RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 PDGFRAP16234 1089 aa16.96■□□□□ 0.31
BRF1-208ENST00000546997 GM2AP17900 193 aa16.96■□□□□ 0.31
BRF1-208ENST00000546997 GPD1P21695 349 aa16.96■□□□□ 0.31
BRF1-208ENST00000546997 SCNN1AP37088 669 aa16.96■□□□□ 0.31
BRF1-208ENST00000546997 ZNF143P52747 638 aaPredicted RBP16.96■□□□□ 0.31
BRF1-208ENST00000546997 IFRD2Q12894 506 aaPredicted RBP16.96■□□□□ 0.31
BRF1-208ENST00000546997 TRIP13Q15645 432 aaPredicted RBP16.96■□□□□ 0.31
BRF1-208ENST00000546997 C15orf59Q2T9L4 293 aaPredicted RBP16.96■□□□□ 0.31
BRF1-208ENST00000546997 MGAT5BQ3V5L5 792 aa16.96■□□□□ 0.31
BRF1-208ENST00000546997 LRRC8CQ8TDW0 803 aa16.96■□□□□ 0.31
BRF1-208ENST00000546997 MAML1Q92585 1016 aa16.96■□□□□ 0.31
BRF1-208ENST00000546997 FAM149B1Q96BN6 582 aa16.96■□□□□ 0.31
BRF1-208ENST00000546997 ADAM33Q9BZ11 813 aa16.96■□□□□ 0.31
BRF1-208ENST00000546997 MRPL17Q9NRX2 175 aaKnown RBP16.96■□□□□ 0.31
BRF1-208ENST00000546997 NINJ2Q9NZG7 142 aa16.96■□□□□ 0.31
BRF1-208ENST00000546997 COL4A4P53420 1690 aaPredicted RBP16.96■□□□□ 0.31
BRF1-208ENST00000546997 ATG2AQ2TAZ0 1938 aa16.95■□□□□ 0.3
BRF1-208ENST00000546997 LIASO43766 372 aa16.95■□□□□ 0.3
BRF1-208ENST00000546997 LILRB3O75022 631 aa16.95■□□□□ 0.3
BRF1-208ENST00000546997 KRT7P08729 469 aa16.95■□□□□ 0.3
BRF1-208ENST00000546997 TFE3P19532 575 aaPredicted RBP16.95■□□□□ 0.3
BRF1-208ENST00000546997 IL1R2P27930 398 aa16.95■□□□□ 0.3
BRF1-208ENST00000546997 SMARCB1Q12824 385 aa16.95■□□□□ 0.3
BRF1-208ENST00000546997 ACAP1Q15027 740 aa16.95■□□□□ 0.3
BRF1-208ENST00000546997 HADHQ16836 314 aaKnown RBP16.95■□□□□ 0.3
BRF1-208ENST00000546997 CCDC14Q49A88 953 aa16.95■□□□□ 0.3
BRF1-208ENST00000546997 DRICH1Q6PGQ1 229 aaPredicted RBP16.95■□□□□ 0.3
BRF1-208ENST00000546997 C8orf48Q96LL4 319 aa16.95■□□□□ 0.3
BRF1-208ENST00000546997 TRIM4Q9C037 500 aa16.95■□□□□ 0.3
BRF1-208ENST00000546997 MMADHCQ9H3L0 296 aaPredicted RBP16.95■□□□□ 0.3
BRF1-208ENST00000546997 SSU72Q9NP77 194 aaKnown RBP16.95■□□□□ 0.3
BRF1-208ENST00000546997 HAO1Q9UJM8 370 aa16.95■□□□□ 0.3
BRF1-208ENST00000546997 USP3Q9Y6I4 520 aa16.95■□□□□ 0.3
BRF1-208ENST00000546997 MAGEA13PA6NCF6 341 aa16.95■□□□□ 0.3
BRF1-208ENST00000546997 TEX28O15482 410 aa16.95■□□□□ 0.3
BRF1-208ENST00000546997 ABLIM3O94929 683 aa16.95■□□□□ 0.3
BRF1-208ENST00000546997 FBXO21O94952 628 aa16.95■□□□□ 0.3
BRF1-208ENST00000546997 FYNP06241 537 aa16.95■□□□□ 0.3
BRF1-208ENST00000546997 CTSAP10619 480 aa16.95■□□□□ 0.3
BRF1-208ENST00000546997 HAPLN1P10915 354 aaPredicted RBP16.95■□□□□ 0.3
BRF1-208ENST00000546997 DNAJB1P25685 340 aa16.95■□□□□ 0.3
BRF1-208ENST00000546997 WDR4P57081 412 aaKnown RBP16.95■□□□□ 0.3
BRF1-208ENST00000546997 USP46P62068 366 aa16.95■□□□□ 0.3
BRF1-208ENST00000546997 YWHAZP63104 245 aaKnown RBP16.95■□□□□ 0.3
BRF1-208ENST00000546997 CUL3Q13618 768 aa16.95■□□□□ 0.3
BRF1-208ENST00000546997 KPNB1Q14974 876 aaKnown RBP16.95■□□□□ 0.3
BRF1-208ENST00000546997 CDO1Q16878 200 aa16.95■□□□□ 0.3
BRF1-208ENST00000546997 ZNF461Q8TAF7 563 aa16.95■□□□□ 0.3
BRF1-208ENST00000546997 C10orf82Q8WW14 230 aa16.95■□□□□ 0.3
BRF1-208ENST00000546997 CNPY3Q9BT09 278 aa16.95■□□□□ 0.3
BRF1-208ENST00000546997 DENND2DQ9H6A0 471 aaPredicted RBP16.95■□□□□ 0.3
BRF1-208ENST00000546997 ZWILCHQ9H900 591 aa16.95■□□□□ 0.3
BRF1-208ENST00000546997 CCDC22O60826 627 aa16.94■□□□□ 0.3
BRF1-208ENST00000546997 SEC24AO95486 1093 aa16.94■□□□□ 0.3
BRF1-208ENST00000546997 ATF2P15336 505 aa16.94■□□□□ 0.3
BRF1-208ENST00000546997 ATF6P18850 670 aa16.94■□□□□ 0.3
BRF1-208ENST00000546997 TARSP26639 723 aaKnown RBP16.94■□□□□ 0.3
BRF1-208ENST00000546997 CA8P35219 290 aa16.94■□□□□ 0.3
BRF1-208ENST00000546997 ADCY8P40145 1251 aa16.94■□□□□ 0.3
BRF1-208ENST00000546997 PBX2P40425 430 aa16.94■□□□□ 0.3
BRF1-208ENST00000546997 ERVFC1P60507 584 aa16.94■□□□□ 0.3
BRF1-208ENST00000546997 KYNUQ16719 465 aa16.94■□□□□ 0.3
BRF1-208ENST00000546997 EFHC1Q5JVL4 640 aa16.94■□□□□ 0.3
BRF1-208ENST00000546997 PM20D1Q6GTS8 502 aa16.94■□□□□ 0.3
BRF1-208ENST00000546997 ARCQ7LC44 396 aa16.94■□□□□ 0.3
BRF1-208ENST00000546997 TRABD2AQ86V40 505 aa16.94■□□□□ 0.3
BRF1-208ENST00000546997 SRRM1Q8IYB3 904 aaKnown RBP16.94■□□□□ 0.3
BRF1-208ENST00000546997 C2orf15Q8WU43 125 aaKnown RBP16.94■□□□□ 0.3
BRF1-208ENST00000546997 NR1H4Q96RI1 486 aaPredicted RBP16.94■□□□□ 0.3
BRF1-208ENST00000546997 GDF15Q99988 308 aa16.94■□□□□ 0.3
BRF1-208ENST00000546997 GORASP1Q9BQQ3 440 aa16.94■□□□□ 0.3
BRF1-208ENST00000546997 UBE2OQ9C0C9 1292 aaKnown RBP16.94■□□□□ 0.3
BRF1-208ENST00000546997 ANAPC5Q9UJX4 755 aa16.94■□□□□ 0.3
BRF1-208ENST00000546997 DNPEPQ9ULA0 475 aa16.94■□□□□ 0.3
BRF1-208ENST00000546997 EFR3BQ9Y2G0 817 aa16.94■□□□□ 0.3
BRF1-208ENST00000546997 YBX2Q9Y2T7 364 aaKnown RBP16.94■□□□□ 0.3
BRF1-208ENST00000546997 REV3LO60673 3130 aa16.94■□□□□ 0.3
BRF1-208ENST00000546997 RASA4BC9J798 803 aa16.93■□□□□ 0.3
BRF1-208ENST00000546997 DPYSL4O14531 572 aa16.93■□□□□ 0.3
BRF1-208ENST00000546997 RASA4O43374 803 aa16.93■□□□□ 0.3
BRF1-208ENST00000546997 RNF8O76064 485 aa16.93■□□□□ 0.3
BRF1-208ENST00000546997 KLRC2P26717 231 aa16.93■□□□□ 0.3
BRF1-208ENST00000546997 SDC4P31431 198 aa16.93■□□□□ 0.3
BRF1-208ENST00000546997 CHKAP35790 457 aa16.93■□□□□ 0.3
BRF1-208ENST00000546997 PGFP49763 221 aa16.93■□□□□ 0.3
BRF1-208ENST00000546997 ITGA8P53708 1063 aa16.93■□□□□ 0.3
BRF1-208ENST00000546997 PITX1P78337 314 aaPredicted RBP16.93■□□□□ 0.3
BRF1-208ENST00000546997 SMTNL2Q2TAL5 461 aa16.93■□□□□ 0.3
BRF1-208ENST00000546997 KCNT1Q5JUK3 1230 aa16.93■□□□□ 0.3
BRF1-208ENST00000546997 SYPL2Q5VXT5 272 aa16.93■□□□□ 0.3
BRF1-208ENST00000546997 DEFB106AQ8N104 65 aa16.93■□□□□ 0.3
BRF1-208ENST00000546997 CYP4X1Q8N118 509 aa16.93■□□□□ 0.3
BRF1-208ENST00000546997 CCDC89Q8N998 374 aa16.93■□□□□ 0.3
BRF1-208ENST00000546997 TTC25Q96NG3 672 aa16.93■□□□□ 0.3
BRF1-208ENST00000546997 C11orf84Q9BUA3 381 aaPredicted RBP16.93■□□□□ 0.3
BRF1-208ENST00000546997 ASNSD1Q9NWL6 643 aa16.93■□□□□ 0.3
BRF1-208ENST00000546997 NMRK1Q9NWW6 199 aa16.93■□□□□ 0.3
BRF1-208ENST00000546997 DLGAP2Q9P1A6 1054 aa16.93■□□□□ 0.3
BRF1-208ENST00000546997 AFF4Q9UHB7 1163 aaKnown RBP16.93■□□□□ 0.3
BRF1-208ENST00000546997 DRG1Q9Y295 367 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms