RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 CES3Q6UWW8 571 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 DEF8Q6ZN54 512 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 ZCCHC7Q8N3Z6 543 aaKnown RBP7.01□□□□□ -1.29
SYNE2-216ENST00000555002 FAM98AQ8NCA5 519 aaKnown RBP7.01□□□□□ -1.29
SYNE2-216ENST00000555002 CNPY3Q9BT09 278 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 ATP13A1Q9HD20 1204 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 A0A0B4J269 797 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 PDXKO00764 312 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 FOXP2O15409 715 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 MYBL2P10244 700 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 PRKAR2AP13861 404 aaKnown RBP7.01□□□□□ -1.29
SYNE2-216ENST00000555002 IGFALSP35858 605 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 RAD23AP54725 363 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 BST2Q10589 180 aaKnown RBP7.01□□□□□ -1.29
SYNE2-216ENST00000555002 UBA2Q9UBT2 640 aaPredicted RBP7.01□□□□□ -1.29
SYNE2-216ENST00000555002 PLEKHG2Q9H7P9 1386 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 A0A075B6Q4 140 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 C1orf232A0A0U1RR37 186 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 TRDMT1O14717 391 aaKnown RBP7□□□□□ -1.29
SYNE2-216ENST00000555002 AKR1D1P51857 326 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 CENPCQ03188 943 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 GPSM1Q86YR5 675 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 MPP4Q96JB8 637 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 TIMM8BQ9Y5J9 83 aaPredicted RBP7□□□□□ -1.29
SYNE2-216ENST00000555002 HMGXB3Q12766 1538 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 INSRP06213 1382 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 NPHP4O75161 1426 aaPredicted RBP7□□□□□ -1.29
SYNE2-216ENST00000555002 CCDC85CA6NKD9 419 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 ATP9AO75110 1047 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 CSDE1O75534 798 aaKnown RBP7□□□□□ -1.29
SYNE2-216ENST00000555002 RHOBTB3O94955 611 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 THP07101 528 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 OR56A5P0C7T3 313 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 GALK1P51570 392 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 PLK1P53350 603 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 AQP5P55064 265 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 MC1RQ01726 317 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 HSF2Q03933 536 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 PPIL2Q13356 520 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 TRAPPC11Q7Z392 1133 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 FAM131BQ86XD5 332 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 GUF1Q8N442 669 aaKnown RBP7□□□□□ -1.29
SYNE2-216ENST00000555002 SLC4A11Q8NBS3 891 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 EFCAB1Q9HAE3 211 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 TBX20Q9UMR3 447 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 APC2O95996 2303 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 TRIM64BA6NI03 449 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 RASGRP1O95267 797 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 OR1E1P30953 314 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 COILP38432 576 aaPredicted RBP7□□□□□ -1.29
SYNE2-216ENST00000555002 PTPAQ15257 358 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 PPP1R26Q5T8A7 1209 aaPredicted RBP7□□□□□ -1.29
SYNE2-216ENST00000555002 RAP1GAP2Q684P5 730 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 MZT2BQ6NZ67 158 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 FAM9CQ8IZT9 166 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 FBXO39Q8N4B4 442 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 CCDC54Q8NEL0 328 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 CAPSLQ8WWF8 208 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 CCDC115Q96NT0 180 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 PPCSQ9HAB8 311 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 MYOZ2Q9NPC6 264 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 PXMP2Q9NR77 195 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 UBQLN1Q9UMX0 589 aaKnown RBP7□□□□□ -1.29
SYNE2-216ENST00000555002 FBXO21O94952 628 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 CES1P23141 567 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 ARFIP1P53367 373 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 MZT2AQ6P582 158 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 FBXO36Q8NEA4 188 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 PRCCQ92733 491 aaPredicted RBP7□□□□□ -1.29
SYNE2-216ENST00000555002 LRRC40Q9H9A6 602 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 SNX12Q9UMY4 172 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 ACLYP53396 1101 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 ZNF543Q08ER8 600 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 OVOS1Q6IE37 1185 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 IL27RAQ6UWB1 636 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 SAMD7Q7Z3H4 446 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 ADAM32Q8TC27 787 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 TRNT1Q96Q11 434 aaKnown RBP7□□□□□ -1.29
SYNE2-216ENST00000555002 SPATA9Q9BWV2 254 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 DGCR6LQ9BY27 220 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 LMAN2LQ9H0V9 348 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 ALDH8A1Q9H2A2 487 aaPredicted RBP7□□□□□ -1.29
SYNE2-216ENST00000555002 HAO1Q9UJM8 370 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 MAGEB3O15480 346 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 CHP2O43745 196 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 MASP1P48740 699 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 BCAT1P54687 386 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 PLA2G4EQ3MJ16 856 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 ABRAXAS1Q6UWZ7 409 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 JAZF1Q86VZ6 243 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 CCDC126Q96EE4 140 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 ARL15Q9NXU5 204 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 DPP7Q9UHL4 492 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 RAD54BQ9Y620 910 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 ATXN2Q99700 1313 aaKnown RBP7□□□□□ -1.29
SYNE2-216ENST00000555002 LAMC1P11047 1609 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 BTN3A1O00481 513 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 FDX1P10109 184 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 RAB25P57735 213 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 FASTKQ14296 549 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms