RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 PHTF2Q8N3S3 785 aa13.91□□□□□ -0.18
ERBB3-215ENST00000550828 PQLC3Q8N755 202 aa13.91□□□□□ -0.18
ERBB3-215ENST00000550828 PCDH19Q8TAB3 1148 aa13.91□□□□□ -0.18
ERBB3-215ENST00000550828 TMA16Q96EY4 203 aaKnown RBP13.91□□□□□ -0.18
ERBB3-215ENST00000550828 EPAS1Q99814 870 aa13.91□□□□□ -0.18
ERBB3-215ENST00000550828 DDX50Q9BQ39 737 aaKnown RBP13.91□□□□□ -0.18
ERBB3-215ENST00000550828 ARHGEF4Q9NR80 690 aa13.91□□□□□ -0.18
ERBB3-215ENST00000550828 SLC2A4RGQ9NR83 387 aa13.91□□□□□ -0.18
ERBB3-215ENST00000550828 PPARGC1AQ9UBK2 798 aaKnown RBP13.91□□□□□ -0.18
ERBB3-215ENST00000550828 MIF4GDA9UHW6 222 aaKnown RBP13.9□□□□□ -0.18
ERBB3-215ENST00000550828 H3BRJ5 948 aa13.9□□□□□ -0.18
ERBB3-215ENST00000550828 CACNG3O60359 315 aa13.9□□□□□ -0.18
ERBB3-215ENST00000550828 ADH1CP00326 375 aa13.9□□□□□ -0.18
ERBB3-215ENST00000550828 EPHB2P29323 1055 aa13.9□□□□□ -0.18
ERBB3-215ENST00000550828 GJA4P35212 333 aa13.9□□□□□ -0.18
ERBB3-215ENST00000550828 SLC6A11P48066 632 aa13.9□□□□□ -0.18
ERBB3-215ENST00000550828 GNG11P61952 73 aa13.9□□□□□ -0.18
ERBB3-215ENST00000550828 KRT81Q14533 505 aa13.9□□□□□ -0.18
ERBB3-215ENST00000550828 ANO4Q32M45 955 aa13.9□□□□□ -0.18
ERBB3-215ENST00000550828 ITPRIPL2Q3MIP1 535 aa13.9□□□□□ -0.18
ERBB3-215ENST00000550828 MPPE1Q53F39 396 aa13.9□□□□□ -0.18
ERBB3-215ENST00000550828 TXNDC11Q6PKC3 985 aa13.9□□□□□ -0.18
ERBB3-215ENST00000550828 SPOCD1Q6ZMY3 1216 aa13.9□□□□□ -0.18
ERBB3-215ENST00000550828 ZSCAN30Q86W11 494 aa13.9□□□□□ -0.18
ERBB3-215ENST00000550828 CPA6Q8N4T0 437 aa13.9□□□□□ -0.18
ERBB3-215ENST00000550828 NPWQ8N729 165 aa13.9□□□□□ -0.18
ERBB3-215ENST00000550828 NAT16Q8N8M0 369 aa13.9□□□□□ -0.18
ERBB3-215ENST00000550828 NETO2Q8NC67 525 aa13.9□□□□□ -0.18
ERBB3-215ENST00000550828 KCTD6Q8NC69 237 aa13.9□□□□□ -0.18
ERBB3-215ENST00000550828 EXD1Q8NHP7 514 aa13.9□□□□□ -0.18
ERBB3-215ENST00000550828 DDI1Q8WTU0 396 aa13.9□□□□□ -0.18
ERBB3-215ENST00000550828 PSMB7Q99436 277 aa13.9□□□□□ -0.18
ERBB3-215ENST00000550828 PRRX2Q99811 253 aa13.9□□□□□ -0.18
ERBB3-215ENST00000550828 ZNF670Q9BS34 389 aa13.9□□□□□ -0.18
ERBB3-215ENST00000550828 CALN1Q9BXU9 219 aa13.9□□□□□ -0.18
ERBB3-215ENST00000550828 ZYG11BQ9C0D3 744 aa13.9□□□□□ -0.18
ERBB3-215ENST00000550828 TRPV5Q9NQA5 729 aa13.9□□□□□ -0.18
ERBB3-215ENST00000550828 HEBP1Q9NRV9 189 aa13.9□□□□□ -0.18
ERBB3-215ENST00000550828 DDX56Q9NY93 547 aaKnown RBP13.9□□□□□ -0.18
ERBB3-215ENST00000550828 MUTYHQ9UIF7 546 aa13.9□□□□□ -0.18
ERBB3-215ENST00000550828 FBXO10Q9UK96 956 aa13.9□□□□□ -0.18
ERBB3-215ENST00000550828 hCG_1818297A0A087WSY0 165 aa13.89□□□□□ -0.19
ERBB3-215ENST00000550828 A0A1B0GVM2 712 aa13.89□□□□□ -0.19
ERBB3-215ENST00000550828 ANTXRLA6NF34 631 aa13.89□□□□□ -0.19
ERBB3-215ENST00000550828 TCAF2A6NFQ2 919 aa13.89□□□□□ -0.19
ERBB3-215ENST00000550828 WASH4PA8MWX3 477 aa13.89□□□□□ -0.19
ERBB3-215ENST00000550828 LUC7L3O95232 432 aaKnown RBP13.89□□□□□ -0.19
ERBB3-215ENST00000550828 CISD3P0C7P0 127 aa13.89□□□□□ -0.19
ERBB3-215ENST00000550828 KRT10P13645 584 aa13.89□□□□□ -0.19
ERBB3-215ENST00000550828 RHOQP17081 205 aa13.89□□□□□ -0.19
ERBB3-215ENST00000550828 ERCC2P18074 760 aa13.89□□□□□ -0.19
ERBB3-215ENST00000550828 HCAR3P49019 387 aa13.89□□□□□ -0.19
ERBB3-215ENST00000550828 NUMBP49757 651 aa13.89□□□□□ -0.19
ERBB3-215ENST00000550828 RWDD2BP57060 319 aa13.89□□□□□ -0.19
ERBB3-215ENST00000550828 PDK2Q15119 407 aa13.89□□□□□ -0.19
ERBB3-215ENST00000550828 RPS6KA1Q15418 735 aa13.89□□□□□ -0.19
ERBB3-215ENST00000550828 ANKRD20A8PQ5CZ79 823 aa13.89□□□□□ -0.19
ERBB3-215ENST00000550828 RABGAP1LQ5R372 815 aa13.89□□□□□ -0.19
ERBB3-215ENST00000550828 MPP7Q5T2T1 576 aa13.89□□□□□ -0.19
ERBB3-215ENST00000550828 ACBD5Q5T8D3 534 aaPredicted RBP13.89□□□□□ -0.19
ERBB3-215ENST00000550828 RWDD4Q6NW29 188 aaKnown RBP13.89□□□□□ -0.19
ERBB3-215ENST00000550828 CHST9Q7L1S5 443 aa13.89□□□□□ -0.19
ERBB3-215ENST00000550828 ARHGAP12Q8IWW6 846 aa13.89□□□□□ -0.19
ERBB3-215ENST00000550828 RTL3Q8N8U3 475 aaKnown RBP13.89□□□□□ -0.19
ERBB3-215ENST00000550828 DNASE1L2Q92874 299 aa13.89□□□□□ -0.19
ERBB3-215ENST00000550828 RNF157Q96PX1 679 aa13.89□□□□□ -0.19
ERBB3-215ENST00000550828 FBRSL1Q9HCM7 1045 aaKnown RBP13.89□□□□□ -0.19
ERBB3-215ENST00000550828 TMEM248Q9NWD8 314 aa13.89□□□□□ -0.19
ERBB3-215ENST00000550828 RCOR3Q9P2K3 495 aaPredicted RBP13.89□□□□□ -0.19
ERBB3-215ENST00000550828 SORCS3Q9UPU3 1222 aa13.89□□□□□ -0.19
ERBB3-215ENST00000550828 JRKLQ9Y4A0 524 aa13.89□□□□□ -0.19
ERBB3-215ENST00000550828 TCRBV7S2A1N4TA0A589 114 aa13.88□□□□□ -0.19
ERBB3-215ENST00000550828 ZNF487B1APH4 448 aa13.88□□□□□ -0.19
ERBB3-215ENST00000550828 TULP3O75386 442 aa13.88□□□□□ -0.19
ERBB3-215ENST00000550828 ZRANB2O95218 330 aaKnown RBP eCLIP13.88□□□□□ -0.19
ERBB3-215ENST00000550828 CHRM1P11229 460 aaPredicted RBP13.88□□□□□ -0.19
ERBB3-215ENST00000550828 MZF1P28698 734 aaPredicted RBP13.88□□□□□ -0.19
ERBB3-215ENST00000550828 HLA-FP30511 346 aa13.88□□□□□ -0.19
ERBB3-215ENST00000550828 CXCR5P32302 372 aa13.88□□□□□ -0.19
ERBB3-215ENST00000550828 CTHP32929 405 aa13.88□□□□□ -0.19
ERBB3-215ENST00000550828 CD70P32970 193 aa13.88□□□□□ -0.19
ERBB3-215ENST00000550828 HTR7P34969 479 aa13.88□□□□□ -0.19
ERBB3-215ENST00000550828 ARL4AP40617 200 aa13.88□□□□□ -0.19
ERBB3-215ENST00000550828 CDH4P55283 916 aa13.88□□□□□ -0.19
ERBB3-215ENST00000550828 ETF1P62495 437 aaKnown RBP13.88□□□□□ -0.19
ERBB3-215ENST00000550828 GAD2Q05329 585 aa13.88□□□□□ -0.19
ERBB3-215ENST00000550828 LMAN2Q12907 356 aa13.88□□□□□ -0.19
ERBB3-215ENST00000550828 ZFYVE27Q5T4F4 411 aa13.88□□□□□ -0.19
ERBB3-215ENST00000550828 TTC39BQ5VTQ0 682 aaPredicted RBP13.88□□□□□ -0.19
ERBB3-215ENST00000550828 AFMIDQ63HM1 303 aa13.88□□□□□ -0.19
ERBB3-215ENST00000550828 NCBP2-AS2Q69YL0 99 aa13.88□□□□□ -0.19
ERBB3-215ENST00000550828 LRRC31Q6UY01 552 aa13.88□□□□□ -0.19
ERBB3-215ENST00000550828 VSIG1Q86XK7 387 aa13.88□□□□□ -0.19
ERBB3-215ENST00000550828 RCOR2Q8IZ40 523 aa13.88□□□□□ -0.19
ERBB3-215ENST00000550828 CARNMT1Q8N4J0 409 aa13.88□□□□□ -0.19
ERBB3-215ENST00000550828 PLD5Q8N7P1 536 aa13.88□□□□□ -0.19
ERBB3-215ENST00000550828 EZH1Q92800 747 aaPredicted RBP13.88□□□□□ -0.19
ERBB3-215ENST00000550828 ALG14Q96F25 216 aa13.88□□□□□ -0.19
ERBB3-215ENST00000550828 C16orf45Q96MC5 204 aaPredicted RBP13.88□□□□□ -0.19
ERBB3-215ENST00000550828 INTS6Q9UL03 887 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms