RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 ITM2AO43736 263 aa11.38□□□□□ -0.59
LINC00661-204ENST00000549354 CCND3P30281 292 aaPredicted RBP11.38□□□□□ -0.59
LINC00661-204ENST00000549354 ETV4P43268 484 aa11.38□□□□□ -0.59
LINC00661-204ENST00000549354 SOX4Q06945 474 aaPredicted RBP11.38□□□□□ -0.59
LINC00661-204ENST00000549354 PPP1R26Q5T8A7 1209 aaPredicted RBP11.38□□□□□ -0.59
LINC00661-204ENST00000549354 TRNP1Q6NT89 227 aa11.38□□□□□ -0.59
LINC00661-204ENST00000549354 PCGF5Q86SE9 256 aa11.38□□□□□ -0.59
LINC00661-204ENST00000549354 TMEM110Q86TL2 294 aa11.38□□□□□ -0.59
LINC00661-204ENST00000549354 RNF135Q8IUD6 432 aa11.38□□□□□ -0.59
LINC00661-204ENST00000549354 DNAAF3Q8N9W5 541 aa11.38□□□□□ -0.59
LINC00661-204ENST00000549354 ARHGEF4Q9NR80 690 aa11.38□□□□□ -0.59
LINC00661-204ENST00000549354 NDE1Q9NXR1 346 aa11.38□□□□□ -0.59
LINC00661-204ENST00000549354 TXNDC16Q9P2K2 825 aa11.38□□□□□ -0.59
LINC00661-204ENST00000549354 ST3GAL5Q9UNP4 418 aa11.38□□□□□ -0.59
LINC00661-204ENST00000549354 SNX10Q9Y5X0 201 aa11.38□□□□□ -0.59
LINC00661-204ENST00000549354 KPNA7A9QM74 516 aa11.38□□□□□ -0.59
LINC00661-204ENST00000549354 LMNAP02545 664 aaKnown RBP11.38□□□□□ -0.59
LINC00661-204ENST00000549354 ASGR1P07306 291 aa11.38□□□□□ -0.59
LINC00661-204ENST00000549354 ANPEPP15144 967 aa11.38□□□□□ -0.59
LINC00661-204ENST00000549354 KCNA10Q16322 511 aa11.38□□□□□ -0.59
LINC00661-204ENST00000549354 IRGCQ6NXR0 463 aa11.38□□□□□ -0.59
LINC00661-204ENST00000549354 DRICH1Q6PGQ1 229 aaPredicted RBP11.38□□□□□ -0.59
LINC00661-204ENST00000549354 STKLD1Q8NE28 680 aa11.38□□□□□ -0.59
LINC00661-204ENST00000549354 SLC35F5Q8WV83 523 aa11.38□□□□□ -0.59
LINC00661-204ENST00000549354 SLC44A1Q8WWI5 657 aa11.38□□□□□ -0.59
LINC00661-204ENST00000549354 PHACTR1Q9C0D0 580 aa11.38□□□□□ -0.59
LINC00661-204ENST00000549354 EBF3Q9H4W6 596 aa11.38□□□□□ -0.59
LINC00661-204ENST00000549354 SLC4A7Q9Y6M7 1214 aa11.38□□□□□ -0.59
LINC00661-204ENST00000549354 ARSAP15289 507 aa11.38□□□□□ -0.59
LINC00661-204ENST00000549354 MRPS5P82675 430 aaKnown RBP11.38□□□□□ -0.59
LINC00661-204ENST00000549354 TRIM71Q2Q1W2 868 aaKnown RBP11.38□□□□□ -0.59
LINC00661-204ENST00000549354 C6orf163Q5TEZ5 329 aa11.38□□□□□ -0.59
LINC00661-204ENST00000549354 BBS12Q6ZW61 710 aa11.38□□□□□ -0.59
LINC00661-204ENST00000549354 CRLF3Q8IUI8 442 aa11.38□□□□□ -0.59
LINC00661-204ENST00000549354 TOP6BLQ8N6T0 577 aa11.38□□□□□ -0.59
LINC00661-204ENST00000549354 PNPOQ9NVS9 261 aa11.38□□□□□ -0.59
LINC00661-204ENST00000549354 STX18Q9P2W9 335 aaKnown RBP11.38□□□□□ -0.59
LINC00661-204ENST00000549354 SRRDQ9UH36 339 aa11.38□□□□□ -0.59
LINC00661-204ENST00000549354 PSAT1Q9Y617 370 aa11.38□□□□□ -0.59
LINC00661-204ENST00000549354 LIN7AO14910 233 aaPredicted RBP11.37□□□□□ -0.59
LINC00661-204ENST00000549354 AOC2O75106 756 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 CABYRO75952 493 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 KRT37O76014 449 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 TOMM70O94826 608 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 KRT7P08729 469 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 WARSP23381 471 aaKnown RBP11.37□□□□□ -0.59
LINC00661-204ENST00000549354 GNL1P36915 607 aaPredicted RBP11.37□□□□□ -0.59
LINC00661-204ENST00000549354 TAF6P49848 677 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 DSC3Q14574 896 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 GRAMD1BQ3KR37 738 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 SV2CQ496J9 727 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 RASSF3Q86WH2 238 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 PCSK9Q8NBP7 692 aaKnown RBP11.37□□□□□ -0.59
LINC00661-204ENST00000549354 DNAJC16Q9Y2G8 782 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 SQORQ9Y6N5 450 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 A8MXQ7 604 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 E7ENQ6 273 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 DPYSL4O14531 572 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 GPR182O15218 404 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 PAPSS1O43252 624 aaPredicted RBP11.37□□□□□ -0.59
LINC00661-204ENST00000549354 ZNF623O75123 536 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 PROCP04070 461 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 FESP07332 822 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 PRKAR2AP13861 404 aaKnown RBP11.37□□□□□ -0.59
LINC00661-204ENST00000549354 SDC4P31431 198 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 SCNN1AP37088 669 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 ASPHQ12797 758 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 ZRSR2Q15696 482 aaKnown RBP11.37□□□□□ -0.59
LINC00661-204ENST00000549354 DCAF6Q58WW2 860 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 ARCQ7LC44 396 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 ZBTB46Q86UZ6 589 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 SLC26A11Q86WA9 606 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 TTC30AQ86WT1 665 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 USP13Q92995 863 aaPredicted RBP11.37□□□□□ -0.59
LINC00661-204ENST00000549354 CAPNS2Q96L46 248 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 FAM105AQ9NUU6 356 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 AIM2O14862 343 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 TRPA1O75762 1119 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 PGM3O95394 542 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 GNRH1P01148 92 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 LYNP07948 512 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 SNRPAP09012 282 aaKnown RBP11.37□□□□□ -0.59
LINC00661-204ENST00000549354 GOT1P17174 413 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 GSTT1P30711 240 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 SERPINB5P36952 375 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 LILRA4P59901 499 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 YWHAZP63104 245 aaKnown RBP11.37□□□□□ -0.59
LINC00661-204ENST00000549354 TWF2Q6IBS0 349 aaKnown RBP11.37□□□□□ -0.59
LINC00661-204ENST00000549354 KCNT2Q6UVM3 1135 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 RPS27LQ71UM5 84 aaKnown RBP11.37□□□□□ -0.59
LINC00661-204ENST00000549354 ZDHHC17Q8IUH5 632 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 PXYLP1Q8TE99 480 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 SIK2Q9H0K1 926 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 TLE6Q9H808 572 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 SLC38A7Q9NVC3 462 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 TSR3Q9UJK0 312 aaKnown RBP11.37□□□□□ -0.59
LINC00661-204ENST00000549354 GIT1Q9Y2X7 761 aa11.37□□□□□ -0.59
LINC00661-204ENST00000549354 PEX1O43933 1283 aa11.36□□□□□ -0.59
LINC00661-204ENST00000549354 RNASEH1O60930 286 aaKnown RBP11.36□□□□□ -0.59
LINC00661-204ENST00000549354 GABBR2O75899 941 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms