RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 PIN1Q13526 163 aaPredicted RBP5.05□□□□□ -1.6
SCAF11-212ENST00000549162 DPYSL3Q14195 570 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 TIGD7Q6NT04 549 aaPredicted RBP5.05□□□□□ -1.6
SCAF11-212ENST00000549162 MARK2Q7KZI7 788 aaKnown RBP5.05□□□□□ -1.6
SCAF11-212ENST00000549162 NLRP9Q7RTR0 991 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 LRRC6Q86X45 466 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 SLC13A5Q86YT5 568 aaPredicted RBP5.05□□□□□ -1.6
SCAF11-212ENST00000549162 ADGRF2Q8IZF7 708 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 PHC3Q8NDX5 983 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 ZFPM2Q8WW38 1151 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 POP5Q969H6 163 aaKnown RBP5.05□□□□□ -1.6
SCAF11-212ENST00000549162 EXOC4Q96A65 974 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 ALS2CR12Q96Q35 445 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 NSMCE4AQ9NXX6 385 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 MOCS1Q9NZB8 636 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 SLC24A2Q9UI40 661 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 MEIS3P2A8K0S8 358 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 B4GALT5O43286 388 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 CLASP2O75122 1294 aaKnown RBP5.05□□□□□ -1.6
SCAF11-212ENST00000549162 LRCH4O75427 683 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 DDHD2O94830 711 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 SKILP12757 684 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 GPD1P21695 349 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 CDC25CP30307 473 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 GSTT1P30711 240 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 HDAC4P56524 1084 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 GEMIN4P57678 1058 aaKnown RBP5.05□□□□□ -1.6
SCAF11-212ENST00000549162 SNAP25P60880 206 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 FXNQ16595 210 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 TMEM52BQ4KMG9 183 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 SEZ6Q53EL9 994 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 TFDP3Q5H9I0 405 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 PERM1Q5SV97 790 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 ZBTB41Q5SVQ8 909 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 RNASEH2BQ5TBB1 312 aaKnown RBP5.05□□□□□ -1.6
SCAF11-212ENST00000549162 STRA8Q7Z7C7 330 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 CLEC14AQ86T13 490 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 METTL13Q8N6R0 699 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 PAF1Q8N7H5 531 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 MRPL43Q8N983 215 aaKnown RBP5.05□□□□□ -1.6
SCAF11-212ENST00000549162 SPPL3Q8TCT6 385 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 CASP10Q92851 521 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 CLDN23Q96B33 292 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 CLSTN3Q9BQT9 956 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 KIFC1Q9BW19 673 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 ADAM7Q9H2U9 754 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 SFXN1Q9H9B4 322 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 SETD4Q9NVD3 440 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 SPG21Q9NZD8 308 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 SHISA7A6NL88 538 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 MCF2LO15068 1137 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 TBX19O60806 448 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 OPHN1O60890 802 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 PYGLP06737 847 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 ZNF286BP0CG31 522 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 CCDC130P13994 396 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 KDELR1P24390 212 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 SLC18A2Q05940 514 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 DPTQ07507 201 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 DCAF6Q58WW2 860 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 IL23RQ5VWK5 629 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 DMRTA1Q5VZB9 504 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 FBXW10Q5XX13 1052 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 ZNF534Q76KX8 674 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 GPR149Q86SP6 731 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 THEM5Q8N1Q8 247 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 TMIEQ8NEW7 156 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 ATL2Q8NHH9 583 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 TMEM143Q96AN5 459 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 VAT1LQ9HCJ6 419 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 PRMT8Q9NR22 394 aaPredicted RBP5.05□□□□□ -1.6
SCAF11-212ENST00000549162 TREX1Q9NSU2 369 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 TAB2Q9NYJ8 693 aa5.05□□□□□ -1.6
SCAF11-212ENST00000549162 KDELR3O43731 214 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 B4GALT3O60512 393 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 SP100P23497 879 aaPredicted RBP5.04□□□□□ -1.6
SCAF11-212ENST00000549162 PIK3CAP42336 1068 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 PSMD8P48556 350 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 SLC11A1P49279 550 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 CDH4P55283 916 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 TRIM32Q13049 653 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 MRM1Q6IN84 353 aaKnown RBP5.04□□□□□ -1.6
SCAF11-212ENST00000549162 KDELC1Q6UW63 502 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 GLB1LQ6UWU2 654 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 LHFPL2Q6ZUX7 228 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 SLITRK4Q8IW52 837 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 NUP93Q8N1F7 819 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 FBXO27Q8NI29 283 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 FIBINQ8TAL6 211 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 RAET1EQ8TD07 263 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 DNAJB3Q8WWF6 145 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 NKD1Q969G9 470 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 RNF157Q96PX1 679 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 MTIF3Q9H2K0 278 aaKnown RBP5.04□□□□□ -1.6
SCAF11-212ENST00000549162 CCDC177Q9NQR7 707 aaPredicted RBP5.04□□□□□ -1.6
SCAF11-212ENST00000549162 SENP1Q9P0U3 644 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 ZNF232Q9UNY5 417 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 SENP3-EIF4A1A0A087X0R7 540 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 ERLIN2O94905 339 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 CXCL8P10145 99 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms