RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 RNF8O76064 485 aa14.54□□□□□ -0.08
PTCH1-226ENST00000553011 DESP17661 470 aa14.54□□□□□ -0.08
PTCH1-226ENST00000553011 NTSR1P30989 418 aa14.54□□□□□ -0.08
PTCH1-226ENST00000553011 CSKP41240 450 aa14.54□□□□□ -0.08
PTCH1-226ENST00000553011 PXNP49023 591 aaPredicted RBP14.54□□□□□ -0.08
PTCH1-226ENST00000553011 CDH4P55283 916 aa14.54□□□□□ -0.08
PTCH1-226ENST00000553011 NRG1Q02297 640 aaPredicted RBP14.54□□□□□ -0.08
PTCH1-226ENST00000553011 SCAPQ12770 1279 aa14.54□□□□□ -0.08
PTCH1-226ENST00000553011 EIF4HQ15056 248 aaKnown RBP14.54□□□□□ -0.08
PTCH1-226ENST00000553011 HSF5Q4G112 596 aaPredicted RBP14.54□□□□□ -0.08
PTCH1-226ENST00000553011 PITRM1Q5JRX3 1037 aa14.54□□□□□ -0.08
PTCH1-226ENST00000553011 EOGTQ5NDL2 527 aa14.54□□□□□ -0.08
PTCH1-226ENST00000553011 ACBD5Q5T8D3 534 aaPredicted RBP14.54□□□□□ -0.08
PTCH1-226ENST00000553011 MANEALQ5VSG8 457 aa14.54□□□□□ -0.08
PTCH1-226ENST00000553011 HEATR6Q6AI08 1181 aaKnown RBP14.54□□□□□ -0.08
PTCH1-226ENST00000553011 CXorf57Q6NSI4 855 aaKnown RBP14.54□□□□□ -0.08
PTCH1-226ENST00000553011 TRMT11Q7Z4G4 463 aaKnown RBP14.54□□□□□ -0.08
PTCH1-226ENST00000553011 CHPFQ8IZ52 775 aa14.54□□□□□ -0.08
PTCH1-226ENST00000553011 APCDD1Q8J025 514 aa14.54□□□□□ -0.08
PTCH1-226ENST00000553011 OR52K2Q8NGK3 314 aa14.54□□□□□ -0.08
PTCH1-226ENST00000553011 CYB5D2Q8WUJ1 264 aa14.54□□□□□ -0.08
PTCH1-226ENST00000553011 ATOH1Q92858 354 aaPredicted RBP14.54□□□□□ -0.08
PTCH1-226ENST00000553011 GPATCH2LQ9NWQ4 482 aa14.54□□□□□ -0.08
PTCH1-226ENST00000553011 KIAA1522Q9P206 1035 aaPredicted RBP14.54□□□□□ -0.08
PTCH1-226ENST00000553011 CTTNBP2NLQ9P2B4 639 aa14.54□□□□□ -0.08
PTCH1-226ENST00000553011 THAP10Q9P2Z0 257 aaPredicted RBP14.54□□□□□ -0.08
PTCH1-226ENST00000553011 PCSK1NQ9UHG2 260 aa14.54□□□□□ -0.08
PTCH1-226ENST00000553011 ANAPC7Q9UJX3 599 aa14.54□□□□□ -0.08
PTCH1-226ENST00000553011 FZD10Q9ULW2 581 aa14.54□□□□□ -0.08
PTCH1-226ENST00000553011 ZFHX2Q9C0A1 2572 aaPredicted RBP14.54□□□□□ -0.08
PTCH1-226ENST00000553011 EP300Q09472 2414 aaPredicted RBP14.53□□□□□ -0.08
PTCH1-226ENST00000553011 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.53□□□□□ -0.08
PTCH1-226ENST00000553011 TIMM44O43615 452 aa14.53□□□□□ -0.08
PTCH1-226ENST00000553011 LRCH4O75427 683 aa14.53□□□□□ -0.08
PTCH1-226ENST00000553011 TMEM253P0C7T8 217 aa14.53□□□□□ -0.08
PTCH1-226ENST00000553011 HOXB2P14652 356 aa14.53□□□□□ -0.08
PTCH1-226ENST00000553011 POLR2EP19388 210 aaKnown RBP14.53□□□□□ -0.08
PTCH1-226ENST00000553011 FECHP22830 423 aa14.53□□□□□ -0.08
PTCH1-226ENST00000553011 MZF1P28698 734 aaPredicted RBP14.53□□□□□ -0.08
PTCH1-226ENST00000553011 MIPP30301 263 aa14.53□□□□□ -0.08
PTCH1-226ENST00000553011 IL12RB1P42701 662 aa14.53□□□□□ -0.08
PTCH1-226ENST00000553011 FNTBP49356 437 aa14.53□□□□□ -0.08
PTCH1-226ENST00000553011 ZNF177Q13360 481 aaPredicted RBP14.53□□□□□ -0.08
PTCH1-226ENST00000553011 ZNF234Q14588 700 aa14.53□□□□□ -0.08
PTCH1-226ENST00000553011 CRY1Q16526 586 aa14.53□□□□□ -0.08
PTCH1-226ENST00000553011 PLEKHG6Q3KR16 790 aa14.53□□□□□ -0.08
PTCH1-226ENST00000553011 ZNF528Q3MIS6 628 aa14.53□□□□□ -0.08
PTCH1-226ENST00000553011 EFHC2Q5JST6 749 aa14.53□□□□□ -0.08
PTCH1-226ENST00000553011 CYP4V2Q6ZWL3 525 aaPredicted RBP14.53□□□□□ -0.08
PTCH1-226ENST00000553011 TFAP2DQ7Z6R9 452 aa14.53□□□□□ -0.08
PTCH1-226ENST00000553011 ZNF564Q8TBZ8 553 aaPredicted RBP14.53□□□□□ -0.08
PTCH1-226ENST00000553011 NELL1Q92832 810 aa14.53□□□□□ -0.08
PTCH1-226ENST00000553011 ZNF212Q9UDV6 495 aa14.53□□□□□ -0.08
PTCH1-226ENST00000553011 NEU3Q9UQ49 428 aa14.53□□□□□ -0.08
PTCH1-226ENST00000553011 RAD54BQ9Y620 910 aa14.53□□□□□ -0.08
PTCH1-226ENST00000553011 STON1Q9Y6Q2 735 aa14.53□□□□□ -0.08
PTCH1-226ENST00000553011 R4GN57 208 aa14.53□□□□□ -0.08
PTCH1-226ENST00000553011 PIEZO1Q92508 2521 aa14.53□□□□□ -0.08
PTCH1-226ENST00000553011 FAM186AA6NE01 2351 aa14.52□□□□□ -0.08
PTCH1-226ENST00000553011 SOWAHDA6NJG2 315 aa14.52□□□□□ -0.09
PTCH1-226ENST00000553011 LRIG2O94898 1065 aa14.52□□□□□ -0.09
PTCH1-226ENST00000553011 RHOCP08134 193 aa14.52□□□□□ -0.09
PTCH1-226ENST00000553011 TCF4P15884 667 aa14.52□□□□□ -0.09
PTCH1-226ENST00000553011 CTSOP43234 321 aaPredicted RBP14.52□□□□□ -0.09
PTCH1-226ENST00000553011 NHLH1Q02575 133 aa14.52□□□□□ -0.09
PTCH1-226ENST00000553011 CA9Q16790 459 aa14.52□□□□□ -0.09
PTCH1-226ENST00000553011 PTPRNQ16849 979 aa14.52□□□□□ -0.09
PTCH1-226ENST00000553011 KIAA1211LQ6NV74 962 aa14.52□□□□□ -0.09
PTCH1-226ENST00000553011 RWDD4Q6NW29 188 aaKnown RBP14.52□□□□□ -0.09
PTCH1-226ENST00000553011 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.52□□□□□ -0.09
PTCH1-226ENST00000553011 CPNE8Q86YQ8 564 aa14.52□□□□□ -0.09
PTCH1-226ENST00000553011 TSTD1Q8NFU3 115 aa14.52□□□□□ -0.09
PTCH1-226ENST00000553011 TTC17Q96AE7 1141 aa14.52□□□□□ -0.09
PTCH1-226ENST00000553011 TBC1D31Q96DN5 1066 aa14.52□□□□□ -0.09
PTCH1-226ENST00000553011 ALG14Q96F25 216 aa14.52□□□□□ -0.09
PTCH1-226ENST00000553011 GABRG3Q99928 467 aa14.52□□□□□ -0.09
PTCH1-226ENST00000553011 SNRNP25Q9BV90 132 aaKnown RBP14.52□□□□□ -0.09
PTCH1-226ENST00000553011 ZYG11BQ9C0D3 744 aa14.52□□□□□ -0.09
PTCH1-226ENST00000553011 IRF2BPLQ9H1B7 796 aa14.52□□□□□ -0.09
PTCH1-226ENST00000553011 OSGEPQ9NPF4 335 aa14.52□□□□□ -0.09
PTCH1-226ENST00000553011 ZSCAN32Q9NX65 697 aa14.52□□□□□ -0.09
PTCH1-226ENST00000553011 IMPACTQ9P2X3 320 aa14.52□□□□□ -0.09
PTCH1-226ENST00000553011 UVRAGQ9P2Y5 699 aa14.52□□□□□ -0.09
PTCH1-226ENST00000553011 PPARGC1AQ9UBK2 798 aaKnown RBP14.52□□□□□ -0.09
PTCH1-226ENST00000553011 IP6K2Q9UHH9 426 aa14.52□□□□□ -0.09
PTCH1-226ENST00000553011 AP4E1Q9UPM8 1137 aa14.52□□□□□ -0.09
PTCH1-226ENST00000553011 TBC1D30Q9Y2I9 924 aa14.52□□□□□ -0.09
PTCH1-226ENST00000553011 ARIH1Q9Y4X5 557 aaPredicted RBP14.52□□□□□ -0.09
PTCH1-226ENST00000553011 WDR87Q6ZQQ6 2873 aa14.52□□□□□ -0.09
PTCH1-226ENST00000553011 OTOGLQ3ZCN5 2332 aa14.52□□□□□ -0.09
PTCH1-226ENST00000553011 NUMA1Q14980 2115 aa14.51□□□□□ -0.09
PTCH1-226ENST00000553011 THADAQ6YHU6 1953 aa14.51□□□□□ -0.09
PTCH1-226ENST00000553011 PLXND1Q9Y4D7 1925 aa14.51□□□□□ -0.09
PTCH1-226ENST00000553011 A0A1W2PQF6 199 aa14.51□□□□□ -0.09
PTCH1-226ENST00000553011 MYO1FO00160 1098 aa14.51□□□□□ -0.09
PTCH1-226ENST00000553011 CREB3O43889 395 aa14.51□□□□□ -0.09
PTCH1-226ENST00000553011 PRPSAP2O60256 369 aa14.51□□□□□ -0.09
PTCH1-226ENST00000553011 MOCS3O95396 460 aa14.51□□□□□ -0.09
PTCH1-226ENST00000553011 APBB3O95704 486 aa14.51□□□□□ -0.09
PTCH1-226ENST00000553011 ATP5BP06576 529 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms