RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 KMT5BQ4FZB7 885 aa14.34□□□□□ -0.11
PRPF39-204ENST00000553605 KDM1BQ8NB78 822 aa14.34□□□□□ -0.11
PRPF39-204ENST00000553605 ZNF507Q8TCN5 953 aa14.34□□□□□ -0.11
PRPF39-204ENST00000553605 TWNKQ96RR1 684 aa14.34□□□□□ -0.11
PRPF39-204ENST00000553605 KDM4CQ9H3R0 1056 aa14.34□□□□□ -0.11
PRPF39-204ENST00000553605 NLGN3Q9NZ94 848 aa14.34□□□□□ -0.11
PRPF39-204ENST00000553605 MAN2B2Q9Y2E5 1009 aa14.34□□□□□ -0.11
PRPF39-204ENST00000553605 PAXBP1Q9Y5B6 917 aa14.34□□□□□ -0.11
PRPF39-204ENST00000553605 U3KQA8 63 aa14.34□□□□□ -0.11
PRPF39-204ENST00000553605 EDDM13A0A1B0GTR0 161 aa14.33□□□□□ -0.12
PRPF39-204ENST00000553605 PMS2P1A4D2B8 440 aa14.33□□□□□ -0.12
PRPF39-204ENST00000553605 NEMP2A6NFY4 417 aa14.33□□□□□ -0.12
PRPF39-204ENST00000553605 ENO4A6NNW6 628 aa14.33□□□□□ -0.12
PRPF39-204ENST00000553605 EIF3DO15371 548 aaKnown RBP eCLIP14.33□□□□□ -0.12
PRPF39-204ENST00000553605 TBL1XO60907 577 aa14.33□□□□□ -0.12
PRPF39-204ENST00000553605 PPFIA2O75334 1257 aa14.33□□□□□ -0.12
PRPF39-204ENST00000553605 PIAS2O75928 621 aa14.33□□□□□ -0.12
PRPF39-204ENST00000553605 IL1BP01584 269 aa14.33□□□□□ -0.12
PRPF39-204ENST00000553605 TXLNAP40222 546 aa14.33□□□□□ -0.12
PRPF39-204ENST00000553605 CSKP41240 450 aa14.33□□□□□ -0.12
PRPF39-204ENST00000553605 POM121L1PQ3SYA9 428 aa14.33□□□□□ -0.12
PRPF39-204ENST00000553605 MPP7Q5T2T1 576 aa14.33□□□□□ -0.12
PRPF39-204ENST00000553605 CCDC73Q6ZRK6 1079 aa14.33□□□□□ -0.12
PRPF39-204ENST00000553605 STK40Q8N2I9 435 aa14.33□□□□□ -0.12
PRPF39-204ENST00000553605 ZNF557Q8N988 423 aaPredicted RBP14.33□□□□□ -0.12
PRPF39-204ENST00000553605 WDR36Q8NI36 951 aaKnown RBP14.33□□□□□ -0.12
PRPF39-204ENST00000553605 PLEKHO2Q8TD55 490 aa14.33□□□□□ -0.12
PRPF39-204ENST00000553605 LMLNQ96KR4 655 aa14.33□□□□□ -0.12
PRPF39-204ENST00000553605 PSMG3-AS1Q96PY0 264 aa14.33□□□□□ -0.12
PRPF39-204ENST00000553605 DUSP23Q9BVJ7 150 aa14.33□□□□□ -0.12
PRPF39-204ENST00000553605 NT5C1AQ9BXI3 368 aa14.33□□□□□ -0.12
PRPF39-204ENST00000553605 PANK2Q9BZ23 570 aa14.33□□□□□ -0.12
PRPF39-204ENST00000553605 CA5BQ9Y2D0 317 aa14.33□□□□□ -0.12
PRPF39-204ENST00000553605 HBS1LQ9Y450 684 aaKnown RBP14.33□□□□□ -0.12
PRPF39-204ENST00000553605 LRRK2Q5S007 2527 aa14.33□□□□□ -0.12
PRPF39-204ENST00000553605 NOTCH2Q04721 2471 aa14.32□□□□□ -0.12
PRPF39-204ENST00000553605 CLEC18AA5D8T8 446 aa14.32□□□□□ -0.12
PRPF39-204ENST00000553605 LATS1O95835 1130 aa14.32□□□□□ -0.12
PRPF39-204ENST00000553605 DRD3P35462 400 aa14.32□□□□□ -0.12
PRPF39-204ENST00000553605 STAT6P42226 847 aa14.32□□□□□ -0.12
PRPF39-204ENST00000553605 ASPAP45381 313 aa14.32□□□□□ -0.12
PRPF39-204ENST00000553605 SNRPFP62306 86 aaKnown RBP14.32□□□□□ -0.12
PRPF39-204ENST00000553605 SETMARQ53H47 684 aaPredicted RBP14.32□□□□□ -0.12
PRPF39-204ENST00000553605 PIK3R6Q5UE93 754 aa14.32□□□□□ -0.12
PRPF39-204ENST00000553605 CLEC18BQ6UXF7 455 aa14.32□□□□□ -0.12
PRPF39-204ENST00000553605 RBM44Q6ZP01 1051 aaKnown RBP14.32□□□□□ -0.12
PRPF39-204ENST00000553605 EPM2AIP1Q7L775 607 aaPredicted RBP14.32□□□□□ -0.12
PRPF39-204ENST00000553605 MFN1Q8IWA4 741 aa14.32□□□□□ -0.12
PRPF39-204ENST00000553605 CLEC18CQ8NCF0 446 aa14.32□□□□□ -0.12
PRPF39-204ENST00000553605 FIBINQ8TAL6 211 aa14.32□□□□□ -0.12
PRPF39-204ENST00000553605 PARD3BQ8TEW8 1205 aa14.32□□□□□ -0.12
PRPF39-204ENST00000553605 ARRDC3Q96B67 414 aa14.32□□□□□ -0.12
PRPF39-204ENST00000553605 SLC25A18Q9H1K4 315 aa14.32□□□□□ -0.12
PRPF39-204ENST00000553605 CAAP1Q9H8G2 361 aa14.32□□□□□ -0.12
PRPF39-204ENST00000553605 OLA1Q9NTK5 396 aaKnown RBP14.32□□□□□ -0.12
PRPF39-204ENST00000553605 STIM2Q9P246 746 aa14.32□□□□□ -0.12
PRPF39-204ENST00000553605 SFMBT1Q9UHJ3 866 aa14.32□□□□□ -0.12
PRPF39-204ENST00000553605 INTS6Q9UL03 887 aaKnown RBP14.32□□□□□ -0.12
PRPF39-204ENST00000553605 ERVW-1Q9UQF0 538 aa14.32□□□□□ -0.12
PRPF39-204ENST00000553605 TEP1Q99973 2627 aaKnown RBP14.32□□□□□ -0.12
PRPF39-204ENST00000553605 UBE4BO95155 1302 aa14.32□□□□□ -0.12
PRPF39-204ENST00000553605 SPTAN1Q13813 2472 aaKnown RBP14.32□□□□□ -0.12
PRPF39-204ENST00000553605 TLN1Q9Y490 2541 aaKnown RBP14.31□□□□□ -0.12
PRPF39-204ENST00000553605 LRRIQ3A6PVS8 624 aaPredicted RBP14.31□□□□□ -0.12
PRPF39-204ENST00000553605 K7ESM1 405 aa14.31□□□□□ -0.12
PRPF39-204ENST00000553605 SCAMP1O15126 338 aa14.31□□□□□ -0.12
PRPF39-204ENST00000553605 RNGTTO60942 597 aaKnown RBP14.31□□□□□ -0.12
PRPF39-204ENST00000553605 RTN2O75298 545 aa14.31□□□□□ -0.12
PRPF39-204ENST00000553605 RPN1P04843 607 aaKnown RBP14.31□□□□□ -0.12
PRPF39-204ENST00000553605 SRPRAP08240 638 aaKnown RBP14.31□□□□□ -0.12
PRPF39-204ENST00000553605 ITGA2BP08514 1039 aa14.31□□□□□ -0.12
PRPF39-204ENST00000553605 MZF1P28698 734 aaPredicted RBP14.31□□□□□ -0.12
PRPF39-204ENST00000553605 AFMP43652 599 aa14.31□□□□□ -0.12
PRPF39-204ENST00000553605 CLDN10P78369 228 aa14.31□□□□□ -0.12
PRPF39-204ENST00000553605 INCA1Q0VD86 236 aa14.31□□□□□ -0.12
PRPF39-204ENST00000553605 PPP1R26Q5T8A7 1209 aaPredicted RBP14.31□□□□□ -0.12
PRPF39-204ENST00000553605 SPOPLQ6IQ16 392 aa14.31□□□□□ -0.12
PRPF39-204ENST00000553605 RFWD3Q6PCD5 774 aa14.31□□□□□ -0.12
PRPF39-204ENST00000553605 TRIM69Q86WT6 500 aa14.31□□□□□ -0.12
PRPF39-204ENST00000553605 NELFCDQ8IXH7 590 aa14.31□□□□□ -0.12
PRPF39-204ENST00000553605 TPCN2Q8NHX9 752 aa14.31□□□□□ -0.12
PRPF39-204ENST00000553605 TAF4BQ92750 862 aa14.31□□□□□ -0.12
PRPF39-204ENST00000553605 PTPRN2Q92932 1015 aa14.31□□□□□ -0.12
PRPF39-204ENST00000553605 FAM131CQ96AQ9 280 aa14.31□□□□□ -0.12
PRPF39-204ENST00000553605 IRX2Q9BZI1 471 aaPredicted RBP14.31□□□□□ -0.12
PRPF39-204ENST00000553605 KCNK4Q9NYG8 393 aa14.31□□□□□ -0.12
PRPF39-204ENST00000553605 SLCO3A1Q9UIG8 710 aa14.31□□□□□ -0.12
PRPF39-204ENST00000553605 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.3□□□□□ -0.12
PRPF39-204ENST00000553605 GOLGA6L7A0A1B0GV03 622 aa14.3□□□□□ -0.12
PRPF39-204ENST00000553605 CPED1A4D0V7 1026 aa14.3□□□□□ -0.12
PRPF39-204ENST00000553605 SLC7A4O43246 635 aa14.3□□□□□ -0.12
PRPF39-204ENST00000553605 PLRG1O43660 514 aaKnown RBP14.3□□□□□ -0.12
PRPF39-204ENST00000553605 NOBOXO60393 691 aa14.3□□□□□ -0.12
PRPF39-204ENST00000553605 EXOC3O60645 756 aa14.3□□□□□ -0.12
PRPF39-204ENST00000553605 NEBLO76041 1014 aa14.3□□□□□ -0.12
PRPF39-204ENST00000553605 CTSOP43234 321 aaPredicted RBP14.3□□□□□ -0.12
PRPF39-204ENST00000553605 SRSF6Q13247 344 aaKnown RBP14.3□□□□□ -0.12
PRPF39-204ENST00000553605 ZNF177Q13360 481 aaPredicted RBP14.3□□□□□ -0.12
PRPF39-204ENST00000553605 TGIF1Q15583 401 aa14.3□□□□□ -0.12
PRPF39-204ENST00000553605 TBR1Q16650 682 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms