RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 GDF9O60383 454 aa21.15■□□□□ 0.98
VTI1B-205ENST00000555543 ZNF806P0C7X5 589 aa21.15■□□□□ 0.98
VTI1B-205ENST00000555543 PDGFRAP16234 1089 aa21.15■□□□□ 0.98
VTI1B-205ENST00000555543 MZF1P28698 734 aaPredicted RBP21.15■□□□□ 0.98
VTI1B-205ENST00000555543 RDXP35241 583 aaKnown RBP21.15■□□□□ 0.98
VTI1B-205ENST00000555543 ID4P47928 161 aa21.15■□□□□ 0.98
VTI1B-205ENST00000555543 ATP11AP98196 1134 aa21.15■□□□□ 0.98
VTI1B-205ENST00000555543 RSPO4Q2I0M5 234 aaPredicted RBP21.15■□□□□ 0.98
VTI1B-205ENST00000555543 C15orf59Q2T9L4 293 aaPredicted RBP21.15■□□□□ 0.98
VTI1B-205ENST00000555543 PLEKHG6Q3KR16 790 aa21.15■□□□□ 0.98
VTI1B-205ENST00000555543 C5orf22Q49AR2 442 aa21.15■□□□□ 0.98
VTI1B-205ENST00000555543 ARTNQ5T4W7 220 aa21.15■□□□□ 0.98
VTI1B-205ENST00000555543 SH3PXD2AQ5TCZ1 1133 aa21.15■□□□□ 0.98
VTI1B-205ENST00000555543 TCEAL6Q6IPX3 200 aa21.15■□□□□ 0.98
VTI1B-205ENST00000555543 LPCAT2Q7L5N7 544 aa21.15■□□□□ 0.98
VTI1B-205ENST00000555543 FAM131BQ86XD5 332 aa21.15■□□□□ 0.98
VTI1B-205ENST00000555543 TMPRSS6Q8IU80 811 aa21.15■□□□□ 0.98
VTI1B-205ENST00000555543 OR52K2Q8NGK3 314 aa21.15■□□□□ 0.98
VTI1B-205ENST00000555543 RXFP2Q8WXD0 754 aa21.15■□□□□ 0.98
VTI1B-205ENST00000555543 TCEAL3Q969E4 200 aa21.15■□□□□ 0.98
VTI1B-205ENST00000555543 NUP205Q92621 2012 aa21.14■□□□□ 0.98
VTI1B-205ENST00000555543 C2CD4BA6NLJ0 364 aa21.14■□□□□ 0.97
VTI1B-205ENST00000555543 ZNF217O75362 1048 aa21.14■□□□□ 0.97
VTI1B-205ENST00000555543 CNTN5O94779 1100 aa21.14■□□□□ 0.97
VTI1B-205ENST00000555543 RPL6Q02878 288 aaKnown RBP21.14■□□□□ 0.97
VTI1B-205ENST00000555543 MTA1Q13330 715 aa21.14■□□□□ 0.97
VTI1B-205ENST00000555543 CDO1Q16878 200 aa21.14■□□□□ 0.97
VTI1B-205ENST00000555543 SKOR2Q2VWA4 1001 aaPredicted RBP21.14■□□□□ 0.97
VTI1B-205ENST00000555543 CCDC14Q49A88 953 aa21.14■□□□□ 0.97
VTI1B-205ENST00000555543 CYP2U1Q7Z449 544 aa21.14■□□□□ 0.97
VTI1B-205ENST00000555543 DEFB119Q8N690 84 aa21.14■□□□□ 0.97
VTI1B-205ENST00000555543 SIPA1Q96FS4 1042 aa21.14■□□□□ 0.97
VTI1B-205ENST00000555543 PRSS16Q9NQE7 514 aa21.14■□□□□ 0.97
VTI1B-205ENST00000555543 RXFP3Q9NSD7 469 aa21.14■□□□□ 0.97
VTI1B-205ENST00000555543 TAS2R14Q9NYV8 317 aa21.14■□□□□ 0.97
VTI1B-205ENST00000555543 USP36Q9P275 1121 aaKnown RBP21.14■□□□□ 0.97
VTI1B-205ENST00000555543 TCRBV5S1A1TA0A578 114 aa21.13■□□□□ 0.97
VTI1B-205ENST00000555543 ENDOD1O94919 500 aa21.13■□□□□ 0.97
VTI1B-205ENST00000555543 CAVIN2O95810 425 aa21.13■□□□□ 0.97
VTI1B-205ENST00000555543 ASLP04424 464 aa21.13■□□□□ 0.97
VTI1B-205ENST00000555543 CALB1P05937 261 aa21.13■□□□□ 0.97
VTI1B-205ENST00000555543 CCDC172P0C7W6 258 aa21.13■□□□□ 0.97
VTI1B-205ENST00000555543 PBX1P40424 430 aa21.13■□□□□ 0.97
VTI1B-205ENST00000555543 TPM4P67936 248 aa21.13■□□□□ 0.97
VTI1B-205ENST00000555543 C1QBPQ07021 282 aaKnown RBP21.13■□□□□ 0.97
VTI1B-205ENST00000555543 ALFQ53S48 1182 aa21.13■□□□□ 0.97
VTI1B-205ENST00000555543 METTL3Q86U44 580 aaKnown RBP21.13■□□□□ 0.97
VTI1B-205ENST00000555543 C3orf20Q8ND61 904 aa21.13■□□□□ 0.97
VTI1B-205ENST00000555543 OR2T3Q8NH03 318 aa21.13■□□□□ 0.97
VTI1B-205ENST00000555543 VPS45Q9NRW7 570 aa21.13■□□□□ 0.97
VTI1B-205ENST00000555543 DLL3Q9NYJ7 618 aa21.13■□□□□ 0.97
VTI1B-205ENST00000555543 ERVW-1Q9UQF0 538 aa21.13■□□□□ 0.97
VTI1B-205ENST00000555543 PAXBP1Q9Y5B6 917 aa21.13■□□□□ 0.97
VTI1B-205ENST00000555543 CACNA1AO00555 2505 aa21.13■□□□□ 0.97
VTI1B-205ENST00000555543 ATXN2Q99700 1313 aaKnown RBP21.12■□□□□ 0.97
VTI1B-205ENST00000555543 PRR5-ARHGAP8B1AHC4 643 aa21.12■□□□□ 0.97
VTI1B-205ENST00000555543 MOCS3O95396 460 aa21.12■□□□□ 0.97
VTI1B-205ENST00000555543 KRT3P12035 628 aa21.12■□□□□ 0.97
VTI1B-205ENST00000555543 SDC4P31431 198 aa21.12■□□□□ 0.97
VTI1B-205ENST00000555543 RFC1P35251 1148 aaPredicted RBP21.12■□□□□ 0.97
VTI1B-205ENST00000555543 STK19P49842 368 aaPredicted RBP21.12■□□□□ 0.97
VTI1B-205ENST00000555543 ARHGAP8P85298 464 aa21.12■□□□□ 0.97
VTI1B-205ENST00000555543 ASIC2Q16515 512 aa21.12■□□□□ 0.97
VTI1B-205ENST00000555543 SLC36A4Q6YBV0 504 aa21.12■□□□□ 0.97
VTI1B-205ENST00000555543 PRCCQ92733 491 aaPredicted RBP21.12■□□□□ 0.97
VTI1B-205ENST00000555543 ALG14Q96F25 216 aa21.12■□□□□ 0.97
VTI1B-205ENST00000555543 RPL10LQ96L21 214 aaKnown RBP21.12■□□□□ 0.97
VTI1B-205ENST00000555543 ITM2CQ9NQX7 267 aa21.12■□□□□ 0.97
VTI1B-205ENST00000555543 AIPL1Q9NZN9 384 aa21.12■□□□□ 0.97
VTI1B-205ENST00000555543 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.11■□□□□ 0.97
VTI1B-205ENST00000555543 TTC34A8MYJ7 566 aa21.11■□□□□ 0.97
VTI1B-205ENST00000555543 PATE3B3GLJ2 98 aa21.11■□□□□ 0.97
VTI1B-205ENST00000555543 GOLGA6L19H0YKK7 550 aa21.11■□□□□ 0.97
VTI1B-205ENST00000555543 AP5Z1O43299 807 aa21.11■□□□□ 0.97
VTI1B-205ENST00000555543 CLDN11O75508 207 aa21.11■□□□□ 0.97
VTI1B-205ENST00000555543 PTPN9P43378 593 aa21.11■□□□□ 0.97
VTI1B-205ENST00000555543 TPMTP51580 245 aa21.11■□□□□ 0.97
VTI1B-205ENST00000555543 PLK1P53350 603 aa21.11■□□□□ 0.97
VTI1B-205ENST00000555543 UBASH3AP57075 661 aa21.11■□□□□ 0.97
VTI1B-205ENST00000555543 ST8SIA6P61647 398 aa21.11■□□□□ 0.97
VTI1B-205ENST00000555543 ECT2LQ008S8 904 aa21.11■□□□□ 0.97
VTI1B-205ENST00000555543 SLC12A1Q13621 1099 aa21.11■□□□□ 0.97
VTI1B-205ENST00000555543 HNRNPA1L2Q32P51 320 aaKnown RBP21.11■□□□□ 0.97
VTI1B-205ENST00000555543 SPDYCQ5MJ68 293 aa21.11■□□□□ 0.97
VTI1B-205ENST00000555543 SFMBT2Q5VUG0 894 aa21.11■□□□□ 0.97
VTI1B-205ENST00000555543 LYSMD4Q5XG99 296 aa21.11■□□□□ 0.97
VTI1B-205ENST00000555543 ACAD10Q6JQN1 1059 aa21.11■□□□□ 0.97
VTI1B-205ENST00000555543 WDR59Q6PJI9 974 aa21.11■□□□□ 0.97
VTI1B-205ENST00000555543 ZNF571Q7Z3V5 609 aaPredicted RBP21.11■□□□□ 0.97
VTI1B-205ENST00000555543 DNAAF5Q86Y56 855 aa21.11■□□□□ 0.97
VTI1B-205ENST00000555543 SLC41A1Q8IVJ1 513 aa21.11■□□□□ 0.97
VTI1B-205ENST00000555543 MCOLN2Q8IZK6 566 aa21.11■□□□□ 0.97
VTI1B-205ENST00000555543 C12orf50Q8NA57 414 aaPredicted RBP21.11■□□□□ 0.97
VTI1B-205ENST00000555543 PIGKQ92643 395 aa21.11■□□□□ 0.97
VTI1B-205ENST00000555543 SELENOOQ9BVL4 669 aa21.11■□□□□ 0.97
VTI1B-205ENST00000555543 HAUS4Q9H6D7 363 aa21.11■□□□□ 0.97
VTI1B-205ENST00000555543 TMEM74BQ9NUR3 256 aa21.11■□□□□ 0.97
VTI1B-205ENST00000555543 SLCO3A1Q9UIG8 710 aa21.11■□□□□ 0.97
VTI1B-205ENST00000555543 OR51B4Q9Y5P0 310 aa21.11■□□□□ 0.97
VTI1B-205ENST00000555543 ITIH6Q6UXX5 1313 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms