RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 SEPSECSQ9HD40 501 aaKnown RBP2.6□□□□□ -1.99
CEP290-204ENST00000547926 ZBTB40Q9NUA8 1239 aa2.6□□□□□ -1.99
CEP290-204ENST00000547926 DAPP1Q9UN19 280 aa2.6□□□□□ -1.99
CEP290-204ENST00000547926 CNTN6Q9UQ52 1028 aa2.6□□□□□ -1.99
CEP290-204ENST00000547926 LRCH1Q9Y2L9 728 aa2.6□□□□□ -1.99
CEP290-204ENST00000547926 SLC38A8A6NNN8 435 aa2.6□□□□□ -1.99
CEP290-204ENST00000547926 ZNF814B7Z6K7 855 aa2.6□□□□□ -1.99
CEP290-204ENST00000547926 CRYABP02511 175 aaKnown RBP2.6□□□□□ -1.99
CEP290-204ENST00000547926 WNT1P04628 370 aa2.6□□□□□ -1.99
CEP290-204ENST00000547926 IGFBP2P18065 325 aa2.6□□□□□ -1.99
CEP290-204ENST00000547926 ME1P48163 572 aa2.6□□□□□ -1.99
CEP290-204ENST00000547926 B4GALNT1Q00973 533 aa2.6□□□□□ -1.99
CEP290-204ENST00000547926 TNFAIP2Q03169 654 aa2.6□□□□□ -1.99
CEP290-204ENST00000547926 SF3A3Q12874 501 aaKnown RBP eCLIP2.6□□□□□ -1.99
CEP290-204ENST00000547926 PUM3Q15397 648 aaKnown RBP2.6□□□□□ -1.99
CEP290-204ENST00000547926 ODF3L2Q3SX64 289 aa2.6□□□□□ -1.99
CEP290-204ENST00000547926 GLE1Q53GS7 698 aaKnown RBP2.6□□□□□ -1.99
CEP290-204ENST00000547926 KIAA1755Q5JYT7 1200 aa2.6□□□□□ -1.99
CEP290-204ENST00000547926 C1orf228Q6PIY5 440 aa2.6□□□□□ -1.99
CEP290-204ENST00000547926 KIAA1324Q6UXG2 1013 aaKnown RBP2.6□□□□□ -1.99
CEP290-204ENST00000547926 ZNF329Q86UD4 541 aa2.6□□□□□ -1.99
CEP290-204ENST00000547926 ARFGAP1Q8N6T3 406 aa2.6□□□□□ -1.99
CEP290-204ENST00000547926 SRFBP1Q8NEF9 429 aaKnown RBP2.6□□□□□ -1.99
CEP290-204ENST00000547926 OR52N4Q8NGI2 321 aa2.6□□□□□ -1.99
CEP290-204ENST00000547926 SCAMP5Q8TAC9 235 aa2.6□□□□□ -1.99
CEP290-204ENST00000547926 KAT2AQ92830 837 aa2.6□□□□□ -1.99
CEP290-204ENST00000547926 MPHOSPH6Q99547 160 aaKnown RBP2.6□□□□□ -1.99
CEP290-204ENST00000547926 KATNAL1Q9BW62 490 aa2.6□□□□□ -1.99
CEP290-204ENST00000547926 PAPOLBQ9NRJ5 636 aaKnown RBP2.6□□□□□ -1.99
CEP290-204ENST00000547926 TAGLN3Q9UI15 199 aa2.6□□□□□ -1.99
CEP290-204ENST00000547926 UTS2RQ9UKP6 389 aa2.6□□□□□ -1.99
CEP290-204ENST00000547926 FBXO4Q9UKT5 387 aa2.6□□□□□ -1.99
CEP290-204ENST00000547926 AGO2Q9UKV8 859 aaKnown RBP2.6□□□□□ -1.99
CEP290-204ENST00000547926 HS3ST3B1Q9Y662 390 aa2.6□□□□□ -1.99
CEP290-204ENST00000547926 AGAP5A6NIR3 686 aa2.59□□□□□ -1.99
CEP290-204ENST00000547926 A6NNC1 897 aa2.59□□□□□ -1.99
CEP290-204ENST00000547926 F8W810 466 aa2.59□□□□□ -1.99
CEP290-204ENST00000547926 H3BNX3 289 aa2.59□□□□□ -1.99
CEP290-204ENST00000547926 ACKR2O00590 384 aa2.59□□□□□ -1.99
CEP290-204ENST00000547926 GRID2O43424 1007 aa2.59□□□□□ -1.99
CEP290-204ENST00000547926 TLX3O43711 291 aaPredicted RBP2.59□□□□□ -1.99
CEP290-204ENST00000547926 SLC28A2O43868 658 aa2.59□□□□□ -1.99
CEP290-204ENST00000547926 OAZ2O95190 189 aa2.59□□□□□ -1.99
CEP290-204ENST00000547926 CYP3A4P08684 503 aa2.59□□□□□ -1.99
CEP290-204ENST00000547926 TMEM191BP0C7N4 346 aa2.59□□□□□ -1.99
CEP290-204ENST00000547926 TGM2P21980 687 aa2.59□□□□□ -1.99
CEP290-204ENST00000547926 GRK5P34947 590 aa2.59□□□□□ -1.99
CEP290-204ENST00000547926 CDKN2AP42771 156 aaKnown RBP2.59□□□□□ -1.99
CEP290-204ENST00000547926 TLE3Q04726 772 aa2.59□□□□□ -1.99
CEP290-204ENST00000547926 SMTNL2Q2TAL5 461 aa2.59□□□□□ -1.99
CEP290-204ENST00000547926 ZACNQ401N2 412 aa2.59□□□□□ -1.99
CEP290-204ENST00000547926 TRIM60Q495X7 471 aa2.59□□□□□ -1.99
CEP290-204ENST00000547926 NUGGCQ68CJ6 796 aa2.59□□□□□ -1.99
CEP290-204ENST00000547926 PGBD2Q6P3X8 592 aa2.59□□□□□ -1.99
CEP290-204ENST00000547926 ZNF549Q6P9A3 640 aa2.59□□□□□ -1.99
CEP290-204ENST00000547926 COLCA1Q6ZS62 124 aa2.59□□□□□ -1.99
CEP290-204ENST00000547926 MMP21Q8N119 569 aa2.59□□□□□ -1.99
CEP290-204ENST00000547926 HMGB4Q8WW32 186 aa2.59□□□□□ -1.99
CEP290-204ENST00000547926 IP6K1Q92551 441 aa2.59□□□□□ -1.99
CEP290-204ENST00000547926 ATP2A3Q93084 1043 aa2.59□□□□□ -1.99
CEP290-204ENST00000547926 TUBB6Q9BUF5 446 aa2.59□□□□□ -1.99
CEP290-204ENST00000547926 SORBS1Q9BX66 1292 aaKnown RBP2.59□□□□□ -1.99
CEP290-204ENST00000547926 MLXIPQ9HAP2 919 aa2.59□□□□□ -1.99
CEP290-204ENST00000547926 IL21RQ9HBE5 538 aa2.59□□□□□ -1.99
CEP290-204ENST00000547926 ERVK-5Q9HDB9 667 aa2.59□□□□□ -1.99
CEP290-204ENST00000547926 PLCB1Q9NQ66 1216 aa2.59□□□□□ -1.99
CEP290-204ENST00000547926 THSD1Q9NS62 852 aa2.59□□□□□ -1.99
CEP290-204ENST00000547926 POT1Q9NUX5 634 aa2.59□□□□□ -1.99
CEP290-204ENST00000547926 IPO11Q9UI26 975 aaKnown RBP2.59□□□□□ -1.99
CEP290-204ENST00000547926 PCDHA12Q9UN75 941 aa2.59□□□□□ -1.99
CEP290-204ENST00000547926 COPG1Q9Y678 874 aaKnown RBP2.59□□□□□ -1.99
CEP290-204ENST00000547926 SQORQ9Y6N5 450 aa2.59□□□□□ -1.99
CEP290-204ENST00000547926 CYP3A7-CYP3A51PA0A087WV96 503 aa2.59□□□□□ -2
CEP290-204ENST00000547926 TBC1D3DA0A087WVF3 549 aa2.59□□□□□ -2
CEP290-204ENST00000547926 TBC1D3IA0A087WXS9 549 aa2.59□□□□□ -2
CEP290-204ENST00000547926 TBC1D3EA0A087X179 549 aa2.59□□□□□ -2
CEP290-204ENST00000547926 TBC1D3KA0A087X1G2 549 aa2.59□□□□□ -2
CEP290-204ENST00000547926 KIR2DS5A0A0G2JLQ3 304 aa2.59□□□□□ -2
CEP290-204ENST00000547926 TMEM272A0A1B0GTI8 110 aa2.59□□□□□ -2
CEP290-204ENST00000547926 TBC1D3BA6NDS4 549 aa2.59□□□□□ -2
CEP290-204ENST00000547926 TBC1D3FA6NER0 549 aaPredicted RBP2.59□□□□□ -2
CEP290-204ENST00000547926 TBC1D3LB9A6J9 549 aa2.59□□□□□ -2
CEP290-204ENST00000547926 KIR2DS3K7RE56 304 aa2.59□□□□□ -2
CEP290-204ENST00000547926 ATG13O75143 517 aa2.59□□□□□ -2
CEP290-204ENST00000547926 USP12O75317 370 aa2.59□□□□□ -2
CEP290-204ENST00000547926 SKAP2O75563 359 aaPredicted RBP2.59□□□□□ -2
CEP290-204ENST00000547926 HEXIM1O94992 359 aaKnown RBP2.59□□□□□ -2
CEP290-204ENST00000547926 NDUFB8O95169 186 aa2.59□□□□□ -2
CEP290-204ENST00000547926 SGPL1O95470 568 aa2.59□□□□□ -2
CEP290-204ENST00000547926 ALDOAP04075 364 aaKnown RBP2.59□□□□□ -2
CEP290-204ENST00000547926 CYP21A2P08686 494 aa2.59□□□□□ -2
CEP290-204ENST00000547926 TBC1D3HP0C7X1 549 aa2.59□□□□□ -2
CEP290-204ENST00000547926 CYP3A7P24462 503 aa2.59□□□□□ -2
CEP290-204ENST00000547926 SERPINF1P36955 418 aa2.59□□□□□ -2
CEP290-204ENST00000547926 RBM6P78332 1123 aaKnown RBP2.59□□□□□ -2
CEP290-204ENST00000547926 HDAC1Q13547 482 aaPredicted RBP2.59□□□□□ -2
CEP290-204ENST00000547926 TUBB8Q3ZCM7 444 aa2.59□□□□□ -2
CEP290-204ENST00000547926 ARL13AQ5H913 290 aaPredicted RBP2.59□□□□□ -2
CEP290-204ENST00000547926 ZNF569Q5MCW4 686 aa2.59□□□□□ -2
CEP290-204ENST00000547926 ASPHD1Q5U4P2 390 aa2.59□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms