RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 PMS2P54278 862 aa3.72□□□□□ -1.81
SCFD1-218ENST00000556256 POLE2P56282 527 aa3.72□□□□□ -1.81
SCFD1-218ENST00000556256 GALEQ14376 348 aa3.72□□□□□ -1.81
SCFD1-218ENST00000556256 TDRD12Q587J7 1177 aaKnown RBP3.72□□□□□ -1.81
SCFD1-218ENST00000556256 ABLIM2Q6H8Q1 611 aa3.72□□□□□ -1.81
SCFD1-218ENST00000556256 ADAM5Q6NVV9 412 aa3.72□□□□□ -1.81
SCFD1-218ENST00000556256 SESTD1Q86VW0 696 aa3.72□□□□□ -1.81
SCFD1-218ENST00000556256 DGKHQ86XP1 1220 aa3.72□□□□□ -1.81
SCFD1-218ENST00000556256 WDR77Q9BQA1 342 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-218ENST00000556256 ABHD14AQ9BUJ0 271 aa3.72□□□□□ -1.81
SCFD1-218ENST00000556256 TBC1D23Q9NUY8 699 aa3.72□□□□□ -1.81
SCFD1-218ENST00000556256 ZNF212Q9UDV6 495 aa3.72□□□□□ -1.81
SCFD1-218ENST00000556256 BMPR1BO00238 502 aa3.71□□□□□ -1.82
SCFD1-218ENST00000556256 PRC1O43663 620 aa3.71□□□□□ -1.82
SCFD1-218ENST00000556256 CTNND1O60716 968 aaKnown RBP3.71□□□□□ -1.82
SCFD1-218ENST00000556256 ARP10275 920 aa3.71□□□□□ -1.82
SCFD1-218ENST00000556256 ZP1P60852 638 aa3.71□□□□□ -1.82
SCFD1-218ENST00000556256 TRAF2Q12933 501 aa3.71□□□□□ -1.82
SCFD1-218ENST00000556256 HLTFQ14527 1009 aaKnown RBP eCLIP3.71□□□□□ -1.82
SCFD1-218ENST00000556256 GRM3Q14832 879 aa3.71□□□□□ -1.82
SCFD1-218ENST00000556256 ENTPD8Q5MY95 495 aa3.71□□□□□ -1.82
SCFD1-218ENST00000556256 NOL8Q76FK4 1167 aaKnown RBP3.71□□□□□ -1.82
SCFD1-218ENST00000556256 CLASRPQ8N2M8 674 aaKnown RBP3.71□□□□□ -1.82
SCFD1-218ENST00000556256 OVCA2Q8WZ82 227 aa3.71□□□□□ -1.82
SCFD1-218ENST00000556256 DDX20Q9UHI6 824 aaKnown RBP3.71□□□□□ -1.82
SCFD1-218ENST00000556256 OGDHLQ9ULD0 1010 aa3.71□□□□□ -1.82
SCFD1-218ENST00000556256 WDR81Q562E7 1941 aa3.7□□□□□ -1.82
SCFD1-218ENST00000556256 ANTXRLA6NF34 631 aa3.7□□□□□ -1.82
SCFD1-218ENST00000556256 A6NNZ2 444 aa3.7□□□□□ -1.82
SCFD1-218ENST00000556256 M0QZQ0 153 aa3.7□□□□□ -1.82
SCFD1-218ENST00000556256 PPP6R2O75170 966 aa3.7□□□□□ -1.82
SCFD1-218ENST00000556256 PAK4O96013 591 aaPredicted RBP3.7□□□□□ -1.82
SCFD1-218ENST00000556256 MT-ND5P03915 603 aa3.7□□□□□ -1.82
SCFD1-218ENST00000556256 ITGB8P26012 769 aa3.7□□□□□ -1.82
SCFD1-218ENST00000556256 ATICP31939 592 aa3.7□□□□□ -1.82
SCFD1-218ENST00000556256 PMPCAQ10713 525 aa3.7□□□□□ -1.82
SCFD1-218ENST00000556256 GRSF1Q12849 480 aaKnown RBP eCLIP3.7□□□□□ -1.82
SCFD1-218ENST00000556256 SLC39A14Q15043 492 aa3.7□□□□□ -1.82
SCFD1-218ENST00000556256 PLCB4Q15147 1175 aa3.7□□□□□ -1.82
SCFD1-218ENST00000556256 CCSAPQ6IQ19 270 aaPredicted RBP3.7□□□□□ -1.82
SCFD1-218ENST00000556256 C8orf82Q6P1X6 216 aaPredicted RBP3.7□□□□□ -1.82
SCFD1-218ENST00000556256 Q6ZSV7 163 aa3.7□□□□□ -1.82
SCFD1-218ENST00000556256 CHST15Q7LFX5 561 aaPredicted RBP3.7□□□□□ -1.82
SCFD1-218ENST00000556256 SDR16C5Q8N3Y7 309 aa3.7□□□□□ -1.82
SCFD1-218ENST00000556256 PAQR4Q8N4S7 273 aaPredicted RBP3.7□□□□□ -1.82
SCFD1-218ENST00000556256 TMED6Q8WW62 240 aa3.7□□□□□ -1.82
SCFD1-218ENST00000556256 IGSF21Q96ID5 467 aa3.7□□□□□ -1.82
SCFD1-218ENST00000556256 POLDIP3Q9BY77 421 aaKnown RBP3.7□□□□□ -1.82
SCFD1-218ENST00000556256 CATSPERBQ9H7T0 1116 aa3.7□□□□□ -1.82
SCFD1-218ENST00000556256 PRDM16Q9HAZ2 1276 aa3.7□□□□□ -1.82
SCFD1-218ENST00000556256 ZNF287Q9HBT7 754 aa3.7□□□□□ -1.82
SCFD1-218ENST00000556256 PRDM11Q9NQV5 511 aa3.7□□□□□ -1.82
SCFD1-218ENST00000556256 C1orf112Q9NSG2 853 aa3.7□□□□□ -1.82
SCFD1-218ENST00000556256 DONSONQ9NYP3 566 aa3.7□□□□□ -1.82
SCFD1-218ENST00000556256 IGSF9Q9P2J2 1179 aa3.7□□□□□ -1.82
SCFD1-218ENST00000556256 SNED1Q8TER0 1413 aa3.7□□□□□ -1.82
SCFD1-218ENST00000556256 LIASO43766 372 aa3.69□□□□□ -1.82
SCFD1-218ENST00000556256 CNTN5O94779 1100 aa3.69□□□□□ -1.82
SCFD1-218ENST00000556256 LDLRP01130 860 aa3.69□□□□□ -1.82
SCFD1-218ENST00000556256 HRGP04196 525 aa3.69□□□□□ -1.82
SCFD1-218ENST00000556256 VEGFCP49767 419 aa3.69□□□□□ -1.82
SCFD1-218ENST00000556256 GPS1Q13098 491 aa3.69□□□□□ -1.82
SCFD1-218ENST00000556256 TRAF3Q13114 568 aa3.69□□□□□ -1.82
SCFD1-218ENST00000556256 FSCBQ5H9T9 825 aa3.69□□□□□ -1.82
SCFD1-218ENST00000556256 CCDC144NLQ6NUI1 221 aa3.69□□□□□ -1.82
SCFD1-218ENST00000556256 ZNF367Q7RTV3 350 aa3.69□□□□□ -1.82
SCFD1-218ENST00000556256 PMM1Q92871 262 aa3.69□□□□□ -1.82
SCFD1-218ENST00000556256 TIFAQ96CG3 184 aa3.69□□□□□ -1.82
SCFD1-218ENST00000556256 SNX22Q96L94 193 aa3.69□□□□□ -1.82
SCFD1-218ENST00000556256 C1QTNF5Q9BXJ0 243 aa3.69□□□□□ -1.82
SCFD1-218ENST00000556256 PCGF6Q9BYE7 350 aa3.69□□□□□ -1.82
SCFD1-218ENST00000556256 DDX21Q9NR30 783 aaKnown RBP eCLIP3.69□□□□□ -1.82
SCFD1-218ENST00000556256 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.69□□□□□ -1.82
SCFD1-218ENST00000556256 CCDC194A0A1B0GVG4 234 aa3.68□□□□□ -1.82
SCFD1-218ENST00000556256 NEURL1O76050 574 aa3.68□□□□□ -1.82
SCFD1-218ENST00000556256 KAT7O95251 611 aa3.68□□□□□ -1.82
SCFD1-218ENST00000556256 TGM2P21980 687 aa3.68□□□□□ -1.82
SCFD1-218ENST00000556256 CRIP2P52943 208 aaPredicted RBP3.68□□□□□ -1.82
SCFD1-218ENST00000556256 ILF3Q12906 894 aaKnown RBP eCLIP3.68□□□□□ -1.82
SCFD1-218ENST00000556256 ARHGAP29Q52LW3 1261 aa3.68□□□□□ -1.82
SCFD1-218ENST00000556256 TLDC1Q6P9B6 456 aa3.68□□□□□ -1.82
SCFD1-218ENST00000556256 RNF44Q7L0R7 432 aa3.68□□□□□ -1.82
SCFD1-218ENST00000556256 FJX1Q86VR8 437 aa3.68□□□□□ -1.82
SCFD1-218ENST00000556256 EXD3Q8N9H8 876 aa3.68□□□□□ -1.82
SCFD1-218ENST00000556256 DBF4BQ8NFT6 615 aa3.68□□□□□ -1.82
SCFD1-218ENST00000556256 APIPQ96GX9 242 aa3.68□□□□□ -1.82
SCFD1-218ENST00000556256 ZNF419Q96HQ0 510 aaPredicted RBP3.68□□□□□ -1.82
SCFD1-218ENST00000556256 CCDC136Q96JN2 1154 aa3.68□□□□□ -1.82
SCFD1-218ENST00000556256 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.68□□□□□ -1.82
SCFD1-218ENST00000556256 IL25Q9H293 177 aa3.68□□□□□ -1.82
SCFD1-218ENST00000556256 ARNT2Q9HBZ2 717 aa3.68□□□□□ -1.82
SCFD1-218ENST00000556256 ZBTB26Q9HCK0 441 aa3.68□□□□□ -1.82
SCFD1-218ENST00000556256 SLC52A1Q9NWF4 448 aa3.68□□□□□ -1.82
SCFD1-218ENST00000556256 CXorf65A6NEN9 183 aa3.67□□□□□ -1.82
SCFD1-218ENST00000556256 VWA5AO00534 786 aa3.67□□□□□ -1.82
SCFD1-218ENST00000556256 CCNT2O60583 730 aaKnown RBP3.67□□□□□ -1.82
SCFD1-218ENST00000556256 CAND2O75155 1236 aa3.67□□□□□ -1.82
SCFD1-218ENST00000556256 ZBED1O96006 694 aa3.67□□□□□ -1.82
SCFD1-218ENST00000556256 MYF5P13349 255 aa3.67□□□□□ -1.82
SCFD1-218ENST00000556256 TRIM27P14373 513 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms