RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 TCAF2A6NFQ2 919 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 C2CD4DB7Z1M9 353 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 H7C0C1 242 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 MCF2LO15068 1137 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 DCLK1O15075 740 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 CTAGE8P0CG41 777 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 ARSAP15289 507 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 TCF3P15923 654 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 GDI1P31150 447 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 SERPINB6P35237 376 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 ATP5OP48047 213 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 CDH4P55283 916 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 EIF3EP60228 445 aaKnown RBP10.04□□□□□ -0.8
CHD8-204ENST00000553622 OTUD4Q01804 1114 aaKnown RBP10.04□□□□□ -0.8
CHD8-204ENST00000553622 GBE1Q04446 702 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 CDH18Q13634 790 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 LEXMQ3ZCV2 418 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 MPPE1Q53F39 396 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 LY6G5CQ5SRR4 150 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 TTC39BQ5VTQ0 682 aaPredicted RBP10.04□□□□□ -0.8
CHD8-204ENST00000553622 SLC9A4Q6AI14 798 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 B4GALNT4Q76KP1 1039 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 CTAGE6Q86UF2 777 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 ZC3H18Q86VM9 953 aaKnown RBP10.04□□□□□ -0.8
CHD8-204ENST00000553622 TMEM25Q86YD3 366 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 CTAGE4Q8IX94 777 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 FAM217AQ8IXS0 508 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 CPXM2Q8N436 756 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 NPWQ8N729 165 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 PLD5Q8N7P1 536 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 CEP112Q8N8E3 955 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 TTC13Q8NBP0 860 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 TTC8Q8TAM2 541 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 ACTL9Q8TC94 416 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 LRRN4Q8WUT4 740 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 OSCP1Q8WVF1 389 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 FGF14Q92915 247 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 MAGOHBQ96A72 148 aaKnown RBP10.04□□□□□ -0.8
CHD8-204ENST00000553622 ELSPBP1Q96BH3 223 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 OTUB2Q96DC9 234 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 CCDC114Q96M63 670 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 PHF7Q9BWX1 381 aaPredicted RBP10.04□□□□□ -0.8
CHD8-204ENST00000553622 EBF3Q9H4W6 596 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 TRPV4Q9HBA0 871 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 SPHK2Q9NRA0 654 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 OBP2AQ9NY56 170 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 DONSONQ9NYP3 566 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 EPS15L1Q9UBC2 864 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 STOML2Q9UJZ1 356 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 TTC7AQ9ULT0 858 aaPredicted RBP10.04□□□□□ -0.8
CHD8-204ENST00000553622 NEU3Q9UQ49 428 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 FAM50BQ9Y247 325 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 EFR3BQ9Y2G0 817 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 NUMBLQ9Y6R0 609 aa10.04□□□□□ -0.8
CHD8-204ENST00000553622 DRGXA6NNA5 263 aa10.03□□□□□ -0.8
CHD8-204ENST00000553622 APOC4-APOC2K7ER74 178 aa10.03□□□□□ -0.8
CHD8-204ENST00000553622 CLDN11O75508 207 aa10.03□□□□□ -0.8
CHD8-204ENST00000553622 LUC7L3O95232 432 aaKnown RBP10.03□□□□□ -0.8
CHD8-204ENST00000553622 NFATC1O95644 943 aa10.03□□□□□ -0.8
CHD8-204ENST00000553622 ADH1CP00326 375 aa10.03□□□□□ -0.8
CHD8-204ENST00000553622 APOC2P02655 101 aa10.03□□□□□ -0.8
CHD8-204ENST00000553622 RHOCP08134 193 aa10.03□□□□□ -0.8
CHD8-204ENST00000553622 ADH5P11766 374 aa10.03□□□□□ -0.8
CHD8-204ENST00000553622 PSMC3P17980 439 aa10.03□□□□□ -0.8
CHD8-204ENST00000553622 HOXC13P31276 330 aa10.03□□□□□ -0.8
CHD8-204ENST00000553622 TNK2Q07912 1038 aa10.03□□□□□ -0.8
CHD8-204ENST00000553622 KLF1Q13351 362 aaPredicted RBP10.03□□□□□ -0.8
CHD8-204ENST00000553622 HTR4Q13639 388 aa10.03□□□□□ -0.8
CHD8-204ENST00000553622 PAFAH1B3Q15102 231 aaKnown RBP10.03□□□□□ -0.8
CHD8-204ENST00000553622 PDGFRLQ15198 375 aa10.03□□□□□ -0.8
CHD8-204ENST00000553622 EML3Q32P44 896 aa10.03□□□□□ -0.8
CHD8-204ENST00000553622 DARS2Q6PI48 645 aaKnown RBP10.03□□□□□ -0.8
CHD8-204ENST00000553622 CHST9Q7L1S5 443 aa10.03□□□□□ -0.8
CHD8-204ENST00000553622 NLRP14Q86W24 1093 aa10.03□□□□□ -0.8
CHD8-204ENST00000553622 MFN1Q8IWA4 741 aa10.03□□□□□ -0.8
CHD8-204ENST00000553622 MFSD6LQ8IWD5 586 aa10.03□□□□□ -0.8
CHD8-204ENST00000553622 NAT16Q8N8M0 369 aa10.03□□□□□ -0.8
CHD8-204ENST00000553622 CCNYQ8ND76 341 aa10.03□□□□□ -0.8
CHD8-204ENST00000553622 RSAD2Q8WXG1 361 aa10.03□□□□□ -0.8
CHD8-204ENST00000553622 IRF7Q92985 503 aa10.03□□□□□ -0.8
CHD8-204ENST00000553622 ATP2A3Q93084 1043 aa10.03□□□□□ -0.8
CHD8-204ENST00000553622 ASIC4Q96FT7 647 aa10.03□□□□□ -0.8
CHD8-204ENST00000553622 KRT12Q99456 494 aa10.03□□□□□ -0.8
CHD8-204ENST00000553622 SPON2Q9BUD6 331 aa10.03□□□□□ -0.8
CHD8-204ENST00000553622 RPP25Q9BUL9 199 aaKnown RBP10.03□□□□□ -0.8
CHD8-204ENST00000553622 TRMT61BQ9BVS5 477 aaKnown RBP10.03□□□□□ -0.8
CHD8-204ENST00000553622 MUC3BQ9H195 1237 aa10.03□□□□□ -0.8
CHD8-204ENST00000553622 BRD9Q9H8M2 597 aa10.03□□□□□ -0.8
CHD8-204ENST00000553622 PRDM16Q9HAZ2 1276 aa10.03□□□□□ -0.8
CHD8-204ENST00000553622 RBM12Q9NTZ6 932 aaKnown RBP10.03□□□□□ -0.8
CHD8-204ENST00000553622 NDFIP2Q9NV92 336 aa10.03□□□□□ -0.8
CHD8-204ENST00000553622 TMEM248Q9NWD8 314 aa10.03□□□□□ -0.8
CHD8-204ENST00000553622 LIMD1Q9UGP4 676 aa10.03□□□□□ -0.8
CHD8-204ENST00000553622 SZT2Q5T011 3432 aa10.02□□□□□ -0.81
CHD8-204ENST00000553622 ARHGAP42A6NI28 874 aa10.02□□□□□ -0.81
CHD8-204ENST00000553622 RASA4BC9J798 803 aa10.02□□□□□ -0.81
CHD8-204ENST00000553622 CCDC188H7C350 402 aa10.02□□□□□ -0.81
CHD8-204ENST00000553622 PPP1R12AO14974 1030 aaPredicted RBP10.02□□□□□ -0.81
CHD8-204ENST00000553622 RASA4O43374 803 aa10.02□□□□□ -0.81
CHD8-204ENST00000553622 RAMP2O60895 175 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms