RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 C14orf80Q86SX3 495 aa26.74■■□□□ 1.87
CPSF6-205ENST00000550075 C11orf74Q86VG3 221 aa26.74■■□□□ 1.87
CPSF6-205ENST00000550075 SORCS1Q8WY21 1168 aa26.74■■□□□ 1.87
CPSF6-205ENST00000550075 TPSD1Q9BZJ3 242 aa26.74■■□□□ 1.87
CPSF6-205ENST00000550075 RBSNQ9H1K0 784 aa26.74■■□□□ 1.87
CPSF6-205ENST00000550075 DEF6Q9H4E7 631 aa26.74■■□□□ 1.87
CPSF6-205ENST00000550075 ARHGAP20Q9P2F6 1191 aa26.74■■□□□ 1.87
CPSF6-205ENST00000550075 MUC22E2RYF6 1773 aaPredicted RBP26.74■■□□□ 1.87
CPSF6-205ENST00000550075 A0A1W2PQF6 199 aa26.73■■□□□ 1.87
CPSF6-205ENST00000550075 E9PAM4 449 aa26.73■■□□□ 1.87
CPSF6-205ENST00000550075 I6L893 689 aaPredicted RBP26.73■■□□□ 1.87
CPSF6-205ENST00000550075 CSKP41240 450 aa26.73■■□□□ 1.87
CPSF6-205ENST00000550075 BYSLQ13895 437 aaKnown RBP26.73■■□□□ 1.87
CPSF6-205ENST00000550075 ARID5BQ14865 1188 aa26.73■■□□□ 1.87
CPSF6-205ENST00000550075 PLEKHG6Q3KR16 790 aa26.73■■□□□ 1.87
CPSF6-205ENST00000550075 FSCBQ5H9T9 825 aa26.73■■□□□ 1.87
CPSF6-205ENST00000550075 RNF219Q5W0B1 726 aaPredicted RBP26.73■■□□□ 1.87
CPSF6-205ENST00000550075 ALYREFQ86V81 257 aaKnown RBP26.73■■□□□ 1.87
CPSF6-205ENST00000550075 CYB5D2Q8WUJ1 264 aa26.73■■□□□ 1.87
CPSF6-205ENST00000550075 TTC17Q96AE7 1141 aa26.73■■□□□ 1.87
CPSF6-205ENST00000550075 SPACA7Q96KW9 195 aa26.73■■□□□ 1.87
CPSF6-205ENST00000550075 TMPRSS4Q9NRS4 437 aa26.73■■□□□ 1.87
CPSF6-205ENST00000550075 ABHD10Q9NUJ1 306 aa26.73■■□□□ 1.87
CPSF6-205ENST00000550075 EML5Q05BV3 1969 aa26.73■■□□□ 1.87
CPSF6-205ENST00000550075 IGLV3-10A0A075B6K4 115 aa26.72■■□□□ 1.87
CPSF6-205ENST00000550075 HRO43593 1189 aa26.72■■□□□ 1.87
CPSF6-205ENST00000550075 EPHX1P07099 455 aa26.72■■□□□ 1.87
CPSF6-205ENST00000550075 PSMA2P25787 234 aa26.72■■□□□ 1.87
CPSF6-205ENST00000550075 AIF1P55008 147 aa26.72■■□□□ 1.87
CPSF6-205ENST00000550075 SULT2A1Q06520 285 aa26.72■■□□□ 1.87
CPSF6-205ENST00000550075 EFHC2Q5JST6 749 aa26.72■■□□□ 1.87
CPSF6-205ENST00000550075 SCYL2Q6P3W7 929 aa26.72■■□□□ 1.87
CPSF6-205ENST00000550075 ALKBH5Q6P6C2 394 aaKnown RBP26.72■■□□□ 1.87
CPSF6-205ENST00000550075 ASCL5Q7RTU5 278 aa26.72■■□□□ 1.87
CPSF6-205ENST00000550075 SUMF1Q8NBK3 374 aa26.72■■□□□ 1.87
CPSF6-205ENST00000550075 FNIP1Q8TF40 1166 aa26.72■■□□□ 1.87
CPSF6-205ENST00000550075 OSBPL2Q9H1P3 480 aa26.72■■□□□ 1.87
CPSF6-205ENST00000550075 MYO1AQ9UBC5 1043 aa26.72■■□□□ 1.87
CPSF6-205ENST00000550075 SNX10Q9Y5X0 201 aa26.72■■□□□ 1.87
CPSF6-205ENST00000550075 RAD54BQ9Y620 910 aa26.72■■□□□ 1.87
CPSF6-205ENST00000550075 CKAP5Q14008 2032 aa26.72■■□□□ 1.87
CPSF6-205ENST00000550075 VPS13AQ96RL7 3174 aa26.71■■□□□ 1.87
CPSF6-205ENST00000550075 A0A087X0T9 212 aa26.71■■□□□ 1.87
CPSF6-205ENST00000550075 DRGXA6NNA5 263 aa26.71■■□□□ 1.87
CPSF6-205ENST00000550075 WASH3PC4AMC7 463 aa26.71■■□□□ 1.87
CPSF6-205ENST00000550075 FAM228BP0C875 321 aa26.71■■□□□ 1.87
CPSF6-205ENST00000550075 EIF4A3P38919 411 aaKnown RBP26.71■■□□□ 1.87
CPSF6-205ENST00000550075 NRG1Q02297 640 aaPredicted RBP26.71■■□□□ 1.87
CPSF6-205ENST00000550075 SCAPQ12770 1279 aa26.71■■□□□ 1.87
CPSF6-205ENST00000550075 SRSF5Q13243 272 aaKnown RBP26.71■■□□□ 1.87
CPSF6-205ENST00000550075 CCDC122Q5T0U0 273 aa26.71■■□□□ 1.87
CPSF6-205ENST00000550075 CXorf57Q6NSI4 855 aaKnown RBP26.71■■□□□ 1.87
CPSF6-205ENST00000550075 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.71■■□□□ 1.87
CPSF6-205ENST00000550075 SLFN11Q7Z7L1 901 aa26.71■■□□□ 1.87
CPSF6-205ENST00000550075 DNAAF5Q86Y56 855 aa26.71■■□□□ 1.87
CPSF6-205ENST00000550075 ZNF683Q8IZ20 524 aa26.71■■□□□ 1.87
CPSF6-205ENST00000550075 NCAPGQ9BPX3 1015 aa26.71■■□□□ 1.87
CPSF6-205ENST00000550075 ZYG11BQ9C0D3 744 aa26.71■■□□□ 1.87
CPSF6-205ENST00000550075 FBRSQ9HAH7 460 aa26.71■■□□□ 1.87
CPSF6-205ENST00000550075 OR12D3Q9UGF7 316 aa26.71■■□□□ 1.87
CPSF6-205ENST00000550075 INTS6Q9UL03 887 aaKnown RBP26.71■■□□□ 1.87
CPSF6-205ENST00000550075 SPAG17Q6Q759 2223 aa26.71■■□□□ 1.87
CPSF6-205ENST00000550075 SSU72P8A0A1W2PR75 194 aa26.7■■□□□ 1.86
CPSF6-205ENST00000550075 TMEM191CA6NGB0 347 aa26.7■■□□□ 1.86
CPSF6-205ENST00000550075 AKR1B15C9JRZ8 316 aaPredicted RBP26.7■■□□□ 1.86
CPSF6-205ENST00000550075 SRGAP2O75044 1071 aa26.7■■□□□ 1.86
CPSF6-205ENST00000550075 RNF8O76064 485 aa26.7■■□□□ 1.86
CPSF6-205ENST00000550075 RHOCP08134 193 aa26.7■■□□□ 1.86
CPSF6-205ENST00000550075 SRPRAP08240 638 aaKnown RBP26.7■■□□□ 1.86
CPSF6-205ENST00000550075 GABRG2P18507 467 aa26.7■■□□□ 1.86
CPSF6-205ENST00000550075 PRKCHP24723 683 aa26.7■■□□□ 1.86
CPSF6-205ENST00000550075 IRAK1P51617 712 aa26.7■■□□□ 1.86
CPSF6-205ENST00000550075 RAB6CQ53S08 254 aa26.7■■□□□ 1.86
CPSF6-205ENST00000550075 C6orf118Q5T5N4 469 aa26.7■■□□□ 1.86
CPSF6-205ENST00000550075 LAIR1Q6GTX8 287 aa26.7■■□□□ 1.86
CPSF6-205ENST00000550075 KIAA1211LQ6NV74 962 aa26.7■■□□□ 1.86
CPSF6-205ENST00000550075 SETD3Q86TU7 594 aaPredicted RBP26.7■■□□□ 1.86
CPSF6-205ENST00000550075 CCDC185Q8N715 623 aa26.7■■□□□ 1.86
CPSF6-205ENST00000550075 KDM1BQ8NB78 822 aa26.7■■□□□ 1.86
CPSF6-205ENST00000550075 RAB6CQ9H0N0 254 aa26.7■■□□□ 1.86
CPSF6-205ENST00000550075 NCDNQ9UBB6 729 aa26.7■■□□□ 1.86
CPSF6-205ENST00000550075 PPARGC1AQ9UBK2 798 aaKnown RBP26.7■■□□□ 1.86
CPSF6-205ENST00000550075 GMEB2Q9UKD1 530 aa26.7■■□□□ 1.86
CPSF6-205ENST00000550075 TBC1D30Q9Y2I9 924 aa26.7■■□□□ 1.86
CPSF6-205ENST00000550075 DOCK4Q8N1I0 1966 aa26.69■■□□□ 1.86
CPSF6-205ENST00000550075 NNMTP40261 264 aa26.69■■□□□ 1.86
CPSF6-205ENST00000550075 PLK1P53350 603 aa26.69■■□□□ 1.86
CPSF6-205ENST00000550075 ECT2LQ008S8 904 aa26.69■■□□□ 1.86
CPSF6-205ENST00000550075 MAPK8IP2Q13387 824 aaPredicted RBP26.69■■□□□ 1.86
CPSF6-205ENST00000550075 ELF2Q15723 593 aa26.69■■□□□ 1.86
CPSF6-205ENST00000550075 PTPRNQ16849 979 aa26.69■■□□□ 1.86
CPSF6-205ENST00000550075 RUBCNQ92622 972 aa26.69■■□□□ 1.86
CPSF6-205ENST00000550075 HINFPQ9BQA5 517 aa26.69■■□□□ 1.86
CPSF6-205ENST00000550075 MUC3BQ9H195 1237 aa26.69■■□□□ 1.86
CPSF6-205ENST00000550075 TMEM245Q9H330 911 aa26.69■■□□□ 1.86
CPSF6-205ENST00000550075 RETREG1Q9H6L5 497 aa26.69■■□□□ 1.86
CPSF6-205ENST00000550075 CD248Q9HCU0 757 aa26.69■■□□□ 1.86
CPSF6-205ENST00000550075 SUN2Q9UH99 717 aa26.69■■□□□ 1.86
CPSF6-205ENST00000550075 RIF1Q5UIP0 2472 aaKnown RBP26.68■■□□□ 1.86
CPSF6-205ENST00000550075 AP5Z1O43299 807 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms