RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.78□□□□□ -1.16
LINC00640-201ENST00000554409 DOCK4Q8N1I0 1966 aa7.78□□□□□ -1.16
LINC00640-201ENST00000554409 PTPRZ1P23471 2315 aaPredicted RBP7.78□□□□□ -1.16
LINC00640-201ENST00000554409 ITIH6Q6UXX5 1313 aa7.78□□□□□ -1.16
LINC00640-201ENST00000554409 SYNJ2BP-COX16A0A087WUM0 186 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 A0A1B0GTH6 734 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 A0A1B0GVM2 712 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 A0A1W2PQC6 194 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 SYCE3A1L190 88 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 TCAF2A6NFQ2 919 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 H0Y626 953 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 TEX33O43247 280 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 SYNCRIPO60506 623 aaKnown RBP7.77□□□□□ -1.17
LINC00640-201ENST00000554409 ENDOD1O94919 500 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 MOCS3O95396 460 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 CAVIN2O95810 425 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 EPHX1P07099 455 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 CCDC172P0C7W6 258 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 FERP16591 822 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 POLR2EP19388 210 aaKnown RBP7.77□□□□□ -1.17
LINC00640-201ENST00000554409 TFE3P19532 575 aaPredicted RBP7.77□□□□□ -1.17
LINC00640-201ENST00000554409 HOXD12P35452 270 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 FLT3P36888 993 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 SULT1E1P49888 294 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 PLK1P53350 603 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 OXCT1P55809 520 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 CREB5Q02930 508 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 NME3Q13232 169 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 AUHQ13825 339 aaKnown RBP7.77□□□□□ -1.17
LINC00640-201ENST00000554409 PUM1Q14671 1186 aaKnown RBP eCLIP7.77□□□□□ -1.17
LINC00640-201ENST00000554409 ARID5BQ14865 1188 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 RSPO4Q2I0M5 234 aaPredicted RBP7.77□□□□□ -1.17
LINC00640-201ENST00000554409 CLEC16AQ2KHT3 1053 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 FILIP1LQ4L180 1135 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 FNDC3BQ53EP0 1204 aaKnown RBP7.77□□□□□ -1.17
LINC00640-201ENST00000554409 C2CD6Q53TS8 623 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 PITRM1Q5JRX3 1037 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 RABGAP1LQ5R372 815 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 TRNP1Q6NT89 227 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 MMS22LQ6ZRQ5 1243 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 SND1Q7KZF4 910 aaKnown RBP eCLIP7.77□□□□□ -1.17
LINC00640-201ENST00000554409 ERMP1Q7Z2K6 904 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 CYP2U1Q7Z449 544 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 PHF13Q86YI8 300 aaPredicted RBP7.77□□□□□ -1.17
LINC00640-201ENST00000554409 TMPRSS6Q8IU80 811 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 ABCA7Q8IZY2 2146 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 CCAR2Q8N163 923 aaKnown RBP7.77□□□□□ -1.17
LINC00640-201ENST00000554409 CFAP52Q8N1V2 620 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 FRMD1Q8N878 549 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 C12orf50Q8NA57 414 aaPredicted RBP7.77□□□□□ -1.17
LINC00640-201ENST00000554409 CYB5D2Q8WUJ1 264 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 PRCCQ92733 491 aaPredicted RBP7.77□□□□□ -1.17
LINC00640-201ENST00000554409 MYO19Q96H55 970 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 MRGPRX3Q96LB0 322 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 PCDHB18PQ96TA0 734 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 TBCBQ99426 244 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 RTKNQ9BST9 563 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 MKRN2Q9H000 416 aaKnown RBP7.77□□□□□ -1.17
LINC00640-201ENST00000554409 SLC6A17Q9H1V8 727 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 WDCPQ9H6R7 721 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 PRDM16Q9HAZ2 1276 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 ITM2CQ9NQX7 267 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 COX16Q9P0S2 106 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 KIAA1522Q9P206 1035 aaPredicted RBP7.77□□□□□ -1.17
LINC00640-201ENST00000554409 STIM2Q9P246 746 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 EVLQ9UI08 416 aaPredicted RBP7.77□□□□□ -1.17
LINC00640-201ENST00000554409 CDV3Q9UKY7 258 aaKnown RBP7.77□□□□□ -1.17
LINC00640-201ENST00000554409 INTS6Q9UL03 887 aaKnown RBP7.77□□□□□ -1.17
LINC00640-201ENST00000554409 CYP8B1Q9UNU6 501 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 HS3ST4Q9Y661 456 aa7.77□□□□□ -1.17
LINC00640-201ENST00000554409 IGLV3-10A0A075B6K4 115 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 GOLGA8SH3BPF8 625 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 I6L893 689 aaPredicted RBP7.76□□□□□ -1.17
LINC00640-201ENST00000554409 SLC30A4O14863 429 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 PAGE1O75459 146 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 CLDN11O75508 207 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 ADCY5O95622 1261 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 CALB1P05937 261 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 SRPRAP08240 638 aaKnown RBP7.76□□□□□ -1.17
LINC00640-201ENST00000554409 HLA-EP13747 358 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 RDXP35241 583 aaKnown RBP7.76□□□□□ -1.17
LINC00640-201ENST00000554409 CSKP41240 450 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 PTGER3P43115 390 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 PTPN9P43378 593 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 NSFP46459 744 aaKnown RBP7.76□□□□□ -1.17
LINC00640-201ENST00000554409 DHPSP49366 369 aaPredicted RBP7.76□□□□□ -1.17
LINC00640-201ENST00000554409 TPMTP51580 245 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 RNASE9P60153 205 aaKnown RBP7.76□□□□□ -1.17
LINC00640-201ENST00000554409 ST8SIA6P61647 398 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 RPL6Q02878 288 aaKnown RBP7.76□□□□□ -1.17
LINC00640-201ENST00000554409 ZBTB16Q05516 673 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 DEUP1Q05D60 604 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 PTP4A2Q12974 167 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 SF3A2Q15428 464 aaKnown RBP7.76□□□□□ -1.17
LINC00640-201ENST00000554409 CCDC6Q16204 474 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 PLEKHG6Q3KR16 790 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 AASDHQ4L235 1098 aaPredicted RBP7.76□□□□□ -1.17
LINC00640-201ENST00000554409 FSCBQ5H9T9 825 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 LYSMD4Q5XG99 296 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms