RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 FBXO39Q8N4B4 442 aa14.02□□□□□ -0.17
SNRPF-203ENST00000551316 ZNF548Q8NEK5 533 aaPredicted RBP14.02□□□□□ -0.17
SNRPF-203ENST00000551316 C9orf43Q8TAL5 461 aaPredicted RBP14.02□□□□□ -0.17
SNRPF-203ENST00000551316 NOC3LQ8WTT2 800 aaKnown RBP14.02□□□□□ -0.17
SNRPF-203ENST00000551316 CACTINQ8WUQ7 758 aaKnown RBP14.02□□□□□ -0.17
SNRPF-203ENST00000551316 KLK6Q92876 244 aa14.02□□□□□ -0.17
SNRPF-203ENST00000551316 GRAMD1AQ96CP6 724 aa14.02□□□□□ -0.17
SNRPF-203ENST00000551316 SMARCD1Q96GM5 515 aa14.02□□□□□ -0.17
SNRPF-203ENST00000551316 FGFBP2Q9BYJ0 223 aa14.02□□□□□ -0.17
SNRPF-203ENST00000551316 SLC2A11Q9BYW1 496 aa14.02□□□□□ -0.17
SNRPF-203ENST00000551316 KCND2Q9NZV8 630 aa14.02□□□□□ -0.17
SNRPF-203ENST00000551316 HMGXB4Q9UGU5 601 aa14.02□□□□□ -0.17
SNRPF-203ENST00000551316 RABGEF1Q9UJ41 708 aa14.02□□□□□ -0.17
SNRPF-203ENST00000551316 TUBD1Q9UJT1 453 aa14.02□□□□□ -0.17
SNRPF-203ENST00000551316 SCML1Q9UN30 329 aa14.02□□□□□ -0.17
SNRPF-203ENST00000551316 PLA2G4CQ9UP65 541 aa14.02□□□□□ -0.17
SNRPF-203ENST00000551316 UBE4BO95155 1302 aa14.01□□□□□ -0.17
SNRPF-203ENST00000551316 A0A1B0GTL3 188 aa14.01□□□□□ -0.17
SNRPF-203ENST00000551316 TTC34A8MYJ7 566 aa14.01□□□□□ -0.17
SNRPF-203ENST00000551316 TIMM44O43615 452 aa14.01□□□□□ -0.17
SNRPF-203ENST00000551316 TCEA3O75764 348 aa14.01□□□□□ -0.17
SNRPF-203ENST00000551316 VAV1P15498 845 aa14.01□□□□□ -0.17
SNRPF-203ENST00000551316 CHKAP35790 457 aa14.01□□□□□ -0.17
SNRPF-203ENST00000551316 CTSOP43234 321 aaPredicted RBP14.01□□□□□ -0.17
SNRPF-203ENST00000551316 EFEMP1Q12805 493 aa14.01□□□□□ -0.17
SNRPF-203ENST00000551316 DEFB133Q30KQ1 61 aa14.01□□□□□ -0.17
SNRPF-203ENST00000551316 HNRNPA1L2Q32P51 320 aaKnown RBP14.01□□□□□ -0.17
SNRPF-203ENST00000551316 KLHDC10Q6PID8 442 aa14.01□□□□□ -0.17
SNRPF-203ENST00000551316 TMPRSS9Q7Z410 1059 aa14.01□□□□□ -0.17
SNRPF-203ENST00000551316 WFIKKN2Q8TEU8 576 aa14.01□□□□□ -0.17
SNRPF-203ENST00000551316 FAM131CQ96AQ9 280 aa14.01□□□□□ -0.17
SNRPF-203ENST00000551316 KLHDC7BQ96G42 594 aa14.01□□□□□ -0.17
SNRPF-203ENST00000551316 PPP1R13BQ96KQ4 1090 aa14.01□□□□□ -0.17
SNRPF-203ENST00000551316 CALN1Q9BXU9 219 aa14.01□□□□□ -0.17
SNRPF-203ENST00000551316 SDCBP2Q9H190 292 aa14.01□□□□□ -0.17
SNRPF-203ENST00000551316 PCIF1Q9H4Z3 704 aa14.01□□□□□ -0.17
SNRPF-203ENST00000551316 PREBQ9HCU5 417 aa14.01□□□□□ -0.17
SNRPF-203ENST00000551316 BLOC1S4Q9NUP1 217 aa14.01□□□□□ -0.17
SNRPF-203ENST00000551316 KLF15Q9UIH9 416 aa14.01□□□□□ -0.17
SNRPF-203ENST00000551316 INTS6Q9UL03 887 aaKnown RBP14.01□□□□□ -0.17
SNRPF-203ENST00000551316 SCML2Q9UQR0 700 aa14.01□□□□□ -0.17
SNRPF-203ENST00000551316 C9orf172C9J069 976 aa14□□□□□ -0.17
SNRPF-203ENST00000551316 NTN3O00634 580 aaPredicted RBP14□□□□□ -0.17
SNRPF-203ENST00000551316 ALPPL2P10696 532 aa14□□□□□ -0.17
SNRPF-203ENST00000551316 GOT1P17174 413 aa14□□□□□ -0.17
SNRPF-203ENST00000551316 HARS2P49590 506 aaKnown RBP14□□□□□ -0.17
SNRPF-203ENST00000551316 NUMBP49757 651 aa14□□□□□ -0.17
SNRPF-203ENST00000551316 CASP5P51878 434 aa14□□□□□ -0.17
SNRPF-203ENST00000551316 CLDN2P57739 230 aa14□□□□□ -0.17
SNRPF-203ENST00000551316 TPRG1LQ5T0D9 272 aa14□□□□□ -0.17
SNRPF-203ENST00000551316 OR6B2Q6IFH4 312 aa14□□□□□ -0.17
SNRPF-203ENST00000551316 ZCCHC8Q6NZY4 707 aaKnown RBP14□□□□□ -0.17
SNRPF-203ENST00000551316 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14□□□□□ -0.17
SNRPF-203ENST00000551316 GCNT7Q6ZNI0 430 aa14□□□□□ -0.17
SNRPF-203ENST00000551316 SND1Q7KZF4 910 aaKnown RBP eCLIP14□□□□□ -0.172e-9■□□□□ 10.4
SNRPF-203ENST00000551316 SFR1Q86XK3 245 aa14□□□□□ -0.17
SNRPF-203ENST00000551316 SLC35F3Q8IY50 421 aa14□□□□□ -0.17
SNRPF-203ENST00000551316 AHI1Q8N157 1196 aa14□□□□□ -0.17
SNRPF-203ENST00000551316 STK40Q8N2I9 435 aa14□□□□□ -0.17
SNRPF-203ENST00000551316 PMEPA1Q969W9 287 aa14□□□□□ -0.17
SNRPF-203ENST00000551316 LMLNQ96KR4 655 aa14□□□□□ -0.17
SNRPF-203ENST00000551316 CCDC3Q9BQI4 270 aa14□□□□□ -0.17
SNRPF-203ENST00000551316 STRA6Q9BX79 667 aa14□□□□□ -0.17
SNRPF-203ENST00000551316 USP29Q9HBJ7 922 aa14□□□□□ -0.17
SNRPF-203ENST00000551316 CSNK1G1Q9HCP0 422 aa14□□□□□ -0.17
SNRPF-203ENST00000551316 COMMD8Q9NX08 183 aa14□□□□□ -0.17
SNRPF-203ENST00000551316 PCSK5Q92824 1860 aa13.99□□□□□ -0.17
SNRPF-203ENST00000551316 CYBBP04839 570 aa13.99□□□□□ -0.17
SNRPF-203ENST00000551316 ARSDP51689 593 aa13.99□□□□□ -0.17
SNRPF-203ENST00000551316 OVGP1Q12889 678 aa13.99□□□□□ -0.17
SNRPF-203ENST00000551316 MCM6Q14566 821 aa13.99□□□□□ -0.17
SNRPF-203ENST00000551316 STAT4Q14765 748 aa13.99□□□□□ -0.17
SNRPF-203ENST00000551316 ME3Q16798 604 aa13.99□□□□□ -0.17
SNRPF-203ENST00000551316 ZSCAN1Q8NBB4 408 aa13.99□□□□□ -0.17
SNRPF-203ENST00000551316 SLC2A14Q8TDB8 520 aa13.99□□□□□ -0.17
SNRPF-203ENST00000551316 ABHD17AQ96GS6 310 aa13.99□□□□□ -0.17
SNRPF-203ENST00000551316 TCTN2Q96GX1 697 aa13.99□□□□□ -0.17
SNRPF-203ENST00000551316 ANKRD36BP1Q96IX9 119 aa13.99□□□□□ -0.17
SNRPF-203ENST00000551316 ST6GALNAC4Q9H4F1 302 aa13.99□□□□□ -0.17
SNRPF-203ENST00000551316 FAM49BQ9NUQ9 324 aa13.99□□□□□ -0.17
SNRPF-203ENST00000551316 NAGPAQ9UK23 515 aa13.99□□□□□ -0.17
SNRPF-203ENST00000551316 LRP4O75096 1905 aa13.99□□□□□ -0.17
SNRPF-203ENST00000551316 UNC13CQ8NB66 2214 aa13.99□□□□□ -0.17
SNRPF-203ENST00000551316 PRR19A6NJB7 356 aa13.98□□□□□ -0.17
SNRPF-203ENST00000551316 NVLO15381 856 aaKnown RBP13.98□□□□□ -0.17
SNRPF-203ENST00000551316 PLRG1O43660 514 aaKnown RBP13.98□□□□□ -0.17
SNRPF-203ENST00000551316 DUX1O43812 170 aa13.98□□□□□ -0.17
SNRPF-203ENST00000551316 MZF1P28698 734 aaPredicted RBP13.98□□□□□ -0.17
SNRPF-203ENST00000551316 PDE4CQ08493 712 aa13.98□□□□□ -0.17
SNRPF-203ENST00000551316 SFSWAPQ12872 951 aaKnown RBP13.98□□□□□ -0.17
SNRPF-203ENST00000551316 SPIDRQ14159 915 aa13.98□□□□□ -0.17
SNRPF-203ENST00000551316 E2F5Q15329 346 aa13.98□□□□□ -0.17
SNRPF-203ENST00000551316 AGBL4Q5VU57 503 aa13.98□□□□□ -0.17
SNRPF-203ENST00000551316 SCARA5Q6ZMJ2 495 aa13.98□□□□□ -0.17
SNRPF-203ENST00000551316 CLEC20AQ6ZU45 233 aa13.98□□□□□ -0.17
SNRPF-203ENST00000551316 ACOT1Q86TX2 421 aa13.98□□□□□ -0.17
SNRPF-203ENST00000551316 PRPF39Q86UA1 669 aaKnown RBP13.98□□□□□ -0.17
SNRPF-203ENST00000551316 TRIM69Q86WT6 500 aa13.98□□□□□ -0.17
SNRPF-203ENST00000551316 CBWD2Q8IUF1 395 aa13.98□□□□□ -0.17
SNRPF-203ENST00000551316 PDCD6IPQ8WUM4 868 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms