RNA–Protein interactions for RNA: ENST00000554877.1

CCDC85C-202, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-202ENST00000554877 HOXD12P35452 270 aa12.72□□□□□ -0.37
CCDC85C-202ENST00000554877 CSNK1EP49674 416 aaKnown RBP12.72□□□□□ -0.37
CCDC85C-202ENST00000554877 ZNF165P49910 485 aa12.72□□□□□ -0.37
CCDC85C-202ENST00000554877 SIM1P81133 766 aaPredicted RBP12.72□□□□□ -0.37
CCDC85C-202ENST00000554877 NNTQ13423 1086 aa12.72□□□□□ -0.37
CCDC85C-202ENST00000554877 ACCSLQ4AC99 568 aa12.72□□□□□ -0.37
CCDC85C-202ENST00000554877 PTPN20Q4JDL3 420 aa12.72□□□□□ -0.37
CCDC85C-202ENST00000554877 ZNF776Q68DI1 518 aaPredicted RBP12.72□□□□□ -0.37
CCDC85C-202ENST00000554877 LRSAM1Q6UWE0 723 aa12.72□□□□□ -0.37
CCDC85C-202ENST00000554877 ERICH1Q86X53 443 aa12.72□□□□□ -0.37
CCDC85C-202ENST00000554877 MMAAQ8IVH4 418 aaKnown RBP12.72□□□□□ -0.37
CCDC85C-202ENST00000554877 ZNF557Q8N988 423 aaPredicted RBP12.72□□□□□ -0.37
CCDC85C-202ENST00000554877 TTC17Q96AE7 1141 aa12.72□□□□□ -0.37
CCDC85C-202ENST00000554877 CAMK1GQ96NX5 476 aa12.72□□□□□ -0.37
CCDC85C-202ENST00000554877 RPRD1AQ96P16 312 aaPredicted RBP12.72□□□□□ -0.37
CCDC85C-202ENST00000554877 BTBD1Q9H0C5 482 aa12.72□□□□□ -0.37
CCDC85C-202ENST00000554877 CBX8Q9HC52 389 aa12.72□□□□□ -0.37
CCDC85C-202ENST00000554877 VANGL2Q9ULK5 521 aa12.72□□□□□ -0.37
CCDC85C-202ENST00000554877 PCDHGC3Q9UN70 934 aa12.72□□□□□ -0.37
CCDC85C-202ENST00000554877 PCDHB9Q9Y5E1 797 aa12.72□□□□□ -0.37
CCDC85C-202ENST00000554877 SNX10Q9Y5X0 201 aa12.72□□□□□ -0.37
CCDC85C-202ENST00000554877 ADAMTS9Q9P2N4 1935 aa12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 A0A1B0GVT2 93 aa12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 F8VZ95 297 aa12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 KCNK3O14649 394 aa12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 BCAT2O15382 392 aaPredicted RBP12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 TEX33O43247 280 aa12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 SH3BP5O60239 455 aa12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 ASLP04424 464 aa12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 TPM2P07951 284 aa12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 SLC2A3P11169 496 aa12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 CEACAM1P13688 526 aa12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 CSRP1P21291 193 aaKnown RBP12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 MZF1P28698 734 aaPredicted RBP12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 PMLP29590 882 aa12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 NNMTP40261 264 aa12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 PSMD8P48556 350 aa12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 STK19P49842 368 aaPredicted RBP12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 SULT1E1P49888 294 aa12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 ECT2LQ008S8 904 aa12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 CENPCQ03188 943 aa12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 TTC31Q49AM3 519 aaPredicted RBP12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 RABGAP1LQ5R372 815 aa12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 PEAR1Q5VY43 1037 aaPredicted RBP12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 FBXL22Q6P050 247 aa12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 BEND5Q7L4P6 421 aa12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 C14orf80Q86SX3 495 aa12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 CCAR2Q8N163 923 aaKnown RBP12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 STK40Q8N2I9 435 aa12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 TMEM35BQ8NCS4 154 aa12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 CADM4Q8NFZ8 388 aa12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 SETD7Q8WTS6 366 aaKnown RBP12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 CPA5Q8WXQ8 436 aa12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 IGSF8Q969P0 613 aa12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 LMLNQ96KR4 655 aa12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 SLC2A13Q96QE2 648 aa12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 OMDQ99983 421 aa12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 IL21RQ9HBE5 538 aa12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 RTN4Q9NQC3 1192 aaKnown RBP12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 FBXL12Q9NXK8 326 aa12.71□□□□□ -0.37
CCDC85C-202ENST00000554877 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.71□□□□□ -0.376e-6■■□□□ 12.6
CCDC85C-202ENST00000554877 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 A0A1B0GTH6 734 aa12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 A0A1W2PP55 124 aa12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 MID1O15344 667 aa12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 RNASEH2AO75792 299 aaKnown RBP12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 GFPT2O94808 682 aa12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 SEMA4FO95754 770 aa12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 GLI1P08151 1106 aa12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 CYP11B1P15538 503 aa12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 TFE3P19532 575 aaPredicted RBP12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 CDK11BP21127 795 aaKnown RBP12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 CDH5P33151 784 aaPredicted RBP12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 DEUP1Q05D60 604 aa12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 GRIK2Q13002 908 aa12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 ZNF177Q13360 481 aaPredicted RBP12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 AUHQ13825 339 aaKnown RBP12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 SYCP1Q15431 976 aa12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 NFKBIBQ15653 356 aa12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 SKOR2Q2VWA4 1001 aaPredicted RBP12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 FAM102AQ5T9C2 384 aaPredicted RBP12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 OLFML1Q6UWY5 402 aa12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 LAYNQ6UX15 382 aa12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 SND1Q7KZF4 910 aaKnown RBP eCLIP12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 ADAT2Q7Z6V5 191 aaKnown RBP12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 C18orf8Q96DM3 657 aa12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 MRGPRX3Q96LB0 322 aa12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 NAP1L5Q96NT1 182 aaPredicted RBP12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 STK33Q9BYT3 514 aa12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 IRX2Q9BZI1 471 aaPredicted RBP12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 NAT10Q9H0A0 1025 aaKnown RBP12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 NEUROG2Q9H2A3 272 aa12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 WDCPQ9H6R7 721 aa12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 GAREM1Q9H706 876 aa12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 NLRC4Q9NPP4 1024 aa12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 FAM207AQ9NSI2 230 aaPredicted RBP12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 ASNSD1Q9NWL6 643 aa12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 DAAM1Q9Y4D1 1078 aa12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 HS3ST4Q9Y661 456 aa12.7□□□□□ -0.38
CCDC85C-202ENST00000554877 SLCO1B1Q9Y6L6 691 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms