RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 PEX3P56589 373 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 OCRLQ01968 901 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 KRT17Q04695 432 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 RNASELQ05823 741 aaKnown RBP4.54□□□□□ -1.68
VTI1B-203ENST00000554636 CD69Q07108 199 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 GRIK3Q13003 919 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 PRPF4BQ13523 1007 aaKnown RBP4.54□□□□□ -1.68
VTI1B-203ENST00000554636 PPP2R5AQ15172 486 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 PTPAQ15257 358 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 TERF2Q15554 542 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 MAPK6Q16659 721 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 DCAF4L1Q3SXM0 396 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 BROXQ5VW32 411 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 KRT79Q5XKE5 535 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 ARL6IP4Q66PJ3 421 aaKnown RBP4.54□□□□□ -1.68
VTI1B-203ENST00000554636 RINT1Q6NUQ1 792 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 ANKRD54Q6NXT1 300 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 C1orf186Q6ZWK4 172 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 KIAA0907Q7Z7F0 614 aaPredicted RBP4.54□□□□□ -1.68
VTI1B-203ENST00000554636 ADHFE1Q8IWW8 467 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 HACE1Q8IYU2 909 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 VPS52Q8N1B4 723 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 UBR7Q8N806 425 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 CDYL2Q8N8U2 506 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 MRPL43Q8N983 215 aaKnown RBP4.54□□□□□ -1.68
VTI1B-203ENST00000554636 PIK3C3Q8NEB9 887 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 SLC22A17Q8WUG5 538 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 AUTS2Q8WXX7 1259 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 KIFAP3Q92845 792 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 SORCS2Q96PQ0 1159 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 APOL6Q9BWW8 343 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 S1PR5Q9H228 398 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 CXCL16Q9H2A7 254 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 EPHX3Q9H6B9 360 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 POLD4Q9HCU8 107 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 EMC7Q9NPA0 242 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 UBN1Q9NPG3 1134 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 MTMR6Q9Y217 621 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 FAM50BQ9Y247 325 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 PRG3Q9Y2Y8 225 aaPredicted RBP4.54□□□□□ -1.68
VTI1B-203ENST00000554636 REXO2Q9Y3B8 237 aaKnown RBP4.54□□□□□ -1.68
VTI1B-203ENST00000554636 USP15Q9Y4E8 981 aaPredicted RBP4.54□□□□□ -1.68
VTI1B-203ENST00000554636 CITO14578 2027 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 ZNF318Q5VUA4 2279 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 C2orf16Q68DN1 1984 aa4.54□□□□□ -1.68
VTI1B-203ENST00000554636 DOCK8Q8NF50 2099 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 MTCL1Q9Y4B5 1905 aaKnown RBP4.53□□□□□ -1.68
VTI1B-203ENST00000554636 A0A087X0B3 334 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 VPS37CA5D8V6 355 aaPredicted RBP4.53□□□□□ -1.68
VTI1B-203ENST00000554636 LOC730098B7Z3J9 87 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 CYR61O00622 381 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 FAM20BO75063 409 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 CXCL14O95715 111 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 BMP15O95972 392 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 PLA2G4BP0C869 781 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 GAAP10253 952 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 EPCAMP16422 314 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 PROZP22891 400 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 ID4P47928 161 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 NPTX2P47972 431 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 EFNA5P52803 228 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 HMGA2P52926 109 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 GYS2P54840 703 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 NCBP1Q09161 790 aaKnown RBP4.53□□□□□ -1.68
VTI1B-203ENST00000554636 MGAT5Q09328 741 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 DMP1Q13316 513 aaPredicted RBP4.53□□□□□ -1.68
VTI1B-203ENST00000554636 TUBA3CQ13748 450 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 NAB2Q15742 525 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 MAN2A1Q16706 1144 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 GAGE13Q4V321 117 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 ATP13A4Q4VNC1 1196 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 FUT10Q6P4F1 479 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 SLC27A1Q6PCB7 646 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 TUBA3EQ6PEY2 450 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 CXorf67Q86X51 503 aaPredicted RBP4.53□□□□□ -1.68
VTI1B-203ENST00000554636 GSPT2Q8IYD1 628 aaKnown RBP4.53□□□□□ -1.68
VTI1B-203ENST00000554636 CMTM4Q8IZR5 234 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 SYT2Q8N9I0 419 aaPredicted RBP4.53□□□□□ -1.68
VTI1B-203ENST00000554636 ZNF610Q8N9Z0 462 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 CACTINQ8WUQ7 758 aaKnown RBP4.53□□□□□ -1.68
VTI1B-203ENST00000554636 GAB3Q8WWW8 586 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 CASP10Q92851 521 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 USP7Q93009 1102 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 SNX21Q969T3 373 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 MIEF2Q96C03 454 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 IFT74Q96LB3 600 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 AK8Q96MA6 479 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 ZNF512Q96ME7 567 aaPredicted RBP4.53□□□□□ -1.68
VTI1B-203ENST00000554636 KLHL5Q96PQ7 755 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 FIZ1Q96SL8 496 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 PLIN2Q99541 437 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 PAAF1Q9BRP4 392 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 GPR87Q9BY21 358 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 TRIM6Q9C030 488 aaPredicted RBP4.53□□□□□ -1.68
VTI1B-203ENST00000554636 CDT1Q9H211 546 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 PTPRHQ9HD43 1115 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 SLC2A4RGQ9NR83 387 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 BLOC1S4Q9NUP1 217 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 CACNG4Q9UBN1 327 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 CDH22Q9UJ99 828 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms