RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 KCNU1A8MYU2 1149 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 C1QTNF9BB2RNN3 333 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 F5H5T6 163 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 FLRT2O43155 660 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 DFNA5O60443 496 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 RNASEH1O60930 286 aaKnown RBP6.83□□□□□ -1.32
SLIRP-203ENST00000554074 C1QTNF9P0C862 333 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 SLC9A1P19634 815 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 TACR2P21452 398 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 PON1P27169 355 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 ERCC5P28715 1186 aaPredicted RBP6.83□□□□□ -1.32
SLIRP-203ENST00000554074 CCR1P32246 355 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 SCNN1AP37088 669 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 FAM193AP78312 1265 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 CDK17Q00537 523 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 ECT2LQ008S8 904 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 BNC1Q01954 994 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 PTK2Q05397 1052 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 SULT2A1Q06520 285 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 TEAD4Q15561 434 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 MAN2A1Q16706 1144 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 HLA-BQ31612 363 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 ZC3H12AQ5D1E8 599 aaKnown RBP6.83□□□□□ -1.32
SLIRP-203ENST00000554074 FSCBQ5H9T9 825 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 RABGAP1LQ5R372 815 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 C9orf64Q5T6V5 341 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 KIAA0895LQ68EN5 471 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 OLFML1Q6UWY5 402 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 SLC26A9Q7LBE3 791 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 FAM124AQ86V42 546 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 CHSY1Q86X52 802 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 CACUL1Q86Y37 369 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 ZDHHC17Q8IUH5 632 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 FAM114A1Q8IWE2 563 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 LGI2Q8N0V4 545 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 CARNMT1Q8N4J0 409 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 WDTC1Q8N5D0 677 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 ZNF366Q8N895 744 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 C1orf131Q8NDD1 294 aaKnown RBP6.83□□□□□ -1.32
SLIRP-203ENST00000554074 ZNF397Q8NF99 534 aaPredicted RBP6.83□□□□□ -1.32
SLIRP-203ENST00000554074 OR2I1PQ8NGU4 316 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 BAHD1Q8TBE0 780 aaPredicted RBP6.83□□□□□ -1.32
SLIRP-203ENST00000554074 ADAM32Q8TC27 787 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 ADAMTS14Q8WXS8 1223 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 IGSF8Q969P0 613 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 BIRC7Q96CA5 298 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 MYEOVQ96EZ4 313 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 PPP1R13BQ96KQ4 1090 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 NOX5Q96PH1 765 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 CPXM1Q96SM3 734 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 PRMT1Q99873 361 aaKnown RBP6.83□□□□□ -1.32
SLIRP-203ENST00000554074 CRACR2AQ9BSW2 395 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 MIR1-1HGQ9H1L0 117 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 PABPC3Q9H361 631 aaKnown RBP6.83□□□□□ -1.32
SLIRP-203ENST00000554074 CLSTN2Q9H4D0 955 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 C6orf106Q9H6K1 298 aaPredicted RBP6.83□□□□□ -1.32
SLIRP-203ENST00000554074 GAREM1Q9H706 876 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 TM7SF3Q9NS93 570 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 RRN3Q9NYV6 651 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 STIM2Q9P246 746 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 ADAMTS1Q9UHI8 967 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 XPO7Q9UIA9 1087 aaKnown RBP6.83□□□□□ -1.32
SLIRP-203ENST00000554074 PCOLCE2Q9UKZ9 415 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 ERVW-1Q9UQF0 538 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 NCKAP1Q9Y2A7 1128 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 PCDHB9Q9Y5E1 797 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 ADAMTS20P59510 1910 aa6.83□□□□□ -1.32
SLIRP-203ENST00000554074 APC2O95996 2303 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 A0A1B0GVM2 712 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 A0A1B0GVT2 93 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 A0A1W2PPC4 97 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 TCAF2A6NFQ2 919 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 LRRC72A6NJI9 287 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 VILLO15195 856 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 HYAL3O43820 417 aaPredicted RBP6.82□□□□□ -1.32
SLIRP-203ENST00000554074 SH3BP5O60239 455 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 PCDHGA12O60330 932 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 SIN3BO75182 1162 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 DAB1O75553 588 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 DKK1O94907 266 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 TOP3BO95985 862 aaKnown RBP6.82□□□□□ -1.32
SLIRP-203ENST00000554074 MOCS2O96007 188 aaPredicted RBP6.82□□□□□ -1.32
SLIRP-203ENST00000554074 ADH1BP00325 375 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 IGHV4-34P06331 123 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 SPINK2P20155 84 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 ABCB4P21439 1286 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 C5AR1P21730 350 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 CDH5P33151 784 aaPredicted RBP6.82□□□□□ -1.32
SLIRP-203ENST00000554074 NOS2P35228 1153 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 NNMTP40261 264 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 USP8P40818 1118 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 MTIF2P46199 727 aaKnown RBP6.82□□□□□ -1.32
SLIRP-203ENST00000554074 CSNK1EP49674 416 aaKnown RBP6.82□□□□□ -1.32
SLIRP-203ENST00000554074 CCR5P51681 352 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 BPIFB4P59827 614 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 RACK1P63244 317 aaKnown RBP6.82□□□□□ -1.32
SLIRP-203ENST00000554074 ELAVL3Q14576 367 aaKnown RBP6.82□□□□□ -1.32
SLIRP-203ENST00000554074 SUZ12Q15022 739 aaKnown RBP6.82□□□□□ -1.32
SLIRP-203ENST00000554074 CST6Q15828 149 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 CAMK4Q16566 473 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms