RNA–Protein interactions for RNA: ENST00000551634.5

NPAS3-211, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene NPAS3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-211ENST00000551634 RAG1P15918 1043 aa24.19■■□□□ 1.46
NPAS3-211ENST00000551634 LIMK2P53671 638 aa24.19■■□□□ 1.46
NPAS3-211ENST00000551634 AQP4P55087 323 aa24.19■■□□□ 1.46
NPAS3-211ENST00000551634 LRRC36Q1X8D7 754 aa24.19■■□□□ 1.46
NPAS3-211ENST00000551634 NME8Q8N427 588 aa24.19■■□□□ 1.46
NPAS3-211ENST00000551634 LRRC40Q9H9A6 602 aa24.19■■□□□ 1.46
NPAS3-211ENST00000551634 AP1G1O43747 822 aa24.19■■□□□ 1.46
NPAS3-211ENST00000551634 CAPN15O75808 1086 aa24.19■■□□□ 1.46
NPAS3-211ENST00000551634 VTNP04004 478 aa24.19■■□□□ 1.46
NPAS3-211ENST00000551634 MLH1P40692 756 aa24.19■■□□□ 1.46
NPAS3-211ENST00000551634 MATKP42679 507 aa24.19■■□□□ 1.46
NPAS3-211ENST00000551634 TRIP10Q15642 601 aa24.19■■□□□ 1.46
NPAS3-211ENST00000551634 DCAF4L1Q3SXM0 396 aa24.19■■□□□ 1.46
NPAS3-211ENST00000551634 BSPRYQ5W0U4 402 aa24.19■■□□□ 1.46
NPAS3-211ENST00000551634 C7orf31Q8N865 590 aa24.19■■□□□ 1.46
NPAS3-211ENST00000551634 SHCBP1LQ9BZQ2 653 aa24.19■■□□□ 1.46
NPAS3-211ENST00000551634 R3HDMLQ9H3Y0 253 aa24.19■■□□□ 1.46
NPAS3-211ENST00000551634 COMMD3-BMI1R4GMX3 469 aa24.19■■□□□ 1.46
NPAS3-211ENST00000551634 IRF6O14896 467 aa24.18■■□□□ 1.46
NPAS3-211ENST00000551634 ADCY6O43306 1168 aa24.18■■□□□ 1.46
NPAS3-211ENST00000551634 SORBS2O94875 1100 aaKnown RBP24.18■■□□□ 1.46
NPAS3-211ENST00000551634 HSPA4LO95757 839 aa24.18■■□□□ 1.46
NPAS3-211ENST00000551634 LCP1P13796 627 aa24.18■■□□□ 1.46
NPAS3-211ENST00000551634 MMEL1Q495T6 779 aa24.18■■□□□ 1.46
NPAS3-211ENST00000551634 CRYBG2Q8N1P7 616 aa24.18■■□□□ 1.46
NPAS3-211ENST00000551634 TRPM4Q8TD43 1214 aa24.18■■□□□ 1.46
NPAS3-211ENST00000551634 HAPLN3Q96S86 360 aa24.18■■□□□ 1.46
NPAS3-211ENST00000551634 PIH1D1Q9NWS0 290 aaKnown RBP24.18■■□□□ 1.46
NPAS3-211ENST00000551634 PRPF19Q9UMS4 504 aaKnown RBP24.18■■□□□ 1.46
NPAS3-211ENST00000551634 SCN4AP35499 1836 aa24.18■■□□□ 1.46
NPAS3-211ENST00000551634 COL1A2P08123 1366 aa24.18■■□□□ 1.46
NPAS3-211ENST00000551634 H3BNX3 289 aa24.18■■□□□ 1.46
NPAS3-211ENST00000551634 IFRD2Q12894 506 aaPredicted RBP24.18■■□□□ 1.46
NPAS3-211ENST00000551634 KCTD2Q14681 263 aa24.18■■□□□ 1.46
NPAS3-211ENST00000551634 SLC25A52Q3SY17 297 aa24.18■■□□□ 1.46
NPAS3-211ENST00000551634 ANKRD20A4Q4UJ75 823 aa24.18■■□□□ 1.46
NPAS3-211ENST00000551634 GADL1Q6ZQY3 521 aa24.18■■□□□ 1.46
NPAS3-211ENST00000551634 ZNF567Q8N184 647 aa24.18■■□□□ 1.46
NPAS3-211ENST00000551634 NLRP7Q8WX94 980 aa24.18■■□□□ 1.46
NPAS3-211ENST00000551634 ZNF358Q9NW07 568 aa24.18■■□□□ 1.46
NPAS3-211ENST00000551634 NDUFA13Q9P0J0 144 aa24.18■■□□□ 1.46
NPAS3-211ENST00000551634 C6orf203Q9P0P8 240 aaPredicted RBP24.18■■□□□ 1.46
NPAS3-211ENST00000551634 ZBTB14O43829 449 aa24.17■■□□□ 1.46
NPAS3-211ENST00000551634 OGFRL1Q5TC84 451 aaPredicted RBP24.17■■□□□ 1.46
NPAS3-211ENST00000551634 CMC1Q7Z7K0 106 aa24.17■■□□□ 1.46
NPAS3-211ENST00000551634 ZNF781Q8N8C0 355 aa24.17■■□□□ 1.46
NPAS3-211ENST00000551634 RNF139Q8WU17 664 aa24.17■■□□□ 1.46
NPAS3-211ENST00000551634 MID2Q9UJV3 735 aa24.17■■□□□ 1.46
NPAS3-211ENST00000551634 KLHL33A6NCF5 533 aa24.17■■□□□ 1.46
NPAS3-211ENST00000551634 PPEF2O14830 753 aa24.17■■□□□ 1.46
NPAS3-211ENST00000551634 TRIM13O60858 407 aa24.17■■□□□ 1.46
NPAS3-211ENST00000551634 AP1G2O75843 785 aa24.17■■□□□ 1.46
NPAS3-211ENST00000551634 LGALS2P05162 132 aa24.17■■□□□ 1.46
NPAS3-211ENST00000551634 GLDCP23378 1020 aa24.17■■□□□ 1.46
NPAS3-211ENST00000551634 PAFAH1B3Q15102 231 aaKnown RBP24.17■■□□□ 1.46
NPAS3-211ENST00000551634 TCHHL1Q5QJ38 904 aaPredicted RBP24.17■■□□□ 1.46
NPAS3-211ENST00000551634 CLEC14AQ86T13 490 aa24.17■■□□□ 1.46
NPAS3-211ENST00000551634 FAM131BQ86XD5 332 aa24.17■■□□□ 1.46
NPAS3-211ENST00000551634 ICA1LQ8NDH6 482 aa24.17■■□□□ 1.46
NPAS3-211ENST00000551634 STK39Q9UEW8 545 aa24.17■■□□□ 1.46
NPAS3-211ENST00000551634 PSMD13Q9UNM6 376 aa24.17■■□□□ 1.46
NPAS3-211ENST00000551634 LTBP3Q9NS15 1303 aa24.16■■□□□ 1.46
NPAS3-211ENST00000551634 G3V2L1 256 aa24.16■■□□□ 1.46
NPAS3-211ENST00000551634 THRAP10827 490 aa24.16■■□□□ 1.46
NPAS3-211ENST00000551634 USP4Q13107 963 aa24.16■■□□□ 1.46
NPAS3-211ENST00000551634 ZBTB6Q15916 424 aa24.16■■□□□ 1.46
NPAS3-211ENST00000551634 TMEM135Q86UB9 458 aa24.16■■□□□ 1.46
NPAS3-211ENST00000551634 BEST2Q8NFU1 509 aa24.16■■□□□ 1.46
NPAS3-211ENST00000551634 NLGN2Q8NFZ4 835 aa24.16■■□□□ 1.46
NPAS3-211ENST00000551634 FCRL3Q96P31 734 aaPredicted RBP24.16■■□□□ 1.46
NPAS3-211ENST00000551634 SERPINI1Q99574 410 aa24.16■■□□□ 1.46
NPAS3-211ENST00000551634 GORASP1Q9BQQ3 440 aa24.16■■□□□ 1.46
NPAS3-211ENST00000551634 DPEP3Q9H4B8 488 aa24.16■■□□□ 1.46
NPAS3-211ENST00000551634 EPB41L1Q9H4G0 881 aa24.16■■□□□ 1.46
NPAS3-211ENST00000551634 PRDM12Q9H4Q4 367 aa24.16■■□□□ 1.46
NPAS3-211ENST00000551634 HK2P52789 917 aa24.16■■□□□ 1.46
NPAS3-211ENST00000551634 DLG1Q12959 904 aa24.16■■□□□ 1.46
NPAS3-211ENST00000551634 PDK3Q15120 406 aa24.16■■□□□ 1.46
NPAS3-211ENST00000551634 STRA8Q7Z7C7 330 aa24.16■■□□□ 1.46
NPAS3-211ENST00000551634 SERBP1Q8NC51 408 aaKnown RBP eCLIP24.16■■□□□ 1.46
NPAS3-211ENST00000551634 CCNYQ8ND76 341 aa24.16■■□□□ 1.46
NPAS3-211ENST00000551634 CNDP1Q96KN2 507 aa24.16■■□□□ 1.46
NPAS3-211ENST00000551634 SMIM31A0A1B0GVY4 71 aa24.15■■□□□ 1.46
NPAS3-211ENST00000551634 ADORA2BP29275 332 aa24.15■■□□□ 1.46
NPAS3-211ENST00000551634 CHN2P52757 468 aa24.15■■□□□ 1.46
NPAS3-211ENST00000551634 LAMC2Q13753 1193 aa24.15■■□□□ 1.46
NPAS3-211ENST00000551634 SLC9B1Q4ZJI4 515 aa24.15■■□□□ 1.46
NPAS3-211ENST00000551634 FSTL4Q6MZW2 842 aa24.15■■□□□ 1.46
NPAS3-211ENST00000551634 PLD6Q8N2A8 252 aaKnown RBP24.15■■□□□ 1.46
NPAS3-211ENST00000551634 STON2Q8WXE9 905 aa24.15■■□□□ 1.46
NPAS3-211ENST00000551634 TCF7L2Q9NQB0 619 aa24.15■■□□□ 1.46
NPAS3-211ENST00000551634 SEPT10Q9P0V9 454 aa24.15■■□□□ 1.46
NPAS3-211ENST00000551634 SLC22A2O15244 555 aa24.15■■□□□ 1.46
NPAS3-211ENST00000551634 SULT1E1P49888 294 aa24.15■■□□□ 1.46
NPAS3-211ENST00000551634 CES3Q6UWW8 571 aa24.15■■□□□ 1.46
NPAS3-211ENST00000551634 TMEM126BQ8IUX1 230 aa24.15■■□□□ 1.46
NPAS3-211ENST00000551634 TNS4Q8IZW8 715 aa24.15■■□□□ 1.46
NPAS3-211ENST00000551634 ZMAT2Q96NC0 199 aaKnown RBP24.15■■□□□ 1.46
NPAS3-211ENST00000551634 DNAI2Q9GZS0 605 aa24.15■■□□□ 1.46
NPAS3-211ENST00000551634 PDGFCQ9NRA1 345 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms