RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 PENKP01210 267 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-219ENST00000553488 IDEP14735 1019 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 ACO1P21399 889 aaKnown RBP7.66□□□□□ -1.18
ATXN3-219ENST00000553488 ABCG1P45844 678 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 COPAP53621 1224 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 MFAP3P55082 362 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 MYL6P60660 151 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 TNNC1P63316 161 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 CYP24A1Q07973 514 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 C19orf57Q0VDD7 668 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 PSMD6Q15008 389 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 SNRNP35Q16560 246 aaKnown RBP7.66□□□□□ -1.18
ATXN3-219ENST00000553488 GEN1Q17RS7 908 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 WDR72Q3MJ13 1102 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 SDE2Q6IQ49 451 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 IL27RAQ6UWB1 636 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 TPGS1Q6ZTW0 290 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 ACAD11Q709F0 780 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 SV2BQ7L1I2 683 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 EPM2AIP1Q7L775 607 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-219ENST00000553488 GPRIN1Q7Z2K8 1008 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 BRAPQ7Z569 592 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 FUKQ8N0W3 1084 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 ARMC10Q8N2F6 343 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 GALNT15Q8N3T1 639 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 UBASH3BQ8TF42 649 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 HPS3Q969F9 1004 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 SMARCD1Q96GM5 515 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 TMX3Q96JJ7 454 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 CDC6Q99741 560 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 SMOQ99835 787 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 SDCBP2Q9H190 292 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 MIR1-1HGQ9H1L0 117 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 NMUR1Q9HB89 426 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 CSNK1G1Q9HCP0 422 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 KRT82Q9NSB4 513 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 WDR35Q9P2L0 1181 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 EIF2B4Q9UI10 523 aaKnown RBP7.66□□□□□ -1.18
ATXN3-219ENST00000553488 DCTN4Q9UJW0 460 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 SLC27A6Q9Y2P4 619 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 R3HCC1Q9Y3T6 440 aaKnown RBP7.66□□□□□ -1.18
ATXN3-219ENST00000553488 CLIC4Q9Y696 253 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 A0A096LPE4 126 aa7.65□□□□□ -1.18
ATXN3-219ENST00000553488 A0A1W2PPZ6 126 aa7.65□□□□□ -1.18
ATXN3-219ENST00000553488 EIF4E1BA6NMX2 242 aaKnown RBP7.65□□□□□ -1.18
ATXN3-219ENST00000553488 HHLA1C9JL84 531 aa7.65□□□□□ -1.18
ATXN3-219ENST00000553488 E9PAM4 449 aa7.65□□□□□ -1.18
ATXN3-219ENST00000553488 MDM4O15151 490 aa7.65□□□□□ -1.18
ATXN3-219ENST00000553488 CYP26A1O43174 497 aa7.65□□□□□ -1.18
ATXN3-219ENST00000553488 PAPSS1O43252 624 aaPredicted RBP7.65□□□□□ -1.18
ATXN3-219ENST00000553488 TGFB1I1O43294 461 aa7.65□□□□□ -1.18
ATXN3-219ENST00000553488 ATP8B3O60423 1300 aa7.65□□□□□ -1.18
ATXN3-219ENST00000553488 DLATP10515 647 aaKnown RBP7.65□□□□□ -1.18
ATXN3-219ENST00000553488 CCDC130P13994 396 aa7.65□□□□□ -1.18
ATXN3-219ENST00000553488 PLA2G2AP14555 144 aa7.65□□□□□ -1.18
ATXN3-219ENST00000553488 PRKCHP24723 683 aa7.65□□□□□ -1.18
ATXN3-219ENST00000553488 ZNF132P52740 706 aa7.65□□□□□ -1.18
ATXN3-219ENST00000553488 CDH8P55286 799 aa7.65□□□□□ -1.18
ATXN3-219ENST00000553488 STARD3Q14849 445 aa7.65□□□□□ -1.18
ATXN3-219ENST00000553488 KIF19Q2TAC6 998 aa7.65□□□□□ -1.18
ATXN3-219ENST00000553488 FYB2Q5VWT5 728 aa7.65□□□□□ -1.18
ATXN3-219ENST00000553488 RRAGBQ5VZM2 374 aa7.65□□□□□ -1.18
ATXN3-219ENST00000553488 KLHDC10Q6PID8 442 aa7.65□□□□□ -1.18
ATXN3-219ENST00000553488 TMPRSS6Q8IU80 811 aa7.65□□□□□ -1.18
ATXN3-219ENST00000553488 PIP4K2CQ8TBX8 421 aa7.65□□□□□ -1.18
ATXN3-219ENST00000553488 PLEKHO2Q8TD55 490 aa7.65□□□□□ -1.18
ATXN3-219ENST00000553488 CCDC74AQ96AQ1 378 aa7.65□□□□□ -1.18
ATXN3-219ENST00000553488 FAM46AQ96IP4 442 aaKnown RBP7.65□□□□□ -1.18
ATXN3-219ENST00000553488 PIWIL1Q96J94 861 aaKnown RBP7.65□□□□□ -1.18
ATXN3-219ENST00000553488 CLIC6Q96NY7 704 aa7.65□□□□□ -1.18
ATXN3-219ENST00000553488 NACA2Q9H009 215 aa7.65□□□□□ -1.18
ATXN3-219ENST00000553488 PCED1AQ9H1Q7 454 aa7.65□□□□□ -1.18
ATXN3-219ENST00000553488 PRORYQ9H606 182 aa7.65□□□□□ -1.18
ATXN3-219ENST00000553488 LIN7BQ9HAP6 207 aa7.65□□□□□ -1.18
ATXN3-219ENST00000553488 KIAA1586Q9HCI6 787 aa7.65□□□□□ -1.18
ATXN3-219ENST00000553488 NPHS2Q9NP85 383 aa7.65□□□□□ -1.18
ATXN3-219ENST00000553488 AGPAT3Q9NRZ7 376 aa7.65□□□□□ -1.18
ATXN3-219ENST00000553488 PANK4Q9NVE7 773 aa7.65□□□□□ -1.18
ATXN3-219ENST00000553488 PLK2Q9NYY3 685 aa7.65□□□□□ -1.18
ATXN3-219ENST00000553488 CCDC39Q9UFE4 941 aa7.65□□□□□ -1.18
ATXN3-219ENST00000553488 HMGXB4Q9UGU5 601 aa7.65□□□□□ -1.18
ATXN3-219ENST00000553488 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.65□□□□□ -1.18
ATXN3-219ENST00000553488 MEGF11A6BM72 1044 aa7.64□□□□□ -1.19
ATXN3-219ENST00000553488 CYSRT1A8MQ03 144 aa7.64□□□□□ -1.19
ATXN3-219ENST00000553488 NPC1O15118 1278 aa7.64□□□□□ -1.19
ATXN3-219ENST00000553488 EIF3DO15371 548 aaKnown RBP eCLIP7.64□□□□□ -1.19
ATXN3-219ENST00000553488 TNFSF14O43557 240 aa7.64□□□□□ -1.19
ATXN3-219ENST00000553488 TLX3O43711 291 aaPredicted RBP7.64□□□□□ -1.19
ATXN3-219ENST00000553488 PCDHGA12O60330 932 aa7.64□□□□□ -1.19
ATXN3-219ENST00000553488 STC2O76061 302 aa7.64□□□□□ -1.19
ATXN3-219ENST00000553488 KLKB1P03952 638 aa7.64□□□□□ -1.19
ATXN3-219ENST00000553488 TNNI1P19237 187 aa7.64□□□□□ -1.19
ATXN3-219ENST00000553488 ITPKBP27987 946 aa7.64□□□□□ -1.19
ATXN3-219ENST00000553488 OXTRP30559 389 aa7.64□□□□□ -1.19
ATXN3-219ENST00000553488 ATICP31939 592 aa7.64□□□□□ -1.19
ATXN3-219ENST00000553488 GRK6P43250 576 aa7.64□□□□□ -1.19
ATXN3-219ENST00000553488 CSNK1EP49674 416 aaKnown RBP7.64□□□□□ -1.19
ATXN3-219ENST00000553488 CCT8P50990 548 aa7.64□□□□□ -1.19
ATXN3-219ENST00000553488 AFF3P51826 1226 aaKnown RBP7.64□□□□□ -1.19
ATXN3-219ENST00000553488 ZNF234Q14588 700 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms