RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 DEFB124Q8NES8 71 aa16.62■□□□□ 0.25
ACTN1-209ENST00000553659 ZSWIM1Q9BR11 485 aa16.62■□□□□ 0.25
ACTN1-209ENST00000553659 DNAI2Q9GZS0 605 aa16.62■□□□□ 0.25
ACTN1-209ENST00000553659 VIPAS39Q9H9C1 493 aa16.62■□□□□ 0.25
ACTN1-209ENST00000553659 PILRBQ9UKJ0 227 aa16.62■□□□□ 0.25
ACTN1-209ENST00000553659 SPOPO43791 374 aa16.61■□□□□ 0.25
ACTN1-209ENST00000553659 ENGP17813 658 aa16.61■□□□□ 0.25
ACTN1-209ENST00000553659 SPINK2P20155 84 aa16.61■□□□□ 0.25
ACTN1-209ENST00000553659 CDH5P33151 784 aaPredicted RBP16.61■□□□□ 0.25
ACTN1-209ENST00000553659 MAN1A1P33908 653 aa16.61■□□□□ 0.25
ACTN1-209ENST00000553659 CTNNA1P35221 906 aaKnown RBP16.61■□□□□ 0.25
ACTN1-209ENST00000553659 HOXD12P35452 270 aa16.61■□□□□ 0.25
ACTN1-209ENST00000553659 ASPAP45381 313 aa16.61■□□□□ 0.25
ACTN1-209ENST00000553659 ANO4Q32M45 955 aa16.61■□□□□ 0.25
ACTN1-209ENST00000553659 PEAR1Q5VY43 1037 aaPredicted RBP16.61■□□□□ 0.25
ACTN1-209ENST00000553659 NAA35Q5VZE5 725 aa16.61■□□□□ 0.25
ACTN1-209ENST00000553659 CCNI2Q6ZMN8 369 aaPredicted RBP16.61■□□□□ 0.25
ACTN1-209ENST00000553659 MON1BQ7L1V2 547 aa16.61■□□□□ 0.25
ACTN1-209ENST00000553659 MAATS1Q7Z4T9 603 aa16.61■□□□□ 0.25
ACTN1-209ENST00000553659 FUKQ8N0W3 1084 aa16.61■□□□□ 0.25
ACTN1-209ENST00000553659 TERB1Q8NA31 727 aa16.61■□□□□ 0.25
ACTN1-209ENST00000553659 ZNF606Q8WXB4 792 aa16.61■□□□□ 0.25
ACTN1-209ENST00000553659 WBP2Q969T9 261 aa16.61■□□□□ 0.25
ACTN1-209ENST00000553659 MS4A14Q96JA4 679 aa16.61■□□□□ 0.25
ACTN1-209ENST00000553659 LRRC1Q9BTT6 524 aa16.61■□□□□ 0.25
ACTN1-209ENST00000553659 TMEM121BQ9BXQ6 578 aaPredicted RBP16.61■□□□□ 0.25
ACTN1-209ENST00000553659 ADAM33Q9BZ11 813 aa16.61■□□□□ 0.25
ACTN1-209ENST00000553659 NACA2Q9H009 215 aa16.61■□□□□ 0.25
ACTN1-209ENST00000553659 SLC32A1Q9H598 525 aa16.61■□□□□ 0.25
ACTN1-209ENST00000553659 ACP6Q9NPH0 428 aa16.61■□□□□ 0.25
ACTN1-209ENST00000553659 ADAM22Q9P0K1 906 aa16.61■□□□□ 0.25
ACTN1-209ENST00000553659 GMIPQ9P107 970 aa16.61■□□□□ 0.25
ACTN1-209ENST00000553659 ZMIZ1Q9ULJ6 1067 aa16.61■□□□□ 0.25
ACTN1-209ENST00000553659 STRIP2Q9ULQ0 834 aa16.61■□□□□ 0.25
ACTN1-209ENST00000553659 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.61■□□□□ 0.25
ACTN1-209ENST00000553659 STARD13Q9Y3M8 1113 aa16.61■□□□□ 0.25
ACTN1-209ENST00000553659 MYO1FO00160 1098 aa16.6■□□□□ 0.25
ACTN1-209ENST00000553659 KRIT1O00522 736 aa16.6■□□□□ 0.25
ACTN1-209ENST00000553659 MAP2K7O14733 419 aa16.6■□□□□ 0.25
ACTN1-209ENST00000553659 AP1G2O75843 785 aa16.6■□□□□ 0.25
ACTN1-209ENST00000553659 TOP3BO95985 862 aaKnown RBP16.6■□□□□ 0.25
ACTN1-209ENST00000553659 GABRG2P18507 467 aa16.6■□□□□ 0.25
ACTN1-209ENST00000553659 COMTP21964 271 aa16.6■□□□□ 0.25
ACTN1-209ENST00000553659 ITPKAP23677 461 aa16.6■□□□□ 0.25
ACTN1-209ENST00000553659 NTSR1P30989 418 aa16.6■□□□□ 0.25
ACTN1-209ENST00000553659 MAPK8P45983 427 aa16.6■□□□□ 0.25
ACTN1-209ENST00000553659 NNTQ13423 1086 aa16.6■□□□□ 0.25
ACTN1-209ENST00000553659 MESDQ14696 234 aa16.6■□□□□ 0.25
ACTN1-209ENST00000553659 DUOXA1Q1HG43 343 aa16.6■□□□□ 0.25
ACTN1-209ENST00000553659 EMBQ6PCB8 327 aa16.6■□□□□ 0.25
ACTN1-209ENST00000553659 SLC36A4Q6YBV0 504 aa16.6■□□□□ 0.25
ACTN1-209ENST00000553659 HTR3DQ70Z44 454 aa16.6■□□□□ 0.25
ACTN1-209ENST00000553659 ACOT1Q86TX2 421 aa16.6■□□□□ 0.25
ACTN1-209ENST00000553659 ZMIZ2Q8NF64 920 aa16.6■□□□□ 0.25
ACTN1-209ENST00000553659 CEP76Q8TAP6 659 aa16.6■□□□□ 0.25
ACTN1-209ENST00000553659 MAIP1Q8WWC4 291 aa16.6■□□□□ 0.25
ACTN1-209ENST00000553659 CYFIP2Q96F07 1278 aa16.6■□□□□ 0.25
ACTN1-209ENST00000553659 SMOQ99835 787 aa16.6■□□□□ 0.25
ACTN1-209ENST00000553659 SCNM1Q9BWG6 230 aa16.6■□□□□ 0.25
ACTN1-209ENST00000553659 FUT8Q9BYC5 575 aa16.6■□□□□ 0.25
ACTN1-209ENST00000553659 SDCBP2Q9H190 292 aa16.6■□□□□ 0.25
ACTN1-209ENST00000553659 LHX5Q9H2C1 402 aa16.6■□□□□ 0.25
ACTN1-209ENST00000553659 FBXO44Q9H4M3 255 aa16.6■□□□□ 0.25
ACTN1-209ENST00000553659 CSNK1G1Q9HCP0 422 aa16.6■□□□□ 0.25
ACTN1-209ENST00000553659 KRT82Q9NSB4 513 aa16.6■□□□□ 0.25
ACTN1-209ENST00000553659 PARVAQ9NVD7 372 aa16.6■□□□□ 0.25
ACTN1-209ENST00000553659 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.6■□□□□ 0.25
ACTN1-209ENST00000553659 HCN2Q9UL51 889 aa16.6■□□□□ 0.25
ACTN1-209ENST00000553659 KIAA1257Q9ULG3 409 aa16.6■□□□□ 0.25
ACTN1-209ENST00000553659 PCDHA3Q9Y5H8 950 aa16.6■□□□□ 0.25
ACTN1-209ENST00000553659 CFAP47Q6ZTR5 3102 aa16.6■□□□□ 0.25
ACTN1-209ENST00000553659 PCDH15Q96QU1 1955 aa16.59■□□□□ 0.25
ACTN1-209ENST00000553659 TMEM8BA6NDV4 472 aa16.59■□□□□ 0.25
ACTN1-209ENST00000553659 UPK3BL1B0FP48 263 aa16.59■□□□□ 0.25
ACTN1-209ENST00000553659 UPK3BL2E5RIL1 263 aa16.59■□□□□ 0.25
ACTN1-209ENST00000553659 TLR5O60602 858 aa16.59■□□□□ 0.25
ACTN1-209ENST00000553659 BEST1O76090 585 aa16.59■□□□□ 0.25
ACTN1-209ENST00000553659 SEC31AO94979 1220 aaKnown RBP16.59■□□□□ 0.25
ACTN1-209ENST00000553659 IRF1P10914 325 aa16.59■□□□□ 0.25
ACTN1-209ENST00000553659 HOXB2P14652 356 aa16.59■□□□□ 0.25
ACTN1-209ENST00000553659 PGFP49763 221 aa16.59■□□□□ 0.25
ACTN1-209ENST00000553659 RWDD2BP57060 319 aa16.59■□□□□ 0.25
ACTN1-209ENST00000553659 RPL6Q02878 288 aaKnown RBP16.59■□□□□ 0.25
ACTN1-209ENST00000553659 PTP4A2Q12974 167 aa16.59■□□□□ 0.25
ACTN1-209ENST00000553659 SEMA3BQ13214 749 aa16.59■□□□□ 0.25
ACTN1-209ENST00000553659 STILQ15468 1287 aa16.59■□□□□ 0.25
ACTN1-209ENST00000553659 PLEKHA7Q6IQ23 1121 aa16.59■□□□□ 0.25
ACTN1-209ENST00000553659 CRYBG2Q8N1P7 616 aa16.59■□□□□ 0.25
ACTN1-209ENST00000553659 KLF16Q9BXK1 252 aaPredicted RBP16.59■□□□□ 0.25
ACTN1-209ENST00000553659 MIS12Q9H081 205 aa16.59■□□□□ 0.25
ACTN1-209ENST00000553659 GOLPH3Q9H4A6 298 aa16.59■□□□□ 0.25
ACTN1-209ENST00000553659 TLR8Q9NR97 1041 aaKnown RBP16.59■□□□□ 0.25
ACTN1-209ENST00000553659 ANAPC7Q9UJX3 599 aa16.59■□□□□ 0.25
ACTN1-209ENST00000553659 SLC6A14Q9UN76 642 aa16.59■□□□□ 0.25
ACTN1-209ENST00000553659 A0A1W2PQF6 199 aa16.58■□□□□ 0.24
ACTN1-209ENST00000553659 TRIM24O15164 1050 aa16.58■□□□□ 0.24
ACTN1-209ENST00000553659 ZBTB24O43167 697 aaPredicted RBP16.58■□□□□ 0.24
ACTN1-209ENST00000553659 GREM1O60565 184 aa16.58■□□□□ 0.24
ACTN1-209ENST00000553659 CFIP05156 583 aa16.58■□□□□ 0.24
ACTN1-209ENST00000553659 SERPINF2P08697 491 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms