RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 EIF4A3P38919 411 aaKnown RBP19.04■□□□□ 0.64
PRPF40B-216ENST00000552301 CSKP41240 450 aa19.04■□□□□ 0.64
PRPF40B-216ENST00000552301 IL12RB1P42701 662 aa19.04■□□□□ 0.64
PRPF40B-216ENST00000552301 MRE11P49959 708 aa19.04■□□□□ 0.64
PRPF40B-216ENST00000552301 ST8SIA6P61647 398 aa19.04■□□□□ 0.64
PRPF40B-216ENST00000552301 SLC12A1Q13621 1099 aa19.04■□□□□ 0.64
PRPF40B-216ENST00000552301 SIM2Q14190 667 aaPredicted RBP19.04■□□□□ 0.64
PRPF40B-216ENST00000552301 FSCBQ5H9T9 825 aa19.04■□□□□ 0.64
PRPF40B-216ENST00000552301 PITRM1Q5JRX3 1037 aa19.04■□□□□ 0.64
PRPF40B-216ENST00000552301 CCDC122Q5T0U0 273 aa19.04■□□□□ 0.64
PRPF40B-216ENST00000552301 RNF219Q5W0B1 726 aaPredicted RBP19.04■□□□□ 0.64
PRPF40B-216ENST00000552301 ALKBH5Q6P6C2 394 aaKnown RBP19.04■□□□□ 0.64
PRPF40B-216ENST00000552301 KIAA0907Q7Z7F0 614 aaPredicted RBP19.04■□□□□ 0.64
PRPF40B-216ENST00000552301 RASSF3Q86WH2 238 aa19.04■□□□□ 0.64
PRPF40B-216ENST00000552301 MDGA1Q8NFP4 955 aa19.04■□□□□ 0.64
PRPF40B-216ENST00000552301 GAB3Q8WWW8 586 aa19.04■□□□□ 0.64
PRPF40B-216ENST00000552301 NTAN1Q96AB6 310 aa19.04■□□□□ 0.64
PRPF40B-216ENST00000552301 TPSD1Q9BZJ3 242 aa19.04■□□□□ 0.64
PRPF40B-216ENST00000552301 EPC1Q9H2F5 836 aa19.04■□□□□ 0.64
PRPF40B-216ENST00000552301 SMG5Q9UPR3 1016 aaKnown RBP19.04■□□□□ 0.64
PRPF40B-216ENST00000552301 RAD54BQ9Y620 910 aa19.04■□□□□ 0.64
PRPF40B-216ENST00000552301 PRR23AA6NEV1 266 aa19.03■□□□□ 0.64
PRPF40B-216ENST00000552301 AKR1B15C9JRZ8 316 aaPredicted RBP19.03■□□□□ 0.64
PRPF40B-216ENST00000552301 I6L893 689 aaPredicted RBP19.03■□□□□ 0.64
PRPF40B-216ENST00000552301 AKR1B10O60218 316 aa19.03■□□□□ 0.64
PRPF40B-216ENST00000552301 EPHX1P07099 455 aa19.03■□□□□ 0.64
PRPF40B-216ENST00000552301 ADKP55263 362 aaKnown RBP19.03■□□□□ 0.64
PRPF40B-216ENST00000552301 PLEKHG6Q3KR16 790 aa19.03■□□□□ 0.64
PRPF40B-216ENST00000552301 C5orf22Q49AR2 442 aa19.03■□□□□ 0.64
PRPF40B-216ENST00000552301 USP39Q53GS9 565 aaKnown RBP19.03■□□□□ 0.64
PRPF40B-216ENST00000552301 RAB6CQ53S08 254 aa19.03■□□□□ 0.64
PRPF40B-216ENST00000552301 EFHC2Q5JST6 749 aa19.03■□□□□ 0.64
PRPF40B-216ENST00000552301 SLFN11Q7Z7L1 901 aa19.03■□□□□ 0.64
PRPF40B-216ENST00000552301 ERLEC1Q96DZ1 483 aa19.03■□□□□ 0.64
PRPF40B-216ENST00000552301 SPACA7Q96KW9 195 aa19.03■□□□□ 0.64
PRPF40B-216ENST00000552301 RAB6CQ9H0N0 254 aa19.03■□□□□ 0.64
PRPF40B-216ENST00000552301 A0A1W2PQF6 199 aa19.02■□□□□ 0.64
PRPF40B-216ENST00000552301 SSU72P8A0A1W2PR75 194 aa19.02■□□□□ 0.64
PRPF40B-216ENST00000552301 WASH3PC4AMC7 463 aa19.02■□□□□ 0.64
PRPF40B-216ENST00000552301 RNF8O76064 485 aa19.02■□□□□ 0.64
PRPF40B-216ENST00000552301 RHOCP08134 193 aa19.02■□□□□ 0.64
PRPF40B-216ENST00000552301 PRKCHP24723 683 aa19.02■□□□□ 0.64
PRPF40B-216ENST00000552301 IRAK1P51617 712 aa19.02■□□□□ 0.64
PRPF40B-216ENST00000552301 ZNF75DP51815 510 aa19.02■□□□□ 0.64
PRPF40B-216ENST00000552301 OGDHQ02218 1023 aa19.02■□□□□ 0.64
PRPF40B-216ENST00000552301 SRSF5Q13243 272 aaKnown RBP19.02■□□□□ 0.64
PRPF40B-216ENST00000552301 KIAA1211LQ6NV74 962 aa19.02■□□□□ 0.64
PRPF40B-216ENST00000552301 TFAP2DQ7Z6R9 452 aa19.02■□□□□ 0.64
PRPF40B-216ENST00000552301 ALYREFQ86V81 257 aaKnown RBP19.02■□□□□ 0.64
PRPF40B-216ENST00000552301 GAS2L3Q86XJ1 694 aa19.02■□□□□ 0.64
PRPF40B-216ENST00000552301 CCDC185Q8N715 623 aa19.02■□□□□ 0.64
PRPF40B-216ENST00000552301 FNIP1Q8TF40 1166 aa19.02■□□□□ 0.64
PRPF40B-216ENST00000552301 TTC17Q96AE7 1141 aa19.02■□□□□ 0.64
PRPF40B-216ENST00000552301 LMLNQ96KR4 655 aa19.02■□□□□ 0.64
PRPF40B-216ENST00000552301 HINFPQ9BQA5 517 aa19.02■□□□□ 0.64
PRPF40B-216ENST00000552301 ZYG11BQ9C0D3 744 aa19.02■□□□□ 0.64
PRPF40B-216ENST00000552301 MUC3BQ9H195 1237 aa19.02■□□□□ 0.64
PRPF40B-216ENST00000552301 OSBPL2Q9H1P3 480 aa19.02■□□□□ 0.64
PRPF40B-216ENST00000552301 OR12D3Q9UGF7 316 aa19.02■□□□□ 0.64
PRPF40B-216ENST00000552301 IGLV3-10A0A075B6K4 115 aa19.01■□□□□ 0.63
PRPF40B-216ENST00000552301 TMEM191CA6NGB0 347 aa19.01■□□□□ 0.63
PRPF40B-216ENST00000552301 AP5Z1O43299 807 aa19.01■□□□□ 0.63
PRPF40B-216ENST00000552301 HRO43593 1189 aa19.01■□□□□ 0.63
PRPF40B-216ENST00000552301 CNTN5O94779 1100 aa19.01■□□□□ 0.63
PRPF40B-216ENST00000552301 HLA-EP13747 358 aa19.01■□□□□ 0.63
PRPF40B-216ENST00000552301 NNMTP40261 264 aa19.01■□□□□ 0.63
PRPF40B-216ENST00000552301 AIF1P55008 147 aa19.01■□□□□ 0.63
PRPF40B-216ENST00000552301 GFPT1Q06210 699 aaPredicted RBP19.01■□□□□ 0.63
PRPF40B-216ENST00000552301 SULT2A1Q06520 285 aa19.01■□□□□ 0.63
PRPF40B-216ENST00000552301 ENPP2Q13822 863 aa19.01■□□□□ 0.63
PRPF40B-216ENST00000552301 BYSLQ13895 437 aaKnown RBP19.01■□□□□ 0.63
PRPF40B-216ENST00000552301 ARID5BQ14865 1188 aa19.01■□□□□ 0.63
PRPF40B-216ENST00000552301 SLC18A3Q16572 532 aa19.01■□□□□ 0.63
PRPF40B-216ENST00000552301 ALFQ53S48 1182 aa19.01■□□□□ 0.63
PRPF40B-216ENST00000552301 C6orf118Q5T5N4 469 aa19.01■□□□□ 0.63
PRPF40B-216ENST00000552301 CXorf57Q6NSI4 855 aaKnown RBP19.01■□□□□ 0.63
PRPF40B-216ENST00000552301 RWDD4Q6NW29 188 aaKnown RBP19.01■□□□□ 0.63
PRPF40B-216ENST00000552301 KIAA1324Q6UXG2 1013 aaKnown RBP19.01■□□□□ 0.63
PRPF40B-216ENST00000552301 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.01■□□□□ 0.63
PRPF40B-216ENST00000552301 C11orf74Q86VG3 221 aa19.01■□□□□ 0.63
PRPF40B-216ENST00000552301 ZNF683Q8IZ20 524 aa19.01■□□□□ 0.63
PRPF40B-216ENST00000552301 MRFAP1L1Q96HT8 127 aa19.01■□□□□ 0.63
PRPF40B-216ENST00000552301 CCDC42Q96M95 316 aa19.01■□□□□ 0.63
PRPF40B-216ENST00000552301 NCAPGQ9BPX3 1015 aa19.01■□□□□ 0.63
PRPF40B-216ENST00000552301 THAP2Q9H0W7 228 aa19.01■□□□□ 0.63
PRPF40B-216ENST00000552301 MPP6Q9NZW5 540 aa19.01■□□□□ 0.63
PRPF40B-216ENST00000552301 NCDNQ9UBB6 729 aa19.01■□□□□ 0.63
PRPF40B-216ENST00000552301 VPS28Q9UK41 221 aa19.01■□□□□ 0.63
PRPF40B-216ENST00000552301 GMEB2Q9UKD1 530 aa19.01■□□□□ 0.63
PRPF40B-216ENST00000552301 INTS6Q9UL03 887 aaKnown RBP19.01■□□□□ 0.63
PRPF40B-216ENST00000552301 DRGXA6NNA5 263 aa19■□□□□ 0.63
PRPF40B-216ENST00000552301 GABRG2P18507 467 aa19■□□□□ 0.63
PRPF40B-216ENST00000552301 MZF1P28698 734 aaPredicted RBP19■□□□□ 0.63
PRPF40B-216ENST00000552301 OR1E1P30953 314 aa19■□□□□ 0.63
PRPF40B-216ENST00000552301 ECT2LQ008S8 904 aa19■□□□□ 0.63
PRPF40B-216ENST00000552301 NRG1Q02297 640 aaPredicted RBP19■□□□□ 0.63
PRPF40B-216ENST00000552301 SCAPQ12770 1279 aa19■□□□□ 0.63
PRPF40B-216ENST00000552301 MAPK8IP2Q13387 824 aaPredicted RBP19■□□□□ 0.63
PRPF40B-216ENST00000552301 LPAL2Q16609 132 aa19■□□□□ 0.63
PRPF40B-216ENST00000552301 PTPRNQ16849 979 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms