Q8IV77 575 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 CYP4X1Q8N118 509 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 CCDC33Q8N5R6 958 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 TXNDC5Q8NBS9 432 aaKnown RBP9.96□□□□□ -0.82
SRP54-210ENST00000556380 ZBTB44Q8NCP5 570 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 FNIP1Q8TF40 1166 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 NTAN1Q96AB6 310 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 TTC17Q96AE7 1141 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 ALG14Q96F25 216 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 TRIM11Q96F44 468 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 REPIN1Q9BWE0 567 aaKnown RBP9.96□□□□□ -0.82
SRP54-210ENST00000556380 MAGEB5Q9BZ81 275 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 SIK2Q9H0K1 926 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 THAP2Q9H0W7 228 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 IRF2BPLQ9H1B7 796 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 OSBPL2Q9H1P3 480 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 NHEJ1Q9H9Q4 299 aaPredicted RBP9.96□□□□□ -0.82
SRP54-210ENST00000556380 ZDHHC4Q9NPG8 344 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 ABCB8Q9NUT2 735 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 THAP10Q9P2Z0 257 aaPredicted RBP9.96□□□□□ -0.82
SRP54-210ENST00000556380 ZNF212Q9UDV6 495 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 INTS6Q9UL03 887 aaKnown RBP9.96□□□□□ -0.82
SRP54-210ENST00000556380 VANGL2Q9ULK5 521 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 MMP17Q9ULZ9 603 aa9.96□□□□□ -0.82
SRP54-210ENST00000556380 PTPRZ1P23471 2315 aaPredicted RBP9.96□□□□□ -0.82
SRP54-210ENST00000556380 A0A1W2PQF6 199 aa9.95□□□□□ -0.82
SRP54-210ENST00000556380 FAM72CH0Y354 149 aa9.95□□□□□ -0.82
SRP54-210ENST00000556380 ST8SIA5O15466 376 aa9.95□□□□□ -0.82
SRP54-210ENST00000556380 LILRB5O75023 590 aa9.95□□□□□ -0.82
SRP54-210ENST00000556380 CNTN5O94779 1100 aa9.95□□□□□ -0.82
SRP54-210ENST00000556380 TPM1P09493 284 aa9.95□□□□□ -0.82
SRP54-210ENST00000556380 PABPC1P11940 636 aaKnown RBP9.95□□□□□ -0.82
SRP54-210ENST00000556380 NBL1P41271 181 aa9.95□□□□□ -0.82
SRP54-210ENST00000556380 PLK1P53350 603 aa9.95□□□□□ -0.82
SRP54-210ENST00000556380 GALCP54803 685 aa9.95□□□□□ -0.82
SRP54-210ENST00000556380 GFPT1Q06210 699 aaPredicted RBP9.95□□□□□ -0.82
SRP54-210ENST00000556380 DMC1Q14565 340 aa9.95□□□□□ -0.82
SRP54-210ENST00000556380 EIF4HQ15056 248 aaKnown RBP9.95□□□□□ -0.82
SRP54-210ENST00000556380 CDO1Q16878 200 aa9.95□□□□□ -0.82
SRP54-210ENST00000556380 FUT11Q495W5 492 aa9.95□□□□□ -0.82
SRP54-210ENST00000556380 ALFQ53S48 1182 aa9.95□□□□□ -0.82
SRP54-210ENST00000556380 RABGAP1LQ5R372 815 aa9.95□□□□□ -0.82
SRP54-210ENST00000556380 FAM72AQ5TYM5 149 aa9.95□□□□□ -0.82
SRP54-210ENST00000556380 MANEALQ5VSG8 457 aa9.95□□□□□ -0.82
SRP54-210ENST00000556380 TTC39BQ5VTQ0 682 aaPredicted RBP9.95□□□□□ -0.82
SRP54-210ENST00000556380 FAM72DQ6L9T8 149 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms