RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 LGSNQ5TDP6 509 aa13.04□□□□□ -0.32
SCAF11-209ENST00000547018 NLRP9Q7RTR0 991 aa13.04□□□□□ -0.32
SCAF11-209ENST00000547018 RELL1Q8IUW5 271 aa13.04□□□□□ -0.32
SCAF11-209ENST00000547018 BANPQ8N9N5 519 aa13.04□□□□□ -0.32
SCAF11-209ENST00000547018 DENND1AQ8TEH3 1009 aa13.04□□□□□ -0.32
SCAF11-209ENST00000547018 CNGB3Q9NQW8 809 aa13.04□□□□□ -0.32
SCAF11-209ENST00000547018 FBXW11Q9UKB1 542 aa13.04□□□□□ -0.32
SCAF11-209ENST00000547018 TPP1O14773 563 aa13.04□□□□□ -0.32
SCAF11-209ENST00000547018 NR2C2P49116 596 aa13.04□□□□□ -0.32
SCAF11-209ENST00000547018 PCBP1Q15365 356 aaKnown RBP eCLIP13.04□□□□□ -0.32
SCAF11-209ENST00000547018 C14orf80Q86SX3 495 aa13.04□□□□□ -0.32
SCAF11-209ENST00000547018 RNF135Q8IUD6 432 aa13.04□□□□□ -0.32
SCAF11-209ENST00000547018 CFAP52Q8N1V2 620 aa13.04□□□□□ -0.32
SCAF11-209ENST00000547018 SGF29Q96ES7 293 aa13.04□□□□□ -0.32
SCAF11-209ENST00000547018 C20orf96Q9NUD7 363 aaPredicted RBP13.04□□□□□ -0.32
SCAF11-209ENST00000547018 FIS1Q9Y3D6 152 aa13.04□□□□□ -0.32
SCAF11-209ENST00000547018 GCATO75600 419 aa13.03□□□□□ -0.32
SCAF11-209ENST00000547018 USP46P62068 366 aa13.03□□□□□ -0.32
SCAF11-209ENST00000547018 PSMD5Q16401 504 aa13.03□□□□□ -0.32
SCAF11-209ENST00000547018 TMEM86AQ8N2M4 240 aa13.03□□□□□ -0.32
SCAF11-209ENST00000547018 KCNV2Q8TDN2 545 aa13.03□□□□□ -0.32
SCAF11-209ENST00000547018 ATP2A3Q93084 1043 aa13.03□□□□□ -0.32
SCAF11-209ENST00000547018 C11orf84Q9BUA3 381 aaPredicted RBP13.03□□□□□ -0.32
SCAF11-209ENST00000547018 IARS2Q9NSE4 1012 aaKnown RBP13.03□□□□□ -0.32
SCAF11-209ENST00000547018 BFARQ9NZS9 450 aa13.03□□□□□ -0.32
SCAF11-209ENST00000547018 SENP1Q9P0U3 644 aa13.03□□□□□ -0.32
SCAF11-209ENST00000547018 LRFN2Q9ULH4 789 aa13.03□□□□□ -0.32
SCAF11-209ENST00000547018 CHKBQ9Y259 395 aa13.03□□□□□ -0.32
SCAF11-209ENST00000547018 EDF1O60869 148 aaKnown RBP13.03□□□□□ -0.32
SCAF11-209ENST00000547018 KRT16P08779 473 aa13.03□□□□□ -0.32
SCAF11-209ENST00000547018 PIRTP0C851 137 aa13.03□□□□□ -0.32
SCAF11-209ENST00000547018 MYL2P10916 166 aa13.03□□□□□ -0.32
SCAF11-209ENST00000547018 SERPINB3P29508 390 aa13.03□□□□□ -0.32
SCAF11-209ENST00000547018 CRYMQ14894 314 aa13.03□□□□□ -0.32
SCAF11-209ENST00000547018 C10orf120Q5SQS8 335 aa13.03□□□□□ -0.32
SCAF11-209ENST00000547018 PDZD4Q76G19 769 aaPredicted RBP13.03□□□□□ -0.32
SCAF11-209ENST00000547018 BZW1Q7L1Q6 419 aaKnown RBP13.03□□□□□ -0.32
SCAF11-209ENST00000547018 PAF1Q8N7H5 531 aa13.03□□□□□ -0.32
SCAF11-209ENST00000547018 PCSK9Q8NBP7 692 aaKnown RBP13.03□□□□□ -0.32
SCAF11-209ENST00000547018 FCRL3Q96P31 734 aaPredicted RBP13.03□□□□□ -0.32
SCAF11-209ENST00000547018 PHGDHO43175 533 aaKnown RBP13.03□□□□□ -0.32
SCAF11-209ENST00000547018 FSBPO95073 299 aa13.03□□□□□ -0.32
SCAF11-209ENST00000547018 ZWINTO95229 277 aa13.03□□□□□ -0.32
SCAF11-209ENST00000547018 CLLU1OSQ5K130 101 aa13.03□□□□□ -0.32
SCAF11-209ENST00000547018 PRSS55Q6UWB4 352 aaPredicted RBP13.03□□□□□ -0.32
SCAF11-209ENST00000547018 STRA8Q7Z7C7 330 aa13.03□□□□□ -0.32
SCAF11-209ENST00000547018 ATPAF2Q8N5M1 289 aa13.03□□□□□ -0.32
SCAF11-209ENST00000547018 CDKL2Q92772 493 aa13.03□□□□□ -0.32
SCAF11-209ENST00000547018 TRIM55Q9BYV6 548 aa13.03□□□□□ -0.32
SCAF11-209ENST00000547018 XAB2Q9HCS7 855 aaKnown RBP13.03□□□□□ -0.32
SCAF11-209ENST00000547018 TBC1D13Q9NVG8 400 aa13.03□□□□□ -0.32
SCAF11-209ENST00000547018 PPARGC1AQ9UBK2 798 aaKnown RBP13.03□□□□□ -0.32
SCAF11-209ENST00000547018 ZFP69BQ9UJL9 534 aa13.03□□□□□ -0.32
SCAF11-209ENST00000547018 TLL2Q9Y6L7 1015 aa13.03□□□□□ -0.32
SCAF11-209ENST00000547018 RPSAP08865 295 aaKnown RBP13.02□□□□□ -0.32
SCAF11-209ENST00000547018 ARFIP2P53365 341 aa13.02□□□□□ -0.32
SCAF11-209ENST00000547018 NCALDP61601 193 aa13.02□□□□□ -0.32
SCAF11-209ENST00000547018 BST1Q10588 318 aa13.02□□□□□ -0.32
SCAF11-209ENST00000547018 DUSP4Q13115 394 aa13.02□□□□□ -0.32
SCAF11-209ENST00000547018 ZNF460Q14592 562 aa13.02□□□□□ -0.32
SCAF11-209ENST00000547018 ITIH4Q14624 930 aa13.02□□□□□ -0.32
SCAF11-209ENST00000547018 N4BP2L1Q5TBK1 243 aaPredicted RBP13.02□□□□□ -0.32
SCAF11-209ENST00000547018 APOPT1Q96IL0 206 aa13.02□□□□□ -0.32
SCAF11-209ENST00000547018 GPR62Q9BZJ7 368 aa13.02□□□□□ -0.32
SCAF11-209ENST00000547018 ACTR5Q9H9F9 607 aaPredicted RBP13.02□□□□□ -0.32
SCAF11-209ENST00000547018 GMIPQ9P107 970 aa13.02□□□□□ -0.32
SCAF11-209ENST00000547018 SLC39A10Q9ULF5 831 aa13.02□□□□□ -0.32
SCAF11-209ENST00000547018 Q9Y3F1 56 aa13.02□□□□□ -0.32
SCAF11-209ENST00000547018 NDC80O14777 642 aa13.02□□□□□ -0.33
SCAF11-209ENST00000547018 KPNA6O60684 536 aa13.02□□□□□ -0.33
SCAF11-209ENST00000547018 FBXO21O94952 628 aa13.02□□□□□ -0.33
SCAF11-209ENST00000547018 INHAP05111 366 aa13.02□□□□□ -0.33
SCAF11-209ENST00000547018 SESN3P58005 492 aa13.02□□□□□ -0.33
SCAF11-209ENST00000547018 CTBP1Q13363 440 aa13.02□□□□□ -0.33
SCAF11-209ENST00000547018 DEFB115Q30KQ5 88 aa13.02□□□□□ -0.33
SCAF11-209ENST00000547018 ALYREFQ86V81 257 aaKnown RBP13.02□□□□□ -0.33
SCAF11-209ENST00000547018 TDRPQ86YL5 185 aa13.02□□□□□ -0.33
SCAF11-209ENST00000547018 SMC1BQ8NDV3 1235 aa13.02□□□□□ -0.33
SCAF11-209ENST00000547018 NCAPGQ9BPX3 1015 aa13.02□□□□□ -0.33
SCAF11-209ENST00000547018 KDM4CQ9H3R0 1056 aa13.02□□□□□ -0.33
SCAF11-209ENST00000547018 RBM22Q9NW64 420 aaKnown RBP eCLIP13.02□□□□□ -0.33
SCAF11-209ENST00000547018 OSER1Q9NX31 292 aa13.02□□□□□ -0.33
SCAF11-209ENST00000547018 USP3Q9Y6I4 520 aa13.02□□□□□ -0.33
SCAF11-209ENST00000547018 PRPF4O43172 522 aaKnown RBP eCLIP13.01□□□□□ -0.33
SCAF11-209ENST00000547018 DGKIO75912 1065 aa13.01□□□□□ -0.33
SCAF11-209ENST00000547018 IRF1P10914 325 aa13.01□□□□□ -0.33
SCAF11-209ENST00000547018 DNAJB2P25686 324 aa13.01□□□□□ -0.33
SCAF11-209ENST00000547018 ALDH18A1P54886 795 aaKnown RBP13.01□□□□□ -0.33
SCAF11-209ENST00000547018 KDSRQ06136 332 aa13.01□□□□□ -0.33
SCAF11-209ENST00000547018 ACVR1CQ8NER5 493 aa13.01□□□□□ -0.33
SCAF11-209ENST00000547018 FICDQ9BVA6 458 aa13.01□□□□□ -0.33
SCAF11-209ENST00000547018 CHST12Q9NRB3 414 aa13.01□□□□□ -0.33
SCAF11-209ENST00000547018 OPHN1O60890 802 aa13.01□□□□□ -0.33
SCAF11-209ENST00000547018 POLBP06746 335 aa13.01□□□□□ -0.33
SCAF11-209ENST00000547018 MXRA7P84157 204 aa13.01□□□□□ -0.33
SCAF11-209ENST00000547018 GRIK3Q13003 919 aa13.01□□□□□ -0.33
SCAF11-209ENST00000547018 RAP1GAP2Q684P5 730 aa13.01□□□□□ -0.33
SCAF11-209ENST00000547018 LDB1Q86U70 411 aaPredicted RBP13.01□□□□□ -0.33
SCAF11-209ENST00000547018 TMEM173Q86WV6 379 aaPredicted RBP13.01□□□□□ -0.33
SCAF11-209ENST00000547018 PARP9Q8IXQ6 854 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms