RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 KPNB1Q14974 876 aaKnown RBP5.87□□□□□ -1.47
VRK1-203ENST00000555067 NEK10Q6ZWH5 1172 aa5.87□□□□□ -1.47
VRK1-203ENST00000555067 CPOQ8IVL8 374 aa5.87□□□□□ -1.47
VRK1-203ENST00000555067 SDR16C5Q8N3Y7 309 aa5.87□□□□□ -1.47
VRK1-203ENST00000555067 LSMEM1Q8N8F7 131 aa5.87□□□□□ -1.47
VRK1-203ENST00000555067 IGFBPL1Q8WX77 278 aa5.87□□□□□ -1.47
VRK1-203ENST00000555067 RILPL2Q969X0 211 aa5.87□□□□□ -1.47
VRK1-203ENST00000555067 LYZL4Q96KX0 146 aa5.87□□□□□ -1.47
VRK1-203ENST00000555067 NUDT16L1Q9BRJ7 211 aaKnown RBP5.87□□□□□ -1.47
VRK1-203ENST00000555067 HELLSQ9NRZ9 838 aa5.87□□□□□ -1.47
VRK1-203ENST00000555067 ARL8BQ9NVJ2 186 aa5.87□□□□□ -1.47
VRK1-203ENST00000555067 IRAK4Q9NWZ3 460 aa5.87□□□□□ -1.47
VRK1-203ENST00000555067 MAN2B2Q9Y2E5 1009 aa5.87□□□□□ -1.47
VRK1-203ENST00000555067 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.87□□□□□ -1.47
VRK1-203ENST00000555067 COL15A1P39059 1388 aa5.87□□□□□ -1.47
VRK1-203ENST00000555067 B4DGG1 531 aa5.86□□□□□ -1.47
VRK1-203ENST00000555067 PLOD3O60568 738 aa5.86□□□□□ -1.47
VRK1-203ENST00000555067 PRAMEF2O60811 474 aa5.86□□□□□ -1.47
VRK1-203ENST00000555067 CRYABP02511 175 aaKnown RBP5.86□□□□□ -1.47
VRK1-203ENST00000555067 KRT20P35900 424 aa5.86□□□□□ -1.47
VRK1-203ENST00000555067 CPA2P48052 419 aa5.86□□□□□ -1.47
VRK1-203ENST00000555067 MTX1Q13505 466 aa5.86□□□□□ -1.47
VRK1-203ENST00000555067 PTK2BQ14289 1009 aa5.86□□□□□ -1.47
VRK1-203ENST00000555067 KCNAB1Q14722 419 aa5.86□□□□□ -1.47
VRK1-203ENST00000555067 MANEALQ5VSG8 457 aa5.86□□□□□ -1.47
VRK1-203ENST00000555067 DSTYKQ6XUX3 929 aa5.86□□□□□ -1.47
VRK1-203ENST00000555067 ZNF793Q6ZN11 406 aa5.86□□□□□ -1.47
VRK1-203ENST00000555067 COLCA1Q6ZS62 124 aa5.86□□□□□ -1.47
VRK1-203ENST00000555067 UNC13DQ70J99 1090 aa5.86□□□□□ -1.47
VRK1-203ENST00000555067 GET4Q7L5D6 327 aaPredicted RBP5.86□□□□□ -1.47
VRK1-203ENST00000555067 P3H2Q8IVL5 708 aa5.86□□□□□ -1.47
VRK1-203ENST00000555067 MBD3L2Q8NHZ7 208 aaPredicted RBP5.86□□□□□ -1.47
VRK1-203ENST00000555067 UCMAQ8WVF2 138 aa5.86□□□□□ -1.47
VRK1-203ENST00000555067 RRP36Q96EU6 259 aaKnown RBP5.86□□□□□ -1.47
VRK1-203ENST00000555067 AP1M1Q9BXS5 423 aa5.86□□□□□ -1.47
VRK1-203ENST00000555067 FAM234AQ9H0X4 552 aa5.86□□□□□ -1.47
VRK1-203ENST00000555067 SH3GLB2Q9NR46 395 aa5.86□□□□□ -1.47
VRK1-203ENST00000555067 SEMA5BQ9P283 1151 aa5.86□□□□□ -1.47
VRK1-203ENST00000555067 KIF17Q9P2E2 1029 aa5.86□□□□□ -1.47
VRK1-203ENST00000555067 AASSQ9UDR5 926 aa5.86□□□□□ -1.47
VRK1-203ENST00000555067 ZNF212Q9UDV6 495 aa5.86□□□□□ -1.47
VRK1-203ENST00000555067 HPSEQ9Y251 543 aa5.86□□□□□ -1.47
VRK1-203ENST00000555067 FSD2A1L4K1 749 aa5.85□□□□□ -1.47
VRK1-203ENST00000555067 HNRNPDLO14979 420 aaKnown RBP5.85□□□□□ -1.47
VRK1-203ENST00000555067 PLAUP00749 431 aa5.85□□□□□ -1.47
VRK1-203ENST00000555067 ALPLP05186 524 aa5.85□□□□□ -1.47
VRK1-203ENST00000555067 HTR7P34969 479 aa5.85□□□□□ -1.47
VRK1-203ENST00000555067 B4GALNT1Q00973 533 aa5.85□□□□□ -1.47
VRK1-203ENST00000555067 DNASE1L3Q13609 305 aa5.85□□□□□ -1.47
VRK1-203ENST00000555067 CCNG2Q16589 344 aa5.85□□□□□ -1.47
VRK1-203ENST00000555067 LIN54Q6MZP7 749 aa5.85□□□□□ -1.47
VRK1-203ENST00000555067 KIAA1161Q6NSJ0 714 aa5.85□□□□□ -1.47
VRK1-203ENST00000555067 FTSJ3Q8IY81 847 aaKnown RBP5.85□□□□□ -1.47
VRK1-203ENST00000555067 MMP21Q8N119 569 aa5.85□□□□□ -1.47
VRK1-203ENST00000555067 FSTL5Q8N475 847 aaPredicted RBP5.85□□□□□ -1.47
VRK1-203ENST00000555067 STT3BQ8TCJ2 826 aa5.85□□□□□ -1.47
VRK1-203ENST00000555067 BCAS4Q8TDM0 211 aa5.85□□□□□ -1.47
VRK1-203ENST00000555067 STYXQ8WUJ0 223 aa5.85□□□□□ -1.47
VRK1-203ENST00000555067 HTRA1Q92743 480 aa5.85□□□□□ -1.47
VRK1-203ENST00000555067 FAM227BQ96M60 508 aa5.85□□□□□ -1.47
VRK1-203ENST00000555067 PYM1Q9BRP8 204 aaKnown RBP5.85□□□□□ -1.47
VRK1-203ENST00000555067 OLA1Q9NTK5 396 aaKnown RBP5.85□□□□□ -1.47
VRK1-203ENST00000555067 NKIRAS2Q9NYR9 191 aa5.85□□□□□ -1.47
VRK1-203ENST00000555067 IGSF9Q9P2J2 1179 aa5.85□□□□□ -1.47
VRK1-203ENST00000555067 FAM234BA2RU67 622 aa5.84□□□□□ -1.47
VRK1-203ENST00000555067 SYNDIG1LA6NDD5 238 aa5.84□□□□□ -1.47
VRK1-203ENST00000555067 CA12O43570 354 aa5.84□□□□□ -1.47
VRK1-203ENST00000555067 WDR47O94967 919 aa5.84□□□□□ -1.47
VRK1-203ENST00000555067 TNFRSF6BO95407 300 aa5.84□□□□□ -1.47
VRK1-203ENST00000555067 TMIGD3P0DMS9 266 aaPredicted RBP5.84□□□□□ -1.47
VRK1-203ENST00000555067 HTR6P50406 440 aa5.84□□□□□ -1.47
VRK1-203ENST00000555067 DGKQP52824 942 aa5.84□□□□□ -1.47
VRK1-203ENST00000555067 SLC12A2P55011 1212 aa5.84□□□□□ -1.47
VRK1-203ENST00000555067 DCAF7P61962 342 aa5.84□□□□□ -1.47
VRK1-203ENST00000555067 WDR5P61964 334 aaKnown RBP5.84□□□□□ -1.47
VRK1-203ENST00000555067 DAB2IPQ5VWQ8 1189 aa5.84□□□□□ -1.47
VRK1-203ENST00000555067 FAM205BPQ63HN1 556 aa5.84□□□□□ -1.47
VRK1-203ENST00000555067 SULT6B1Q6IMI4 303 aa5.84□□□□□ -1.47
VRK1-203ENST00000555067 BEND5Q7L4P6 421 aa5.84□□□□□ -1.47
VRK1-203ENST00000555067 NKAIN3Q8N8D7 197 aa5.84□□□□□ -1.47
VRK1-203ENST00000555067 IPO4Q8TEX9 1081 aaKnown RBP5.84□□□□□ -1.47
VRK1-203ENST00000555067 WIPF2Q8TF74 440 aaPredicted RBP5.84□□□□□ -1.47
VRK1-203ENST00000555067 HERVK_113Q902F9 699 aa5.84□□□□□ -1.47
VRK1-203ENST00000555067 IQCDQ96DY2 449 aa5.84□□□□□ -1.47
VRK1-203ENST00000555067 SNX22Q96L94 193 aa5.84□□□□□ -1.47
VRK1-203ENST00000555067 FCRL5Q96RD9 977 aa5.84□□□□□ -1.47
VRK1-203ENST00000555067 GDF15Q99988 308 aa5.84□□□□□ -1.47
VRK1-203ENST00000555067 RNF26Q9BY78 433 aaPredicted RBP5.84□□□□□ -1.47
VRK1-203ENST00000555067 LMAN2LQ9H0V9 348 aa5.84□□□□□ -1.47
VRK1-203ENST00000555067 SRP68Q9UHB9 627 aaKnown RBP5.84□□□□□ -1.47
VRK1-203ENST00000555067 GPR34Q9UPC5 381 aa5.84□□□□□ -1.47
VRK1-203ENST00000555067 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.83□□□□□ -1.48
VRK1-203ENST00000555067 A0A1W2PPH5 198 aa5.83□□□□□ -1.48
VRK1-203ENST00000555067 C2CD4BA6NLJ0 364 aa5.83□□□□□ -1.48
VRK1-203ENST00000555067 RRHO14718 337 aa5.83□□□□□ -1.48
VRK1-203ENST00000555067 MT-ND5P03915 603 aa5.83□□□□□ -1.48
VRK1-203ENST00000555067 MYL4P12829 197 aa5.83□□□□□ -1.48
VRK1-203ENST00000555067 GLULP15104 373 aa5.83□□□□□ -1.48
VRK1-203ENST00000555067 GALNSP34059 522 aa5.83□□□□□ -1.48
VRK1-203ENST00000555067 SEMA3AQ14563 771 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms