RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 ARRDC3Q96B67 414 aa5.63□□□□□ -1.51
SCFD1-211ENST00000554437 ITM2CQ9NQX7 267 aa5.63□□□□□ -1.51
SCFD1-211ENST00000554437 TMEM45AQ9NWC5 275 aa5.63□□□□□ -1.51
SCFD1-211ENST00000554437 RCE1Q9Y256 329 aa5.63□□□□□ -1.51
SCFD1-211ENST00000554437 PCDHGB3Q9Y5G1 929 aa5.63□□□□□ -1.51
SCFD1-211ENST00000554437 FAM90A20PA6NIJ5 464 aa5.62□□□□□ -1.51
SCFD1-211ENST00000554437 GRM8O00222 908 aa5.62□□□□□ -1.51
SCFD1-211ENST00000554437 UGDHO60701 494 aa5.62□□□□□ -1.51
SCFD1-211ENST00000554437 CYP19A1P11511 503 aaPredicted RBP5.62□□□□□ -1.51
SCFD1-211ENST00000554437 CDK4P11802 303 aa5.62□□□□□ -1.51
SCFD1-211ENST00000554437 ARL4CP56559 192 aa5.62□□□□□ -1.51
SCFD1-211ENST00000554437 B4GALNT1Q00973 533 aa5.62□□□□□ -1.51
SCFD1-211ENST00000554437 KLF9Q13886 244 aaPredicted RBP5.62□□□□□ -1.51
SCFD1-211ENST00000554437 DCTN1Q14203 1278 aa5.62□□□□□ -1.51
SCFD1-211ENST00000554437 INO80DQ53TQ3 878 aaPredicted RBP5.62□□□□□ -1.51
SCFD1-211ENST00000554437 PAPD7Q5XG87 772 aaKnown RBP5.62□□□□□ -1.51
SCFD1-211ENST00000554437 ZNF793Q6ZN11 406 aa5.62□□□□□ -1.51
SCFD1-211ENST00000554437 ANKRD13BQ86YJ7 626 aa5.62□□□□□ -1.51
SCFD1-211ENST00000554437 SUGP1Q8IWZ8 645 aaKnown RBP5.62□□□□□ -1.51
SCFD1-211ENST00000554437 FTSJ3Q8IY81 847 aaKnown RBP5.62□□□□□ -1.51
SCFD1-211ENST00000554437 FSIP1Q8NA03 581 aa5.62□□□□□ -1.51
SCFD1-211ENST00000554437 OR52N4Q8NGI2 321 aa5.62□□□□□ -1.51
SCFD1-211ENST00000554437 ATP2A3Q93084 1043 aa5.62□□□□□ -1.51
SCFD1-211ENST00000554437 RILPL2Q969X0 211 aa5.62□□□□□ -1.51
SCFD1-211ENST00000554437 SDCCAG3Q96C92 435 aa5.62□□□□□ -1.51
SCFD1-211ENST00000554437 ADAD1Q96M93 576 aaKnown RBP5.62□□□□□ -1.51
SCFD1-211ENST00000554437 NPAS1Q99742 590 aa5.62□□□□□ -1.51
SCFD1-211ENST00000554437 ISCA1Q9BUE6 129 aa5.62□□□□□ -1.51
SCFD1-211ENST00000554437 CHODLQ9H9P2 273 aa5.62□□□□□ -1.51
SCFD1-211ENST00000554437 G6PC2Q9NQR9 355 aa5.62□□□□□ -1.51
SCFD1-211ENST00000554437 TRNAU1APQ9NX07 287 aaKnown RBP5.62□□□□□ -1.51
SCFD1-211ENST00000554437 TUBA8Q9NY65 449 aaPredicted RBP5.62□□□□□ -1.51
SCFD1-211ENST00000554437 MTMR4Q9NYA4 1195 aa5.62□□□□□ -1.51
SCFD1-211ENST00000554437 B9A039 149 aa5.61□□□□□ -1.51
SCFD1-211ENST00000554437 TLR2O60603 784 aa5.61□□□□□ -1.51
SCFD1-211ENST00000554437 NFATC1O95644 943 aa5.61□□□□□ -1.51
SCFD1-211ENST00000554437 TFRCP02786 760 aaKnown RBP5.61□□□□□ -1.51
SCFD1-211ENST00000554437 CENPBP07199 599 aaPredicted RBP5.61□□□□□ -1.51
SCFD1-211ENST00000554437 RXRAP19793 462 aa5.61□□□□□ -1.51
SCFD1-211ENST00000554437 CDK18Q07002 472 aa5.61□□□□□ -1.51
SCFD1-211ENST00000554437 ZRSR2Q15696 482 aaKnown RBP5.61□□□□□ -1.51
SCFD1-211ENST00000554437 ETFDHQ16134 617 aa5.61□□□□□ -1.51
SCFD1-211ENST00000554437 C10orf76Q5T2E6 689 aa5.61□□□□□ -1.51
SCFD1-211ENST00000554437 DEF8Q6ZN54 512 aa5.61□□□□□ -1.51
SCFD1-211ENST00000554437 MDGA2Q7Z553 956 aa5.61□□□□□ -1.51
SCFD1-211ENST00000554437 PAQR4Q8N4S7 273 aaPredicted RBP5.61□□□□□ -1.51
SCFD1-211ENST00000554437 NANOGP1Q8N7R0 232 aa5.61□□□□□ -1.51
SCFD1-211ENST00000554437 PTGR2Q8N8N7 351 aaPredicted RBP5.61□□□□□ -1.51
SCFD1-211ENST00000554437 ENDOVQ8N8Q3 282 aaKnown RBP5.61□□□□□ -1.51
SCFD1-211ENST00000554437 EXD3Q8N9H8 876 aa5.61□□□□□ -1.51
SCFD1-211ENST00000554437 SPPL3Q8TCT6 385 aa5.61□□□□□ -1.51
SCFD1-211ENST00000554437 KCNJ9Q92806 393 aa5.61□□□□□ -1.51
SCFD1-211ENST00000554437 SCLT1Q96NL6 688 aa5.61□□□□□ -1.51
SCFD1-211ENST00000554437 ZNF70Q9UC06 446 aaPredicted RBP5.61□□□□□ -1.51
SCFD1-211ENST00000554437 SLC25A13Q9UJS0 675 aa5.61□□□□□ -1.51
SCFD1-211ENST00000554437 TNFSF13BQ9Y275 285 aa5.61□□□□□ -1.51
SCFD1-211ENST00000554437 PCSK5Q92824 1860 aa5.6□□□□□ -1.51
SCFD1-211ENST00000554437 COL3A1P02461 1466 aaPredicted RBP5.6□□□□□ -1.51
SCFD1-211ENST00000554437 DPPA5A6NC42 116 aa5.6□□□□□ -1.51
SCFD1-211ENST00000554437 MCIDASD6RGH6 385 aa5.6□□□□□ -1.51
SCFD1-211ENST00000554437 F8W810 466 aa5.6□□□□□ -1.51
SCFD1-211ENST00000554437 SEPT4O43236 478 aa5.6□□□□□ -1.51
SCFD1-211ENST00000554437 SH3BP5O60239 455 aa5.6□□□□□ -1.51
SCFD1-211ENST00000554437 TK1P04183 234 aa5.6□□□□□ -1.51
SCFD1-211ENST00000554437 CHN1P15882 459 aa5.6□□□□□ -1.51
SCFD1-211ENST00000554437 MCM2P49736 904 aa5.6□□□□□ -1.51
SCFD1-211ENST00000554437 ZNF81P51508 661 aa5.6□□□□□ -1.51
SCFD1-211ENST00000554437 ADPRHP54922 357 aa5.6□□□□□ -1.51
SCFD1-211ENST00000554437 ACTR2P61160 394 aa5.6□□□□□ -1.51
SCFD1-211ENST00000554437 PGM5Q15124 567 aa5.6□□□□□ -1.51
SCFD1-211ENST00000554437 ARL13AQ5H913 290 aaPredicted RBP5.6□□□□□ -1.51
SCFD1-211ENST00000554437 PXDC1Q5TGL8 231 aa5.6□□□□□ -1.51
SCFD1-211ENST00000554437 SHC4Q6S5L8 630 aa5.6□□□□□ -1.51
SCFD1-211ENST00000554437 LRIG3Q6UXM1 1119 aa5.6□□□□□ -1.51
SCFD1-211ENST00000554437 ANKS1BQ7Z6G8 1248 aa5.6□□□□□ -1.51
SCFD1-211ENST00000554437 TMEM200AQ86VY9 491 aa5.6□□□□□ -1.51
SCFD1-211ENST00000554437 IGFBPL1Q8WX77 278 aa5.6□□□□□ -1.51
SCFD1-211ENST00000554437 TUBB6Q9BUF5 446 aa5.6□□□□□ -1.51
SCFD1-211ENST00000554437 HDHD5Q9BXW7 423 aa5.6□□□□□ -1.51
SCFD1-211ENST00000554437 TRIM31Q9BZY9 425 aa5.6□□□□□ -1.51
SCFD1-211ENST00000554437 ARHGAP39Q9C0H5 1083 aa5.6□□□□□ -1.51
SCFD1-211ENST00000554437 TWSG1Q9GZX9 223 aa5.6□□□□□ -1.51
SCFD1-211ENST00000554437 SPRTNQ9H040 489 aaPredicted RBP5.6□□□□□ -1.51
SCFD1-211ENST00000554437 CLPBQ9H078 707 aa5.6□□□□□ -1.51
SCFD1-211ENST00000554437 PLEKHA2Q9HB19 425 aa5.6□□□□□ -1.51
SCFD1-211ENST00000554437 TXNRD2Q9NNW7 524 aa5.6□□□□□ -1.51
SCFD1-211ENST00000554437 PAPOLBQ9NRJ5 636 aaKnown RBP5.6□□□□□ -1.51
SCFD1-211ENST00000554437 FEM1BQ9UK73 627 aa5.6□□□□□ -1.51
SCFD1-211ENST00000554437 FBXO4Q9UKT5 387 aa5.6□□□□□ -1.51
SCFD1-211ENST00000554437 ZMYM2Q9UBW7 1377 aa5.59□□□□□ -1.51
SCFD1-211ENST00000554437 TOP3BO95985 862 aaKnown RBP5.59□□□□□ -1.51
SCFD1-211ENST00000554437 FGBP02675 491 aa5.59□□□□□ -1.51
SCFD1-211ENST00000554437 PRPH2P23942 346 aa5.59□□□□□ -1.51
SCFD1-211ENST00000554437 CIITAP33076 1130 aa5.59□□□□□ -1.51
SCFD1-211ENST00000554437 ALKBH1Q13686 389 aaKnown RBP5.59□□□□□ -1.51
SCFD1-211ENST00000554437 RABEP1Q15276 862 aa5.59□□□□□ -1.51
SCFD1-211ENST00000554437 C10orf25Q5T742 122 aa5.59□□□□□ -1.51
SCFD1-211ENST00000554437 RTL10Q7L3V2 364 aa5.59□□□□□ -1.51
SCFD1-211ENST00000554437 RASGRP2Q7LDG7 609 aa5.59□□□□□ -1.51
SCFD1-211ENST00000554437 C2CD5Q86YS7 1000 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms