RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 CDH24Q86UP0 819 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 ITIH5Q86UX2 942 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 PIGZQ86VD9 579 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 LRRTM3Q86VH5 581 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 XYLT1Q86Y38 959 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 PALB2Q86YC2 1186 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 SCN4BQ8IWT1 228 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 ELMOD1Q8N336 334 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 C17orf53Q8N3J3 647 aaPredicted RBP5.23□□□□□ -1.57
VTI1B-202ENST00000553619 FAM13CQ8NE31 585 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 PIWIL2Q8TC59 973 aaKnown RBP5.23□□□□□ -1.57
VTI1B-202ENST00000553619 HDAC7Q8WUI4 952 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 MAIP1Q8WWC4 291 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 PPP2R3CQ969Q6 453 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 MYLPFQ96A32 169 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 CPXM1Q96SM3 734 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 CDK5RAP1Q96SZ6 601 aaKnown RBP5.23□□□□□ -1.57
VTI1B-202ENST00000553619 NAP1L3Q99457 506 aaPredicted RBP5.23□□□□□ -1.57
VTI1B-202ENST00000553619 PKMYT1Q99640 499 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 SMOQ99835 787 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 RTP3Q9BQQ7 232 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 LMAN2LQ9H0V9 348 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 POPDC2Q9HBU9 364 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 RXFP1Q9HBX9 757 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 ABCC13Q9NSE7 274 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 OLA1Q9NTK5 396 aaKnown RBP5.23□□□□□ -1.57
VTI1B-202ENST00000553619 DDX56Q9NY93 547 aaKnown RBP5.23□□□□□ -1.57
VTI1B-202ENST00000553619 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.23□□□□□ -1.57
VTI1B-202ENST00000553619 UXTQ9UBK9 157 aaPredicted RBP5.23□□□□□ -1.57
VTI1B-202ENST00000553619 ANAPC7Q9UJX3 599 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 STAP1Q9ULZ2 295 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 HYOU1Q9Y4L1 999 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 ASB3Q9Y575 518 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 NME7Q9Y5B8 376 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 IRAK3Q9Y616 596 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 SAR1BQ9Y6B6 198 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 CDY1Q9Y6F8 540 aa5.23□□□□□ -1.57
VTI1B-202ENST00000553619 MTMR11A4FU01 709 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 LINC01553A4QN01 128 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 TMEM110-MUSTN1A8MSY1 372 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 KRTAP9-7A8MTY7 169 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 E5RJQ4 531 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 F8VP50 259 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 F8W810 466 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 H3BNC9 293 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 HCRTO43612 131 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 BUB1BO60566 1050 aaPredicted RBP5.22□□□□□ -1.57
VTI1B-202ENST00000553619 PROSCO94903 275 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 LTFP02788 710 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 HAPLN1P10915 354 aaPredicted RBP5.22□□□□□ -1.57
VTI1B-202ENST00000553619 TFE3P19532 575 aaPredicted RBP5.22□□□□□ -1.57
VTI1B-202ENST00000553619 CYP2F1P24903 491 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 PSMA2P25787 234 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 CTNNA2P26232 953 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 YWHAQP27348 245 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 CFPP27918 469 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 SDC4P31431 198 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 GBP2P32456 591 aaPredicted RBP5.22□□□□□ -1.57
VTI1B-202ENST00000553619 PCK1P35558 622 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 PBX3P40426 434 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 MATKP42679 507 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 PTPN9P43378 593 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 RGS19P49795 217 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 ZNF143P52747 638 aaPredicted RBP5.22□□□□□ -1.57
VTI1B-202ENST00000553619 EPHB3P54753 998 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 RWDD2BP57060 319 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 DAOAP59103 153 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 ERVK-21P61565 698 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 ROR1Q01973 937 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 CKAP4Q07065 602 aaKnown RBP5.22□□□□□ -1.57
VTI1B-202ENST00000553619 ADCY1Q08828 1119 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 DUSP4Q13115 394 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 GPM6BQ13491 265 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 PPP2R5EQ16537 467 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 ARL13BQ3SXY8 428 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 PABPC1LQ4VXU2 614 aaKnown RBP5.22□□□□□ -1.57
VTI1B-202ENST00000553619 BOLA3Q53S33 107 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 SNAP47Q5SQN1 464 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 ZFYVE27Q5T4F4 411 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 ACBD5Q5T8D3 534 aaPredicted RBP5.22□□□□□ -1.57
VTI1B-202ENST00000553619 CYP4A22Q5TCH4 519 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 SEL1L2Q5TEA6 688 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 CCDC181Q5TID7 509 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 LRRC38Q5VT99 294 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 PAPD7Q5XG87 772 aaKnown RBP5.22□□□□□ -1.57
VTI1B-202ENST00000553619 BTBD8Q5XKL5 378 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 PM20D1Q6GTS8 502 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 CC2D1AQ6P1N0 951 aaPredicted RBP5.22□□□□□ -1.57
VTI1B-202ENST00000553619 PRSS55Q6UWB4 352 aaPredicted RBP5.22□□□□□ -1.57
VTI1B-202ENST00000553619 LCNL1Q6ZST4 164 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 DENND5BQ6ZUT9 1274 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 FAM183BPQ6ZVS7 135 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 TMPRSS7Q7RTY8 843 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 TMCO2Q7Z6W1 182 aaPredicted RBP5.22□□□□□ -1.57
VTI1B-202ENST00000553619 TADA2BQ86TJ2 420 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 MON1AQ86VX9 555 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 MAP7D3Q8IWC1 876 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 RHOT1Q8IXI2 618 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 TCEAL8Q8IYN2 117 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 RCOR2Q8IZ40 523 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms