RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	COMMD10	Q9Y6G5	202 aa		5.97	□□□□□ -1.45
PSMC6-208	ENST00000554956	COL2A1	P02458	1487 aa	Predicted RBP	5.96	□□□□□ -1.45
PSMC6-208	ENST00000554956	MBD3L4	A6NDZ8	208 aa	Predicted RBP	5.96	□□□□□ -1.46
PSMC6-208	ENST00000554956	MBD3L3	A6NE82	208 aa	Predicted RBP	5.96	□□□□□ -1.46
PSMC6-208	ENST00000554956	GCOM1	H8Y6P7	765 aa	Predicted RBP	5.96	□□□□□ -1.46
PSMC6-208	ENST00000554956	CCER2	I3L3R5	266 aa		5.96	□□□□□ -1.46
PSMC6-208	ENST00000554956	SMIM22	K7EJ46	135 aa		5.96	□□□□□ -1.46
PSMC6-208	ENST00000554956	SURF6	O75683	361 aa	Known RBP	5.96	□□□□□ -1.46
PSMC6-208	ENST00000554956	GH2	P01242	217 aa		5.96	□□□□□ -1.46
PSMC6-208	ENST00000554956	UQCRFS1P1	P0C7P4	283 aa		5.96	□□□□□ -1.46
PSMC6-208	ENST00000554956	ENG	P17813	658 aa		5.96	□□□□□ -1.46
PSMC6-208	ENST00000554956	WT1	P19544	449 aa	Predicted RBP	5.96	□□□□□ -1.46
PSMC6-208	ENST00000554956	KLRC1	P26715	233 aa		5.96	□□□□□ -1.46
PSMC6-208	ENST00000554956	HOXA7	P31268	230 aa	Predicted RBP	5.96	□□□□□ -1.46
PSMC6-208	ENST00000554956	CYP2C18	P33260	490 aa		5.96	□□□□□ -1.46
PSMC6-208	ENST00000554956	ALDH9A1	P49189	494 aa		5.96	□□□□□ -1.46
PSMC6-208	ENST00000554956	PDE1A	P54750	535 aa		5.96	□□□□□ -1.46
PSMC6-208	ENST00000554956	OS9	Q13438	667 aa	Predicted RBP	5.96	□□□□□ -1.46
PSMC6-208	ENST00000554956	BRD3	Q15059	726 aa		5.96	□□□□□ -1.46
PSMC6-208	ENST00000554956	SAFB	Q15424	915 aa	Known RBP eCLIP	5.96	□□□□□ -1.46
PSMC6-208	ENST00000554956	TTC39A	Q5SRH9	613 aa		5.96	□□□□□ -1.46
PSMC6-208	ENST00000554956	DPY19L3	Q6ZPD9	716 aa		5.96	□□□□□ -1.46
PSMC6-208	ENST00000554956	SMC5	Q8IY18	1101 aa		5.96	□□□□□ -1.46
PSMC6-208	ENST00000554956	ABRA	Q8N0Z2	381 aa		5.96	□□□□□ -1.46
PSMC6-208	ENST00000554956	LRRC71	Q8N4P6	559 aa		5.96	□□□□□ -1.46
PSMC6-208	ENST00000554956	ACER1	Q8TDN7	264 aa		5.96	□□□□□ -1.46
PSMC6-208	ENST00000554956	XAGE5	Q8WWM1	108 aa		5.96	□□□□□ -1.46
PSMC6-208	ENST00000554956	GDF15	Q99988	308 aa		5.96	□□□□□ -1.46
PSMC6-208	ENST00000554956	HTATIP2	Q9BUP3	242 aa		5.96	□□□□□ -1.46
PSMC6-208	ENST00000554956	GPR108	Q9NPR9	543 aa		5.96	□□□□□ -1.46
PSMC6-208	ENST00000554956	HERC5	Q9UII4	1024 aa	Known RBP	5.96	□□□□□ -1.46
PSMC6-208	ENST00000554956	PFAS	O15067	1338 aa		5.96	□□□□□ -1.46
PSMC6-208	ENST00000554956	ZNF213	O14771	459 aa		5.95	□□□□□ -1.46
PSMC6-208	ENST00000554956	IPO8	O15397	1037 aa	Known RBP	5.95	□□□□□ -1.46
PSMC6-208	ENST00000554956	RASSF9	O75901	435 aa		5.95	□□□□□ -1.46
PSMC6-208	ENST00000554956	HNRNPC	P07910	306 aa	Known RBP eCLIP	5.95	□□□□□ -1.46
PSMC6-208	ENST00000554956	ASNS	P08243	561 aa		5.95	□□□□□ -1.46
PSMC6-208	ENST00000554956	CCND3	P30281	292 aa	Predicted RBP	5.95	□□□□□ -1.46
PSMC6-208	ENST00000554956	PLCD1	P51178	756 aa		5.95	□□□□□ -1.46
PSMC6-208	ENST00000554956	ITGA8	P53708	1063 aa		5.95	□□□□□ -1.46
PSMC6-208	ENST00000554956	KIAA1755	Q5JYT7	1200 aa		5.95	□□□□□ -1.46
PSMC6-208	ENST00000554956	CACHD1	Q5VU97	1274 aa		5.95	□□□□□ -1.46
PSMC6-208	ENST00000554956	ZKSCAN2	Q63HK3	967 aa		5.95	□□□□□ -1.46
PSMC6-208	ENST00000554956	SLC9A4	Q6AI14	798 aa		5.95	□□□□□ -1.46
PSMC6-208	ENST00000554956		Q7L0L9	218 aa		5.95	□□□□□ -1.46
PSMC6-208	ENST00000554956	FOXP4	Q8IVH2	680 aa	Predicted RBP	5.95	□□□□□ -1.46
PSMC6-208	ENST00000554956	GPRC5A	Q8NFJ5	357 aa		5.95	□□□□□ -1.46
PSMC6-208	ENST00000554956	DNAJB14	Q8TBM8	379 aa		5.95	□□□□□ -1.46
PSMC6-208	ENST00000554956	PPP1R9B	Q96SB3	815 aa		5.95	□□□□□ -1.46
PSMC6-208	ENST00000554956	PAGR1	Q9BTK6	254 aa		5.95	□□□□□ -1.46
PSMC6-208	ENST00000554956	DHX36	Q9H2U1	1008 aa	Known RBP	5.95	□□□□□ -1.46
PSMC6-208	ENST00000554956	ZSCAN32	Q9NX65	697 aa		5.95	□□□□□ -1.46
PSMC6-208	ENST00000554956	FLRT1	Q9NZU1	646 aa		5.95	□□□□□ -1.46
PSMC6-208	ENST00000554956	SERGEF	Q9UGK8	458 aa		5.95	□□□□□ -1.46
PSMC6-208	ENST00000554956	CDY1	Q9Y6F8	540 aa		5.95	□□□□□ -1.46
PSMC6-208	ENST00000554956	WNT6	Q9Y6F9	365 aa		5.95	□□□□□ -1.46
PSMC6-208	ENST00000554956	LAMA3	Q16787	3333 aa		5.95	□□□□□ -1.46
PSMC6-208	ENST00000554956		A0A1W2PRG0	241 aa		5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	C19orf81	C9J6K1	198 aa		5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956		F8W8V4	182 aa		5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	MASP2	O00187	686 aa		5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	SRGAP2	O75044	1071 aa		5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	IDH1	O75874	414 aa	Known RBP	5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	BAG3	O95817	575 aa		5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	C1R	P00736	705 aa		5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	CYP2D6	P10635	497 aa		5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	SHMT1	P34896	483 aa		5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	HTR3A	P46098	478 aa		5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	IRX3	P78415	501 aa	Predicted RBP	5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	LRRC26	Q2I0M4	334 aa		5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	CCDC158	Q5M9N0	1113 aa		5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	SYCP2L	Q5T4T6	812 aa		5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	TATDN1	Q6P1N9	297 aa		5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	CEP85	Q6P2H3	762 aa		5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	ZNF788	Q6ZQV5	615 aa		5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	GPR142	Q7Z601	462 aa		5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	IZUMO1	Q8IYV9	350 aa		5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	SLC44A5	Q8NCS7	719 aa		5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	TRPV1	Q8NER1	839 aa		5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	SOCS4	Q8WXH5	440 aa		5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	EDC3	Q96F86	508 aa	Known RBP	5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	MACROD1	Q9BQ69	325 aa		5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	RIOK1	Q9BRS2	568 aa	Known RBP	5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	C17orf80	Q9BSJ5	609 aa		5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	C11orf49	Q9H6J7	331 aa		5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	AS3MT	Q9HBK9	375 aa		5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	CHST12	Q9NRB3	414 aa		5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	DUSP22	Q9NRW4	184 aa		5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	TMOD4	Q9NZQ9	345 aa		5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	DNMT3B	Q9UBC3	853 aa	Known RBP	5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	PADI4	Q9UM07	663 aa		5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	CORO2B	Q9UQ03	480 aa		5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	SH2B3	Q9UQQ2	575 aa		5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	FAM50B	Q9Y247	325 aa		5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	EXOC6B	Q9Y2D4	811 aa		5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	PHIP	Q8WWQ0	1821 aa		5.94	□□□□□ -1.46
PSMC6-208	ENST00000554956	MYH2	Q9UKX2	1941 aa		5.93	□□□□□ -1.46
PSMC6-208	ENST00000554956	SIPA1L1	O43166	1804 aa		5.93	□□□□□ -1.46
PSMC6-208	ENST00000554956	LOC102723971	A0A1B0GUV8	181 aa		5.93	□□□□□ -1.46
PSMC6-208	ENST00000554956	QSOX1	O00391	747 aa		5.93	□□□□□ -1.46

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms