RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 PLEKHG6Q3KR16 790 aa19.59■□□□□ 0.73
DDX54-208ENST00000551344 TRNP1Q6NT89 227 aa19.59■□□□□ 0.73
DDX54-208ENST00000551344 IRF2BP2Q7Z5L9 587 aa19.59■□□□□ 0.73
DDX54-208ENST00000551344 BAP1Q92560 729 aa19.59■□□□□ 0.73
DDX54-208ENST00000551344 IGSF8Q969P0 613 aa19.59■□□□□ 0.73
DDX54-208ENST00000551344 C11orf70Q9BRQ4 267 aa19.59■□□□□ 0.73
DDX54-208ENST00000551344 CBX8Q9HC52 389 aa19.59■□□□□ 0.73
DDX54-208ENST00000551344 USP36Q9P275 1121 aaKnown RBP19.59■□□□□ 0.73
DDX54-208ENST00000551344 PLXND1Q9Y4D7 1925 aa19.59■□□□□ 0.73
DDX54-208ENST00000551344 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.58■□□□□ 0.72
DDX54-208ENST00000551344 NDUFS2O75306 463 aa19.58■□□□□ 0.72
DDX54-208ENST00000551344 CLDN11O75508 207 aa19.58■□□□□ 0.72
DDX54-208ENST00000551344 CALB1P05937 261 aa19.58■□□□□ 0.72
DDX54-208ENST00000551344 ACADMP11310 421 aa19.58■□□□□ 0.72
DDX54-208ENST00000551344 CD6P30203 668 aa19.58■□□□□ 0.72
DDX54-208ENST00000551344 RDXP35241 583 aaKnown RBP19.58■□□□□ 0.72
DDX54-208ENST00000551344 PTGER3P43115 390 aa19.58■□□□□ 0.72
DDX54-208ENST00000551344 ECT2LQ008S8 904 aa19.58■□□□□ 0.72
DDX54-208ENST00000551344 SULT2A1Q06520 285 aa19.58■□□□□ 0.72
DDX54-208ENST00000551344 ZNF177Q13360 481 aaPredicted RBP19.58■□□□□ 0.72
DDX54-208ENST00000551344 AASDHQ4L235 1098 aaPredicted RBP19.58■□□□□ 0.72
DDX54-208ENST00000551344 LYSMD4Q5XG99 296 aa19.58■□□□□ 0.72
DDX54-208ENST00000551344 ERMP1Q7Z2K6 904 aa19.58■□□□□ 0.72
DDX54-208ENST00000551344 C14orf80Q86SX3 495 aa19.58■□□□□ 0.72
DDX54-208ENST00000551344 SYT12Q8IV01 421 aa19.58■□□□□ 0.72
DDX54-208ENST00000551344 PIGKQ92643 395 aa19.58■□□□□ 0.72
DDX54-208ENST00000551344 MYO19Q96H55 970 aa19.58■□□□□ 0.72
DDX54-208ENST00000551344 ZNF419Q96HQ0 510 aaPredicted RBP19.58■□□□□ 0.72
DDX54-208ENST00000551344 CFAP57Q96MR6 1250 aa19.58■□□□□ 0.72
DDX54-208ENST00000551344 HAPLN3Q96S86 360 aa19.58■□□□□ 0.72
DDX54-208ENST00000551344 RTKNQ9BST9 563 aa19.58■□□□□ 0.72
DDX54-208ENST00000551344 EDEM3Q9BZQ6 932 aa19.58■□□□□ 0.72
DDX54-208ENST00000551344 PRSS16Q9NQE7 514 aa19.58■□□□□ 0.72
DDX54-208ENST00000551344 ANLNQ9NQW6 1124 aa19.58■□□□□ 0.72
DDX54-208ENST00000551344 METTL5Q9NRN9 209 aaKnown RBP19.58■□□□□ 0.72
DDX54-208ENST00000551344 SEPT11Q9NVA2 429 aaKnown RBP19.58■□□□□ 0.72
DDX54-208ENST00000551344 ERVW-1Q9UQF0 538 aa19.58■□□□□ 0.72
DDX54-208ENST00000551344 DRGXA6NNA5 263 aa19.57■□□□□ 0.72
DDX54-208ENST00000551344 KHNYNO15037 678 aaKnown RBP19.57■□□□□ 0.72
DDX54-208ENST00000551344 IGLV3-19P01714 112 aa19.57■□□□□ 0.72
DDX54-208ENST00000551344 KRT3P12035 628 aa19.57■□□□□ 0.72
DDX54-208ENST00000551344 PDGFRAP16234 1089 aa19.57■□□□□ 0.72
DDX54-208ENST00000551344 HOXD12P35452 270 aa19.57■□□□□ 0.72
DDX54-208ENST00000551344 TPMTP51580 245 aa19.57■□□□□ 0.72
DDX54-208ENST00000551344 LIMK1P53667 647 aa19.57■□□□□ 0.72
DDX54-208ENST00000551344 ATXN1P54253 815 aaKnown RBP19.57■□□□□ 0.72
DDX54-208ENST00000551344 CDH4P55283 916 aa19.57■□□□□ 0.72
DDX54-208ENST00000551344 ZBTB16Q05516 673 aa19.57■□□□□ 0.72
DDX54-208ENST00000551344 ZNF33AQ06730 810 aa19.57■□□□□ 0.72
DDX54-208ENST00000551344 C1QBPQ07021 282 aaKnown RBP19.57■□□□□ 0.72
DDX54-208ENST00000551344 HNRNPA1L2Q32P51 320 aaKnown RBP19.57■□□□□ 0.72
DDX54-208ENST00000551344 LRRC31Q6UY01 552 aa19.57■□□□□ 0.72
DDX54-208ENST00000551344 APCDD1Q8J025 514 aa19.57■□□□□ 0.72
DDX54-208ENST00000551344 EMC1Q8N766 993 aa19.57■□□□□ 0.72
DDX54-208ENST00000551344 ZNF366Q8N895 744 aa19.57■□□□□ 0.72
DDX54-208ENST00000551344 RXFP2Q8WXD0 754 aa19.57■□□□□ 0.72
DDX54-208ENST00000551344 MRGPRX3Q96LB0 322 aa19.57■□□□□ 0.72
DDX54-208ENST00000551344 NUP58Q9BVL2 599 aa19.57■□□□□ 0.72
DDX54-208ENST00000551344 SMOC1Q9H4F8 434 aa19.57■□□□□ 0.72
DDX54-208ENST00000551344 WSB2Q9NYS7 404 aaPredicted RBP19.57■□□□□ 0.72
DDX54-208ENST00000551344 TBC1D30Q9Y2I9 924 aa19.57■□□□□ 0.72
DDX54-208ENST00000551344 CKAP5Q14008 2032 aa19.57■□□□□ 0.72
DDX54-208ENST00000551344 TARSL2A2RTX5 802 aaKnown RBP19.56■□□□□ 0.72
DDX54-208ENST00000551344 C2CD4BA6NLJ0 364 aa19.56■□□□□ 0.72
DDX54-208ENST00000551344 SIGLEC16A6NMB1 481 aa19.56■□□□□ 0.72
DDX54-208ENST00000551344 I6L893 689 aaPredicted RBP19.56■□□□□ 0.72
DDX54-208ENST00000551344 SLC30A4O14863 429 aa19.56■□□□□ 0.72
DDX54-208ENST00000551344 GDF9O60383 454 aa19.56■□□□□ 0.72
DDX54-208ENST00000551344 SDC4P31431 198 aa19.56■□□□□ 0.72
DDX54-208ENST00000551344 NNMTP40261 264 aa19.56■□□□□ 0.72
DDX54-208ENST00000551344 PTPN9P43378 593 aa19.56■□□□□ 0.72
DDX54-208ENST00000551344 CCDC14Q49A88 953 aa19.56■□□□□ 0.72
DDX54-208ENST00000551344 RNF219Q5W0B1 726 aaPredicted RBP19.56■□□□□ 0.72
DDX54-208ENST00000551344 ACAD10Q6JQN1 1059 aa19.56■□□□□ 0.72
DDX54-208ENST00000551344 CXorf57Q6NSI4 855 aaKnown RBP19.56■□□□□ 0.72
DDX54-208ENST00000551344 PPP1R2P3Q6NXS1 205 aa19.56■□□□□ 0.72
DDX54-208ENST00000551344 ARMCX6Q7L4S7 300 aa19.56■□□□□ 0.72
DDX54-208ENST00000551344 PHLDB2Q86SQ0 1253 aa19.56■□□□□ 0.72
DDX54-208ENST00000551344 LUZP1Q86V48 1076 aa19.56■□□□□ 0.72
DDX54-208ENST00000551344 CIR1Q86X95 450 aaPredicted RBP19.56■□□□□ 0.72
DDX54-208ENST00000551344 ZNF683Q8IZ20 524 aa19.56■□□□□ 0.72
DDX54-208ENST00000551344 C3orf20Q8ND61 904 aa19.56■□□□□ 0.72
DDX54-208ENST00000551344 FOXJ1Q92949 421 aa19.56■□□□□ 0.72
DDX54-208ENST00000551344 TOE1Q96GM8 510 aaKnown RBP19.56■□□□□ 0.72
DDX54-208ENST00000551344 FEM1AQ9BSK4 669 aa19.56■□□□□ 0.72
DDX54-208ENST00000551344 CD93Q9NPY3 652 aa19.56■□□□□ 0.72
DDX54-208ENST00000551344 AIPL1Q9NZN9 384 aa19.56■□□□□ 0.72
DDX54-208ENST00000551344 EVLQ9UI08 416 aaPredicted RBP19.56■□□□□ 0.72
DDX54-208ENST00000551344 PILRBQ9UKJ0 227 aa19.56■□□□□ 0.72
DDX54-208ENST00000551344 DMXL1Q9Y485 3027 aa19.55■□□□□ 0.72
DDX54-208ENST00000551344 GOLGA6L19H0YKK7 550 aa19.55■□□□□ 0.72
DDX54-208ENST00000551344 TNFAIP3P21580 790 aa19.55■□□□□ 0.72
DDX54-208ENST00000551344 MZF1P28698 734 aaPredicted RBP19.55■□□□□ 0.72
DDX54-208ENST00000551344 CTSOP43234 321 aaPredicted RBP19.55■□□□□ 0.72
DDX54-208ENST00000551344 VASPP50552 380 aaPredicted RBP19.55■□□□□ 0.72
DDX54-208ENST00000551344 ATP11AP98196 1134 aa19.55■□□□□ 0.72
DDX54-208ENST00000551344 FANCCQ00597 558 aa19.55■□□□□ 0.72
DDX54-208ENST00000551344 FOXK2Q01167 660 aa19.55■□□□□ 0.72
DDX54-208ENST00000551344 ZSCAN23Q3MJ62 389 aa19.55■□□□□ 0.72
DDX54-208ENST00000551344 ARL13BQ3SXY8 428 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms