RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 CNGA2Q16280 664 aa10.25□□□□□ -0.77
ACTN1-210ENST00000553779 HNRNPA1L2Q32P51 320 aaKnown RBP10.25□□□□□ -0.77
ACTN1-210ENST00000553779 HS1BP3Q53T59 392 aa10.25□□□□□ -0.77
ACTN1-210ENST00000553779 FAM133BQ5BKY9 247 aaKnown RBP10.25□□□□□ -0.77
ACTN1-210ENST00000553779 PITRM1Q5JRX3 1037 aa10.25□□□□□ -0.77
ACTN1-210ENST00000553779 RABGAP1LQ5R372 815 aa10.25□□□□□ -0.77
ACTN1-210ENST00000553779 RAP1GAP2Q684P5 730 aa10.25□□□□□ -0.77
ACTN1-210ENST00000553779 DHRS13Q6UX07 377 aa10.25□□□□□ -0.77
ACTN1-210ENST00000553779 SND1Q7KZF4 910 aaKnown RBP eCLIP10.25□□□□□ -0.77
ACTN1-210ENST00000553779 TMPRSS7Q7RTY8 843 aa10.25□□□□□ -0.77
ACTN1-210ENST00000553779 DSG4Q86SJ6 1040 aa10.25□□□□□ -0.77
ACTN1-210ENST00000553779 TAC4Q86UU9 113 aa10.25□□□□□ -0.77
ACTN1-210ENST00000553779 ZC3H3Q8IXZ2 948 aaKnown RBP10.25□□□□□ -0.77
ACTN1-210ENST00000553779 ATP6V0D2Q8N8Y2 350 aa10.25□□□□□ -0.77
ACTN1-210ENST00000553779 OR2T34Q8NGX1 318 aa10.25□□□□□ -0.77
ACTN1-210ENST00000553779 OR14C36Q8NHC7 312 aa10.25□□□□□ -0.77
ACTN1-210ENST00000553779 FIBINQ8TAL6 211 aa10.25□□□□□ -0.77
ACTN1-210ENST00000553779 DHTKD1Q96HY7 919 aaPredicted RBP10.25□□□□□ -0.77
ACTN1-210ENST00000553779 LRIG1Q96JA1 1093 aa10.25□□□□□ -0.77
ACTN1-210ENST00000553779 SERAC1Q96JX3 654 aa10.25□□□□□ -0.77
ACTN1-210ENST00000553779 PRICKLE1Q96MT3 831 aaPredicted RBP10.25□□□□□ -0.77
ACTN1-210ENST00000553779 NUCKS1Q9H1E3 243 aaKnown RBP10.25□□□□□ -0.77
ACTN1-210ENST00000553779 OSGEPQ9NPF4 335 aa10.25□□□□□ -0.77
ACTN1-210ENST00000553779 GDF3Q9NR23 364 aa10.25□□□□□ -0.77
ACTN1-210ENST00000553779 SLC25A13Q9UJS0 675 aa10.25□□□□□ -0.77
ACTN1-210ENST00000553779 ERVW-1Q9UQF0 538 aa10.25□□□□□ -0.77
ACTN1-210ENST00000553779 GPSM3Q9Y4H4 160 aa10.25□□□□□ -0.77
ACTN1-210ENST00000553779 SLCO1B1Q9Y6L6 691 aa10.25□□□□□ -0.77
ACTN1-210ENST00000553779 CELSR3Q9NYQ7 3312 aa10.25□□□□□ -0.77
ACTN1-210ENST00000553779 TBC1D3DA0A087WVF3 549 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 TBC1D3IA0A087WXS9 549 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 TBC1D3EA0A087X179 549 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 TBC1D3KA0A087X1G2 549 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 A0A1W2PPC4 97 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 TBC1D3FA6NER0 549 aaPredicted RBP10.24□□□□□ -0.77
ACTN1-210ENST00000553779 TTC34A8MYJ7 566 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 TBC1D3LB9A6J9 549 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 TAF4O00268 1085 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 VILLO15195 856 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 BNIP3LO60238 219 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 PCDHGA12O60330 932 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 LETM1O95202 739 aaPredicted RBP10.24□□□□□ -0.77
ACTN1-210ENST00000553779 LDOC1O95751 146 aaPredicted RBP10.24□□□□□ -0.77
ACTN1-210ENST00000553779 SRPRAP08240 638 aaKnown RBP10.24□□□□□ -0.77
ACTN1-210ENST00000553779 TBC1D3HP0C7X1 549 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 ZNF18P17022 549 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 TACR2P21452 398 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 CD38P28907 300 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 SLC8A1P32418 973 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 CTSOP43234 321 aaPredicted RBP10.24□□□□□ -0.77
ACTN1-210ENST00000553779 CTSKP43235 329 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 GALCP54803 685 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 CYP4F3Q08477 520 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 NNTQ13423 1086 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 ACCSLQ4AC99 568 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 COBLL1Q53SF7 1204 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 DCAF6Q58WW2 860 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 MS4A13Q5J8X5 152 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 C6orf118Q5T5N4 469 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 TBC1D3GQ6DHY5 549 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 NADSYN1Q6IA69 706 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 TBC1D3CQ6IPX1 549 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 MMS22LQ6ZRQ5 1243 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 GATAD2AQ86YP4 633 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 SCUBE3Q8IX30 993 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 TBC1D3Q8IZP1 549 aaPredicted RBP10.24□□□□□ -0.77
ACTN1-210ENST00000553779 FMR1NBQ8N0W7 255 aaPredicted RBP10.24□□□□□ -0.77
ACTN1-210ENST00000553779 STK40Q8N2I9 435 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 UBR7Q8N806 425 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 C1orf216Q8TAB5 229 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 BAHD1Q8TBE0 780 aaPredicted RBP10.24□□□□□ -0.77
ACTN1-210ENST00000553779 SLC35F5Q8WV83 523 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 NELFBQ8WX92 580 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 KAT5Q92993 513 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 AZIN2Q96A70 460 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 TTC17Q96AE7 1141 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 NXPE2Q96DL1 559 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 CNDP2Q96KP4 475 aaKnown RBP10.24□□□□□ -0.77
ACTN1-210ENST00000553779 BTN2A3PQ96KV6 586 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 RPL10LQ96L21 214 aaKnown RBP10.24□□□□□ -0.77
ACTN1-210ENST00000553779 FCRL2Q96LA5 508 aaPredicted RBP10.24□□□□□ -0.77
ACTN1-210ENST00000553779 ELF4Q99607 663 aaPredicted RBP10.24□□□□□ -0.77
ACTN1-210ENST00000553779 INTS2Q9H0H0 1204 aaKnown RBP10.24□□□□□ -0.77
ACTN1-210ENST00000553779 SYNCQ9H7C4 482 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 FZD4Q9ULV1 537 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 NAALADL1Q9UQQ1 740 aa10.24□□□□□ -0.77
ACTN1-210ENST00000553779 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.24□□□□□ -0.77
ACTN1-210ENST00000553779 TARSL2A2RTX5 802 aaKnown RBP10.23□□□□□ -0.77
ACTN1-210ENST00000553779 TRABD2BA6NFA1 517 aa10.23□□□□□ -0.77
ACTN1-210ENST00000553779 C1QTNF3-AMACRE9PGA6 284 aa10.23□□□□□ -0.77
ACTN1-210ENST00000553779 BIN1O00499 593 aa10.23□□□□□ -0.77
ACTN1-210ENST00000553779 ENC1O14682 589 aa10.23□□□□□ -0.77
ACTN1-210ENST00000553779 P4HA2O15460 535 aa10.23□□□□□ -0.77
ACTN1-210ENST00000553779 RFPL3O75679 317 aa10.23□□□□□ -0.77
ACTN1-210ENST00000553779 FGFR1OPO95684 399 aaKnown RBP10.23□□□□□ -0.77
ACTN1-210ENST00000553779 GNA14O95837 355 aa10.23□□□□□ -0.77
ACTN1-210ENST00000553779 AFPP02771 609 aaKnown RBP10.23□□□□□ -0.77
ACTN1-210ENST00000553779 IGHV4-34P06331 123 aa10.23□□□□□ -0.77
ACTN1-210ENST00000553779 SLC2A3P11169 496 aa10.23□□□□□ -0.77
ACTN1-210ENST00000553779 JUPP14923 745 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms