RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 NXNQ6DKJ4 435 aa15.41■□□□□ 0.06
USP28-214ENST00000545540 ZNF280DQ6N043 979 aa15.41■□□□□ 0.06
USP28-214ENST00000545540 FAM156AQ8NDB6 213 aa15.41■□□□□ 0.06
USP28-214ENST00000545540 VRTNQ9H8Y1 702 aa15.41■□□□□ 0.06
USP28-214ENST00000545540 MKI67P46013 3256 aaKnown RBP15.41■□□□□ 0.06
USP28-214ENST00000545540 SIP14410 1827 aa15.41■□□□□ 0.06
USP28-214ENST00000545540 A0A1B0GVG6 124 aa15.41■□□□□ 0.06
USP28-214ENST00000545540 STX16-NPEPL1H3BU86 382 aa15.41■□□□□ 0.06
USP28-214ENST00000545540 DESP17661 470 aa15.41■□□□□ 0.06
USP28-214ENST00000545540 COPAP53621 1224 aa15.41■□□□□ 0.06
USP28-214ENST00000545540 AP2B1P63010 937 aa15.41■□□□□ 0.06
USP28-214ENST00000545540 ZNF484Q5JVG2 852 aa15.41■□□□□ 0.06
USP28-214ENST00000545540 RABGAP1LQ5R372 815 aa15.41■□□□□ 0.06
USP28-214ENST00000545540 PTAR1Q7Z6K3 402 aaPredicted RBP15.41■□□□□ 0.06
USP28-214ENST00000545540 TRIM42Q8IWZ5 723 aa15.41■□□□□ 0.06
USP28-214ENST00000545540 ANKRD52Q8NB46 1076 aa15.41■□□□□ 0.06
USP28-214ENST00000545540 ARRDC4Q8NCT1 418 aa15.41■□□□□ 0.06
USP28-214ENST00000545540 IARS2Q9NSE4 1012 aaKnown RBP15.41■□□□□ 0.06
USP28-214ENST00000545540 NUDT5Q9UKK9 219 aa15.41■□□□□ 0.06
USP28-214ENST00000545540 PCDHGB4Q9UN71 923 aa15.41■□□□□ 0.06
USP28-214ENST00000545540 PCDHGB5Q9Y5G0 923 aa15.41■□□□□ 0.06
USP28-214ENST00000545540 SMIM28A0A1B0GU29 152 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 AP1G2O75843 785 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 JUNP05412 331 aaKnown RBP15.4■□□□□ 0.06
USP28-214ENST00000545540 SRGAP2BP0DMP2 458 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 MPSTP25325 297 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 RAP1GDS1P52306 607 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 AQP4P55087 323 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 WSCD1Q658N2 575 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 NPWQ8N729 165 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 CERS2Q96G23 380 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 PAPOLBQ9NRJ5 636 aaKnown RBP15.4■□□□□ 0.06
USP28-214ENST00000545540 IREB2P48200 963 aaKnown RBP15.4■□□□□ 0.06
USP28-214ENST00000545540 SARNPP82979 210 aaKnown RBP15.4■□□□□ 0.06
USP28-214ENST00000545540 NIPAL4Q0D2K0 466 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 TRIP10Q15642 601 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 GRAMD1BQ3KR37 738 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 SLC26A9Q7LBE3 791 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 OTOP3Q7RTS5 596 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 GPRIN1Q7Z2K8 1008 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 SPATA22Q8NHS9 363 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 LENG8Q96PV6 779 aaPredicted RBP15.4■□□□□ 0.06
USP28-214ENST00000545540 ECSITQ9BQ95 431 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 NUF2Q9BZD4 464 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 SIK2Q9H0K1 926 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 TMEM30AQ9NV96 361 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 A0A096LPK6 155 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 YJEFN3A6XGL0 299 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 TMEM233B4DJY2 109 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 EEF2KO00418 725 aaKnown RBP15.4■□□□□ 0.06
USP28-214ENST00000545540 DPYSL4O14531 572 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 MAGEC1O60732 1142 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 OPHN1O60890 802 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 SLC25A27O95847 323 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 MT-CO1P00395 513 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 LYNP07948 512 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 USP17L7P0C7H9 530 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 SMPD1P17405 629 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 ERCC2P18074 760 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 GJA5P36382 358 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 DSG1Q02413 1049 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 DEUP1Q05D60 604 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 DLG1Q12959 904 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 OTUD1Q5VV17 481 aaPredicted RBP15.4■□□□□ 0.06
USP28-214ENST00000545540 IRGCQ6NXR0 463 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 ERO1BQ86YB8 467 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 MYLK4Q86YV6 388 aaPredicted RBP15.4■□□□□ 0.06
USP28-214ENST00000545540 BEST2Q8NFU1 509 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 C20orf96Q9NUD7 363 aaPredicted RBP15.4■□□□□ 0.06
USP28-214ENST00000545540 ZNF212Q9UDV6 495 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 FZD10Q9ULW2 581 aa15.4■□□□□ 0.06
USP28-214ENST00000545540 HTTP42858 3142 aa15.39■□□□□ 0.06
USP28-214ENST00000545540 TPSB2P20231 275 aa15.39■□□□□ 0.05
USP28-214ENST00000545540 SLC26A2P50443 739 aa15.39■□□□□ 0.05
USP28-214ENST00000545540 ABCE1P61221 599 aaKnown RBP15.39■□□□□ 0.05
USP28-214ENST00000545540 CCNIQ14094 377 aa15.39■□□□□ 0.05
USP28-214ENST00000545540 TPSAB1Q15661 275 aa15.39■□□□□ 0.05
USP28-214ENST00000545540 EFHC1Q5JVL4 640 aa15.39■□□□□ 0.05
USP28-214ENST00000545540 NET1Q7Z628 596 aaPredicted RBP15.39■□□□□ 0.05
USP28-214ENST00000545540 DPP9Q86TI2 863 aa15.39■□□□□ 0.05
USP28-214ENST00000545540 EXOC8Q8IYI6 725 aa15.39■□□□□ 0.05
USP28-214ENST00000545540 GCNAQ96QF7 691 aa15.39■□□□□ 0.05
USP28-214ENST00000545540 APBA2Q99767 749 aa15.39■□□□□ 0.05
USP28-214ENST00000545540 VCXQ9H320 206 aa15.39■□□□□ 0.05
USP28-214ENST00000545540 LRRC4Q9HBW1 653 aa15.39■□□□□ 0.05
USP28-214ENST00000545540 ANGPTL2Q9UKU9 493 aa15.39■□□□□ 0.05
USP28-214ENST00000545540 USP3Q9Y6I4 520 aa15.39■□□□□ 0.05
USP28-214ENST00000545540 GRM5P41594 1212 aa15.39■□□□□ 0.05
USP28-214ENST00000545540 MATKP42679 507 aa15.39■□□□□ 0.05
USP28-214ENST00000545540 BCAT1P54687 386 aa15.39■□□□□ 0.05
USP28-214ENST00000545540 LAMC2Q13753 1193 aa15.39■□□□□ 0.05
USP28-214ENST00000545540 RASIP1Q5U651 963 aa15.39■□□□□ 0.05
USP28-214ENST00000545540 KIAA0319Q5VV43 1072 aa15.39■□□□□ 0.05
USP28-214ENST00000545540 APPL2Q8NEU8 664 aa15.39■□□□□ 0.05
USP28-214ENST00000545540 LRRC39Q96DD0 335 aa15.39■□□□□ 0.05
USP28-214ENST00000545540 SNX27Q96L92 541 aa15.39■□□□□ 0.05
USP28-214ENST00000545540 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.39■□□□□ 0.05
USP28-214ENST00000545540 KIAA1257Q9ULG3 409 aa15.39■□□□□ 0.05
USP28-214ENST00000545540 GLRA3O75311 464 aa15.39■□□□□ 0.05
USP28-214ENST00000545540 JCHAINP01591 159 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms