RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 SERGEFQ9UGK8 458 aa5.96□□□□□ -1.46
CKS1BP1-201ENST00000555221 CNOT7Q9UIV1 285 aaKnown RBP5.96□□□□□ -1.46
CKS1BP1-201ENST00000555221 HSF4Q9ULV5 492 aa5.96□□□□□ -1.46
CKS1BP1-201ENST00000555221 EMSYQ7Z589 1322 aa5.96□□□□□ -1.46
CKS1BP1-201ENST00000555221 C16orf96A6NNT2 1141 aa5.95□□□□□ -1.46
CKS1BP1-201ENST00000555221 MCIDASD6RGH6 385 aa5.95□□□□□ -1.46
CKS1BP1-201ENST00000555221 SMIM22K7EJ46 135 aa5.95□□□□□ -1.46
CKS1BP1-201ENST00000555221 CYR61O00622 381 aa5.95□□□□□ -1.46
CKS1BP1-201ENST00000555221 USP12O75317 370 aa5.95□□□□□ -1.46
CKS1BP1-201ENST00000555221 AKR1A1P14550 325 aa5.95□□□□□ -1.46
CKS1BP1-201ENST00000555221 PKMP14618 531 aaKnown RBP5.95□□□□□ -1.46
CKS1BP1-201ENST00000555221 PRKCHP24723 683 aa5.95□□□□□ -1.46
CKS1BP1-201ENST00000555221 GPD2P43304 727 aa5.95□□□□□ -1.46
CKS1BP1-201ENST00000555221 MVDP53602 400 aa5.95□□□□□ -1.46
CKS1BP1-201ENST00000555221 ADPRHP54922 357 aa5.95□□□□□ -1.46
CKS1BP1-201ENST00000555221 NR1H2P55055 460 aa5.95□□□□□ -1.46
CKS1BP1-201ENST00000555221 ZNF362Q5T0B9 420 aaPredicted RBP5.95□□□□□ -1.46
CKS1BP1-201ENST00000555221 DHRS13Q6UX07 377 aa5.95□□□□□ -1.46
CKS1BP1-201ENST00000555221 ARHGEF25Q86VW2 580 aa5.95□□□□□ -1.46
CKS1BP1-201ENST00000555221 RFX6Q8HWS3 928 aa5.95□□□□□ -1.46
CKS1BP1-201ENST00000555221 SCN4BQ8IWT1 228 aa5.95□□□□□ -1.46
CKS1BP1-201ENST00000555221 PNLDC1Q8NA58 520 aaKnown RBP5.95□□□□□ -1.46
CKS1BP1-201ENST00000555221 RRP36Q96EU6 259 aaKnown RBP5.95□□□□□ -1.46
CKS1BP1-201ENST00000555221 ASB2Q96Q27 587 aa5.95□□□□□ -1.46
CKS1BP1-201ENST00000555221 CD180Q99467 661 aa5.95□□□□□ -1.46
CKS1BP1-201ENST00000555221 ACAD9Q9H845 621 aa5.95□□□□□ -1.46
CKS1BP1-201ENST00000555221 LMTK3Q96Q04 1460 aa5.95□□□□□ -1.46
CKS1BP1-201ENST00000555221 SH2D7A6NKC9 451 aaPredicted RBP5.94□□□□□ -1.46
CKS1BP1-201ENST00000555221 B4E171 279 aa5.94□□□□□ -1.46
CKS1BP1-201ENST00000555221 DSCR3O14972 297 aa5.94□□□□□ -1.46
CKS1BP1-201ENST00000555221 SYN3O14994 580 aa5.94□□□□□ -1.46
CKS1BP1-201ENST00000555221 PROP1O75360 226 aa5.94□□□□□ -1.46
CKS1BP1-201ENST00000555221 TULP3O75386 442 aa5.94□□□□□ -1.46
CKS1BP1-201ENST00000555221 CD4P01730 458 aa5.94□□□□□ -1.46
CKS1BP1-201ENST00000555221 ARSAP15289 507 aa5.94□□□□□ -1.46
CKS1BP1-201ENST00000555221 GSTM2P28161 218 aa5.94□□□□□ -1.46
CKS1BP1-201ENST00000555221 TACR3P29371 465 aa5.94□□□□□ -1.46
CKS1BP1-201ENST00000555221 TSPAN7P41732 249 aa5.94□□□□□ -1.46
CKS1BP1-201ENST00000555221 LMOD3Q0VAK6 560 aa5.94□□□□□ -1.46
CKS1BP1-201ENST00000555221 KLF10Q13118 480 aa5.94□□□□□ -1.46
CKS1BP1-201ENST00000555221 NFIL3Q16649 462 aa5.94□□□□□ -1.46
CKS1BP1-201ENST00000555221 AWAT1Q58HT5 328 aa5.94□□□□□ -1.46
CKS1BP1-201ENST00000555221 PRAMEF17Q5VTA0 474 aa5.94□□□□□ -1.46
CKS1BP1-201ENST00000555221 FCRLBQ6BAA4 426 aa5.94□□□□□ -1.46
CKS1BP1-201ENST00000555221 GALNT7Q86SF2 657 aa5.94□□□□□ -1.46
CKS1BP1-201ENST00000555221 GGNQ86UU5 652 aa5.94□□□□□ -1.46
CKS1BP1-201ENST00000555221 TMEM200AQ86VY9 491 aa5.94□□□□□ -1.46
CKS1BP1-201ENST00000555221 CHSY1Q86X52 802 aa5.94□□□□□ -1.46
CKS1BP1-201ENST00000555221 LSM14AQ8ND56 463 aaKnown RBP5.94□□□□□ -1.46
CKS1BP1-201ENST00000555221 GPR150Q8NGU9 434 aa5.94□□□□□ -1.46
CKS1BP1-201ENST00000555221 NOC3LQ8WTT2 800 aaKnown RBP5.94□□□□□ -1.46
CKS1BP1-201ENST00000555221 NCSTNQ92542 709 aa5.94□□□□□ -1.46
CKS1BP1-201ENST00000555221 HDAC2Q92769 488 aaKnown RBP5.94□□□□□ -1.46
CKS1BP1-201ENST00000555221 RNF125Q96EQ8 232 aa5.94□□□□□ -1.46
CKS1BP1-201ENST00000555221 RNFT2Q96EX2 444 aa5.94□□□□□ -1.46
CKS1BP1-201ENST00000555221 HDHD5Q9BXW7 423 aa5.94□□□□□ -1.46
CKS1BP1-201ENST00000555221 PAIP1Q9H074 479 aaKnown RBP5.94□□□□□ -1.46
CKS1BP1-201ENST00000555221 IRAK4Q9NWZ3 460 aa5.94□□□□□ -1.46
CKS1BP1-201ENST00000555221 ALKBH4Q9NXW9 302 aa5.94□□□□□ -1.46
CKS1BP1-201ENST00000555221 PKP3Q9Y446 797 aa5.94□□□□□ -1.46
CKS1BP1-201ENST00000555221 DMRT1Q9Y5R6 373 aa5.94□□□□□ -1.46
CKS1BP1-201ENST00000555221 KAT6AQ92794 2004 aa5.93□□□□□ -1.46
CKS1BP1-201ENST00000555221 LYL1P12980 280 aa5.93□□□□□ -1.46
CKS1BP1-201ENST00000555221 ATP1A3P13637 1013 aa5.93□□□□□ -1.46
CKS1BP1-201ENST00000555221 IDUAP35475 653 aa5.93□□□□□ -1.46
CKS1BP1-201ENST00000555221 ARHGAP8P85298 464 aa5.93□□□□□ -1.46
CKS1BP1-201ENST00000555221 GALNT2Q10471 571 aa5.93□□□□□ -1.46
CKS1BP1-201ENST00000555221 SIM2Q14190 667 aaPredicted RBP5.93□□□□□ -1.46
CKS1BP1-201ENST00000555221 PROSER3Q2NL68 480 aa5.93□□□□□ -1.46
CKS1BP1-201ENST00000555221 SLC9C2Q5TAH2 1124 aa5.93□□□□□ -1.46
CKS1BP1-201ENST00000555221 ACAD10Q6JQN1 1059 aa5.93□□□□□ -1.46
CKS1BP1-201ENST00000555221 MTFR2Q6P444 385 aa5.93□□□□□ -1.46
CKS1BP1-201ENST00000555221 ZNF474Q6S9Z5 364 aaPredicted RBP5.93□□□□□ -1.46
CKS1BP1-201ENST00000555221 PCSK4Q6UW60 755 aa5.93□□□□□ -1.46
CKS1BP1-201ENST00000555221 DSTYKQ6XUX3 929 aa5.93□□□□□ -1.46
CKS1BP1-201ENST00000555221 BRSK2Q8IWQ3 736 aa5.93□□□□□ -1.46
CKS1BP1-201ENST00000555221 VPS52Q8N1B4 723 aa5.93□□□□□ -1.46
CKS1BP1-201ENST00000555221 FAM47BQ8NA70 645 aa5.93□□□□□ -1.46
CKS1BP1-201ENST00000555221 OR52N4Q8NGI2 321 aa5.93□□□□□ -1.46
CKS1BP1-201ENST00000555221 ZCCHC10Q8TBK6 192 aa5.93□□□□□ -1.46
CKS1BP1-201ENST00000555221 ZFPM2Q8WW38 1151 aa5.93□□□□□ -1.46
CKS1BP1-201ENST00000555221 RFFLQ8WZ73 363 aa5.93□□□□□ -1.46
CKS1BP1-201ENST00000555221 KAT2BQ92831 832 aa5.93□□□□□ -1.46
CKS1BP1-201ENST00000555221 FUZQ9BT04 418 aa5.93□□□□□ -1.46
CKS1BP1-201ENST00000555221 GATA5Q9BWX5 397 aaPredicted RBP5.93□□□□□ -1.46
CKS1BP1-201ENST00000555221 AGXT2Q9BYV1 514 aa5.93□□□□□ -1.46
CKS1BP1-201ENST00000555221 SMC4Q9NTJ3 1288 aa5.93□□□□□ -1.46
CKS1BP1-201ENST00000555221 CYP46A1Q9Y6A2 500 aa5.93□□□□□ -1.46
CKS1BP1-201ENST00000555221 ITIH6Q6UXX5 1313 aa5.93□□□□□ -1.46
CKS1BP1-201ENST00000555221 CYP2A6P11509 494 aaPredicted RBP5.92□□□□□ -1.46
CKS1BP1-201ENST00000555221 AVPR2P30518 371 aa5.92□□□□□ -1.46
CKS1BP1-201ENST00000555221 ELLP55199 621 aaPredicted RBP5.92□□□□□ -1.46
CKS1BP1-201ENST00000555221 CASP6P55212 293 aa5.92□□□□□ -1.46
CKS1BP1-201ENST00000555221 TUBA4AP68366 448 aa5.92□□□□□ -1.46
CKS1BP1-201ENST00000555221 RPP30P78346 268 aaKnown RBP5.92□□□□□ -1.46
CKS1BP1-201ENST00000555221 CAMK1Q14012 370 aa5.92□□□□□ -1.46
CKS1BP1-201ENST00000555221 RBM44Q6ZP01 1051 aaKnown RBP5.92□□□□□ -1.46
CKS1BP1-201ENST00000555221 RTL10Q7L3V2 364 aa5.92□□□□□ -1.46
CKS1BP1-201ENST00000555221 MDGA2Q7Z553 956 aa5.92□□□□□ -1.46
CKS1BP1-201ENST00000555221 TFAP2DQ7Z6R9 452 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms