RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 CAVIN2O95810 425 aa10.09□□□□□ -0.79
HDAC7-229ENST00000549883 DLDP09622 509 aaKnown RBP10.09□□□□□ -0.79
HDAC7-229ENST00000549883 SLC2A3P11169 496 aa10.09□□□□□ -0.79
HDAC7-229ENST00000549883 SKILP12757 684 aa10.09□□□□□ -0.79
HDAC7-229ENST00000549883 VAV1P15498 845 aa10.09□□□□□ -0.79
HDAC7-229ENST00000549883 ITPKAP23677 461 aa10.09□□□□□ -0.79
HDAC7-229ENST00000549883 RFC1P35251 1148 aaPredicted RBP10.09□□□□□ -0.79
HDAC7-229ENST00000549883 TPMTP51580 245 aa10.09□□□□□ -0.79
HDAC7-229ENST00000549883 FANCCQ00597 558 aa10.09□□□□□ -0.79
HDAC7-229ENST00000549883 RPL6Q02878 288 aaKnown RBP10.09□□□□□ -0.79
HDAC7-229ENST00000549883 STARD3Q14849 445 aa10.09□□□□□ -0.79
HDAC7-229ENST00000549883 CDO1Q16878 200 aa10.09□□□□□ -0.79
HDAC7-229ENST00000549883 PLEKHG6Q3KR16 790 aa10.09□□□□□ -0.79
HDAC7-229ENST00000549883 TRIM72Q6ZMU5 477 aa10.09□□□□□ -0.79
HDAC7-229ENST00000549883 FAM124AQ86V42 546 aa10.09□□□□□ -0.79
HDAC7-229ENST00000549883 PHF13Q86YI8 300 aaPredicted RBP10.09□□□□□ -0.79
HDAC7-229ENST00000549883 PIGKQ92643 395 aa10.09□□□□□ -0.79
HDAC7-229ENST00000549883 PGAP3Q96FM1 320 aaPredicted RBP10.09□□□□□ -0.79
HDAC7-229ENST00000549883 SPACA7Q96KW9 195 aa10.09□□□□□ -0.79
HDAC7-229ENST00000549883 IRX2Q9BZI1 471 aaPredicted RBP10.09□□□□□ -0.79
HDAC7-229ENST00000549883 DLL3Q9NYJ7 618 aa10.09□□□□□ -0.79
HDAC7-229ENST00000549883 ADAM22Q9P0K1 906 aa10.09□□□□□ -0.79
HDAC7-229ENST00000549883 USP36Q9P275 1121 aaKnown RBP10.09□□□□□ -0.79
HDAC7-229ENST00000549883 SLC12A6Q9UHW9 1150 aa10.09□□□□□ -0.79
HDAC7-229ENST00000549883 STAP1Q9ULZ2 295 aa10.09□□□□□ -0.79
HDAC7-229ENST00000549883 ERVW-1Q9UQF0 538 aa10.09□□□□□ -0.79
HDAC7-229ENST00000549883 SPTBN2O15020 2390 aa10.09□□□□□ -0.79
HDAC7-229ENST00000549883 ASCC3Q8N3C0 2202 aaKnown RBP10.09□□□□□ -0.79
HDAC7-229ENST00000549883 CHD5Q8TDI0 1954 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 PCDH15Q96QU1 1955 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 A0A1B0GVM2 712 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 A0A1W2PQC6 194 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 DCDC2BA2VCK2 349 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 TCAF2A6NFQ2 919 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 TMCO5BA8MYB1 307 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 FAM72CH0Y354 149 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 ATMINO43313 823 aaPredicted RBP10.08□□□□□ -0.8
HDAC7-229ENST00000549883 LRP3O75074 770 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 SIN3BO75182 1162 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 ENDOD1O94919 500 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 SERPINC1P01008 464 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 FERP16591 822 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 MAOBP27338 520 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 PBX1P40424 430 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 NSFP46459 744 aaKnown RBP10.08□□□□□ -0.8
HDAC7-229ENST00000549883 RPS14P62263 151 aaKnown RBP10.08□□□□□ -0.8
HDAC7-229ENST00000549883 RPL7AP62424 266 aaKnown RBP10.08□□□□□ -0.8
HDAC7-229ENST00000549883 IRX4P78413 519 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 OGDHQ02218 1023 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 LMNB2Q03252 620 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 C5orf22Q49AR2 442 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 FAM72AQ5TYM5 149 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 FAM72DQ6L9T8 149 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 WDR59Q6PJI9 974 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 LPCAT2Q7L5N7 544 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 ZNF571Q7Z3V5 609 aaPredicted RBP10.08□□□□□ -0.8
HDAC7-229ENST00000549883 CYP2U1Q7Z449 544 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 TFAP2DQ7Z6R9 452 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 FAM72BQ86X60 149 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 OR2T3Q8NH03 318 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 SIPA1Q96FS4 1042 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 PSMB7Q99436 277 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 FEM1AQ9BSK4 669 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 ITM2CQ9NQX7 267 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 RRN3Q9NYV6 651 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 KIAA1522Q9P206 1035 aaPredicted RBP10.08□□□□□ -0.8
HDAC7-229ENST00000549883 PLA2G4CQ9UP65 541 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 DAAM1Q9Y4D1 1078 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 PCDHGA5Q9Y5G8 931 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 OR51B4Q9Y5P0 310 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 SLCO1B1Q9Y6L6 691 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 LAMA1P25391 3075 aa10.08□□□□□ -0.8
HDAC7-229ENST00000549883 PLXNA2O75051 1894 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 A0A0D9SEW6 157 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 LNP1A1A4G5 178 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 TYW5A2RUC4 315 aaKnown RBP10.07□□□□□ -0.8
HDAC7-229ENST00000549883 DRGXA6NNA5 263 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 RNF103O00237 685 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 DDX3XO00571 662 aaKnown RBP eCLIP10.07□□□□□ -0.8
HDAC7-229ENST00000549883 NPC1O15118 1278 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 SNAP91O60641 907 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 SRGAP2O75044 1071 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 ATP5BP06576 529 aaKnown RBP10.07□□□□□ -0.8
HDAC7-229ENST00000549883 KRT3P12035 628 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 GLDCP23378 1020 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 RRM1P23921 792 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 CD6P30203 668 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 RDXP35241 583 aaKnown RBP10.07□□□□□ -0.8
HDAC7-229ENST00000549883 METAP1P53582 386 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 HDAC4P56524 1084 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 ECT2LQ008S8 904 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 ZNF33AQ06730 810 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 ASIC2Q16515 512 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 HNRNPA1L2Q32P51 320 aaKnown RBP10.07□□□□□ -0.8
HDAC7-229ENST00000549883 FILIP1LQ4L180 1135 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 AASDHQ4L235 1098 aaPredicted RBP10.07□□□□□ -0.8
HDAC7-229ENST00000549883 BRMS1LQ5PSV4 323 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 RABGAP1LQ5R372 815 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 PPP1R15BQ5SWA1 713 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 C9orf64Q5T6V5 341 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms