RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 SLC25A11Q02978 314 aaKnown RBP11.24□□□□□ -0.61
SHMT2-218ENST00000555213 ZNF211Q13398 564 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-218ENST00000555213 E2F5Q15329 346 aa11.24□□□□□ -0.61
SHMT2-218ENST00000555213 SIX1Q15475 284 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-218ENST00000555213 HADHQ16836 314 aaKnown RBP11.24□□□□□ -0.61
SHMT2-218ENST00000555213 FBXO43Q4G163 708 aa11.24□□□□□ -0.61
SHMT2-218ENST00000555213 DGKKQ5KSL6 1271 aa11.24□□□□□ -0.61
SHMT2-218ENST00000555213 LRRC38Q5VT99 294 aa11.24□□□□□ -0.61
SHMT2-218ENST00000555213 FBXL22Q6P050 247 aa11.24□□□□□ -0.61
SHMT2-218ENST00000555213 TXNDC11Q6PKC3 985 aa11.24□□□□□ -0.61
SHMT2-218ENST00000555213 PSTKQ8IV42 348 aaKnown RBP11.24□□□□□ -0.61
SHMT2-218ENST00000555213 ETFBKMTQ8IXQ9 262 aa11.24□□□□□ -0.61
SHMT2-218ENST00000555213 CCDC185Q8N715 623 aa11.24□□□□□ -0.61
SHMT2-218ENST00000555213 NAT16Q8N8M0 369 aa11.24□□□□□ -0.61
SHMT2-218ENST00000555213 NOA1Q8NC60 698 aaKnown RBP11.24□□□□□ -0.61
SHMT2-218ENST00000555213 PJA1Q8NG27 643 aa11.24□□□□□ -0.61
SHMT2-218ENST00000555213 TSC1Q92574 1164 aa11.24□□□□□ -0.61
SHMT2-218ENST00000555213 PEBP4Q96S96 227 aa11.24□□□□□ -0.61
SHMT2-218ENST00000555213 PRMT1Q99873 361 aaKnown RBP11.24□□□□□ -0.61
SHMT2-218ENST00000555213 MAGEB5Q9BZ81 275 aa11.24□□□□□ -0.61
SHMT2-218ENST00000555213 OSBPL2Q9H1P3 480 aa11.24□□□□□ -0.61
SHMT2-218ENST00000555213 CARD9Q9H257 536 aa11.24□□□□□ -0.61
SHMT2-218ENST00000555213 EPHX3Q9H6B9 360 aa11.24□□□□□ -0.61
SHMT2-218ENST00000555213 PLK2Q9NYY3 685 aa11.24□□□□□ -0.61
SHMT2-218ENST00000555213 STIM2Q9P246 746 aa11.24□□□□□ -0.61
SHMT2-218ENST00000555213 RNF14Q9UBS8 474 aa11.24□□□□□ -0.61
SHMT2-218ENST00000555213 OR12D3Q9UGF7 316 aa11.24□□□□□ -0.61
SHMT2-218ENST00000555213 PCSK1NQ9UHG2 260 aa11.24□□□□□ -0.61
SHMT2-218ENST00000555213 USP18Q9UMW8 372 aa11.24□□□□□ -0.61
SHMT2-218ENST00000555213 AP4E1Q9UPM8 1137 aa11.24□□□□□ -0.61
SHMT2-218ENST00000555213 C5orf42Q9H799 3197 aa11.24□□□□□ -0.61
SHMT2-218ENST00000555213 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.23□□□□□ -0.61
SHMT2-218ENST00000555213 TCRBV7S2A1N4TA0A589 114 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 TBC1D3BA6NDS4 549 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 FAM170BA6NMN3 283 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 E9PAM4 449 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 H0Y626 953 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 GFRA2O00451 464 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 SPOPO43791 374 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 CEP104O60308 925 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 CLDN11O75508 207 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 LUC7L3O95232 432 aaKnown RBP11.23□□□□□ -0.61
SHMT2-218ENST00000555213 KAT7O95251 611 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 CD72P21854 359 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 HTR7P34969 479 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 GGCXP38435 758 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 GALK1P51570 392 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 ZNF135P52742 658 aaPredicted RBP11.23□□□□□ -0.61
SHMT2-218ENST00000555213 RWDD2BP57060 319 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 RPS24P62847 133 aaKnown RBP11.23□□□□□ -0.61
SHMT2-218ENST00000555213 NRG1Q02297 640 aaPredicted RBP11.23□□□□□ -0.61
SHMT2-218ENST00000555213 ZNF177Q13360 481 aaPredicted RBP11.23□□□□□ -0.61
SHMT2-218ENST00000555213 TAZQ16635 292 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 GAB4Q2WGN9 574 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 BOLA3Q53S33 107 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 TMEM196Q5HYL7 178 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 TMEM31Q5JXX7 168 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 IER5LQ5T953 404 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 CHST9Q7L1S5 443 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 C12orf40Q86WS4 652 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 RHOT1Q8IXI2 618 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 KATNAL2Q8IYT4 538 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 CFAP52Q8N1V2 620 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 SYNPOQ8N3V7 929 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 CARNMT1Q8N4J0 409 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 FBXL6Q8N531 539 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 CEP112Q8N8E3 955 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 TERB1Q8NA31 727 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 SPATA4Q8NEY3 305 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 WFIKKN2Q8TEU8 576 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 RAPGEF5Q92565 580 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 TBC1D31Q96DN5 1066 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 CHFRQ96EP1 664 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 IER2Q9BTL4 223 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 FOXQ1Q9C009 403 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 ZYG11BQ9C0D3 744 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 DONSONQ9NYP3 566 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 FZD10Q9ULW2 581 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 SLC27A6Q9Y2P4 619 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 SIT1Q9Y3P8 196 aa11.23□□□□□ -0.61
SHMT2-218ENST00000555213 PRR33A8MZF0 331 aa11.22□□□□□ -0.61
SHMT2-218ENST00000555213 FGF10O15520 208 aaPredicted RBP11.22□□□□□ -0.61
SHMT2-218ENST00000555213 PSTPIP1O43586 416 aa11.22□□□□□ -0.61
SHMT2-218ENST00000555213 KRT7P08729 469 aa11.22□□□□□ -0.61
SHMT2-218ENST00000555213 AOC1P19801 751 aa11.22□□□□□ -0.61
SHMT2-218ENST00000555213 IL4RP24394 825 aa11.22□□□□□ -0.61
SHMT2-218ENST00000555213 TARSP26639 723 aaKnown RBP11.22□□□□□ -0.61
SHMT2-218ENST00000555213 L1CAMP32004 1257 aa11.22□□□□□ -0.61
SHMT2-218ENST00000555213 GJC1P36383 396 aa11.22□□□□□ -0.61
SHMT2-218ENST00000555213 SGSHP51688 502 aa11.22□□□□□ -0.61
SHMT2-218ENST00000555213 CLCN5P51795 746 aa11.22□□□□□ -0.61
SHMT2-218ENST00000555213 CDH4P55283 916 aa11.22□□□□□ -0.61
SHMT2-218ENST00000555213 TPI1P60174 286 aa11.22□□□□□ -0.61
SHMT2-218ENST00000555213 ADCY2Q08462 1091 aa11.22□□□□□ -0.61
SHMT2-218ENST00000555213 EIF4HQ15056 248 aaKnown RBP11.22□□□□□ -0.61
SHMT2-218ENST00000555213 ERCC6LQ2NKX8 1250 aa11.22□□□□□ -0.61
SHMT2-218ENST00000555213 ZFYVE27Q5T4F4 411 aa11.22□□□□□ -0.61
SHMT2-218ENST00000555213 C6orf118Q5T5N4 469 aa11.22□□□□□ -0.61
SHMT2-218ENST00000555213 ERMARDQ5T6L9 678 aa11.22□□□□□ -0.61
SHMT2-218ENST00000555213 CWF19L1Q69YN2 538 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms