RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 ZBED4O75132 1171 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 NDUFA10O95299 355 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 F9P00740 461 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 FESP07332 822 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 TSPY4P0CV99 314 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 TSPY10P0CW01 314 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 MAPK4P31152 587 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 POLD2P49005 469 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 DGKQP52824 942 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 MRPS21P82921 87 aaKnown RBP4.51□□□□□ -1.69
SNHG1-222ENST00000545308 TDGQ13569 410 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 GPR68Q15743 365 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 CYP1B1Q16678 543 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 ST3GAL2Q16842 350 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 SPDYE7PQ495Y7 208 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 TREML2Q5T2D2 321 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 HECTD2Q5U5R9 776 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 LIPMQ5VYY2 423 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 LRRC8DQ7L1W4 858 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 ARMC8Q8IUR7 673 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 ANKRD44Q8N8A2 993 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 B3GALNT2Q8NCR0 500 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 LSM14AQ8ND56 463 aaKnown RBP4.51□□□□□ -1.69
SNHG1-222ENST00000545308 CPEB3Q8NE35 698 aaKnown RBP4.51□□□□□ -1.69
SNHG1-222ENST00000545308 NTN5Q8WTR8 489 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-222ENST00000545308 CLEC4CQ8WTT0 213 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 TRMT61AQ96FX7 289 aaKnown RBP4.51□□□□□ -1.69
SNHG1-222ENST00000545308 PRR25Q96S07 402 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 DPCDQ9BVM2 203 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-222ENST00000545308 TOR3AQ9H497 397 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 STN1Q9H668 368 aaKnown RBP4.51□□□□□ -1.69
SNHG1-222ENST00000545308 ZDHHC7Q9NXF8 308 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 DKK3Q9UBP4 350 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 CFDP1Q9UEE9 299 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-222ENST00000545308 SLC12A4Q9UP95 1085 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 GPR34Q9UPC5 381 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 PCDHB2Q9Y5E7 798 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 KIAA1107Q9UPP5 1409 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 LRRC9Q6ZRR7 1453 aa4.5□□□□□ -1.69
SNHG1-222ENST00000545308 VWDEQ8N2E2 1590 aa4.5□□□□□ -1.69
SNHG1-222ENST00000545308 HNRNPRO43390 633 aaKnown RBP4.5□□□□□ -1.69
SNHG1-222ENST00000545308 PMPCBO75439 489 aa4.5□□□□□ -1.69
SNHG1-222ENST00000545308 CDKL5O76039 1030 aa4.5□□□□□ -1.69
SNHG1-222ENST00000545308 SPDEFO95238 335 aa4.5□□□□□ -1.69
SNHG1-222ENST00000545308 CYP3A4P08684 503 aa4.5□□□□□ -1.69
SNHG1-222ENST00000545308 IL6RP08887 468 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-222ENST00000545308 ITPKBP27987 946 aa4.5□□□□□ -1.69
SNHG1-222ENST00000545308 GKP32189 559 aa4.5□□□□□ -1.69
SNHG1-222ENST00000545308 PNPLA4P41247 253 aa4.5□□□□□ -1.69
SNHG1-222ENST00000545308 RAD52P43351 418 aa4.5□□□□□ -1.69
SNHG1-222ENST00000545308 RCAN1P53805 252 aa4.5□□□□□ -1.69
SNHG1-222ENST00000545308 DRG2P55039 364 aaKnown RBP4.5□□□□□ -1.69
SNHG1-222ENST00000545308 RPP30P78346 268 aaKnown RBP4.5□□□□□ -1.69
SNHG1-222ENST00000545308 NUCB1Q02818 461 aa4.5□□□□□ -1.69
SNHG1-222ENST00000545308 DNASE1L3Q13609 305 aa4.5□□□□□ -1.69
SNHG1-222ENST00000545308 SF3B3Q15393 1217 aaKnown RBP4.5□□□□□ -1.69
SNHG1-222ENST00000545308 TBCCQ15814 346 aa4.5□□□□□ -1.69
SNHG1-222ENST00000545308 NFIL3Q16649 462 aa4.5□□□□□ -1.69
SNHG1-222ENST00000545308 FAM187BQ17R55 369 aa4.5□□□□□ -1.69
SNHG1-222ENST00000545308 TIGD2Q4W5G0 525 aa4.5□□□□□ -1.69
SNHG1-222ENST00000545308 FAM69AQ5T7M9 428 aa4.5□□□□□ -1.69
SNHG1-222ENST00000545308 LRCH2Q5VUJ6 765 aa4.5□□□□□ -1.69
SNHG1-222ENST00000545308 ACSM6Q6P461 480 aa4.5□□□□□ -1.69
SNHG1-222ENST00000545308 TMTC3Q6ZXV5 915 aa4.5□□□□□ -1.69
SNHG1-222ENST00000545308 B4GALNT4Q76KP1 1039 aa4.5□□□□□ -1.69
SNHG1-222ENST00000545308 OR8H2Q8N162 312 aa4.5□□□□□ -1.69
SNHG1-222ENST00000545308 SSH3Q8TE77 659 aa4.5□□□□□ -1.69
SNHG1-222ENST00000545308 CREB3L4Q8TEY5 395 aa4.5□□□□□ -1.69
SNHG1-222ENST00000545308 ARRDC3Q96B67 414 aa4.5□□□□□ -1.69
SNHG1-222ENST00000545308 MASTLQ96GX5 879 aa4.5□□□□□ -1.69
SNHG1-222ENST00000545308 FAR2Q96K12 515 aa4.5□□□□□ -1.69
SNHG1-222ENST00000545308 PPP1R10Q96QC0 940 aaKnown RBP4.5□□□□□ -1.69
SNHG1-222ENST00000545308 PIGSQ96S52 555 aa4.5□□□□□ -1.69
SNHG1-222ENST00000545308 SDF4Q9BRK5 362 aa4.5□□□□□ -1.69
SNHG1-222ENST00000545308 TAOK3Q9H2K8 898 aa4.5□□□□□ -1.69
SNHG1-222ENST00000545308 GHITMQ9H3K2 345 aa4.5□□□□□ -1.69
SNHG1-222ENST00000545308 SERHL2Q9H4I8 314 aa4.5□□□□□ -1.69
SNHG1-222ENST00000545308 PRKRIP1Q9H875 184 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-222ENST00000545308 KRT84Q9NSB2 600 aa4.5□□□□□ -1.69
SNHG1-222ENST00000545308 GDAQ9Y2T3 454 aa4.5□□□□□ -1.69
SNHG1-222ENST00000545308 CDK13Q14004 1512 aaKnown RBP4.5□□□□□ -1.69
SNHG1-222ENST00000545308 DHX29Q7Z478 1369 aaKnown RBP4.5□□□□□ -1.69
SNHG1-222ENST00000545308 PREX2Q70Z35 1606 aa4.5□□□□□ -1.69
SNHG1-222ENST00000545308 CDK12Q9NYV4 1490 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-222ENST00000545308 ADGRA2Q96PE1 1338 aa4.49□□□□□ -1.69
SNHG1-222ENST00000545308 SAMD9LQ8IVG5 1584 aa4.49□□□□□ -1.69
SNHG1-222ENST00000545308 RTEL1-TNFRSF6BF6WH68 1400 aa4.49□□□□□ -1.69
SNHG1-222ENST00000545308 TBC1D3DA0A087WVF3 549 aa4.49□□□□□ -1.69
SNHG1-222ENST00000545308 TBC1D3IA0A087WXS9 549 aa4.49□□□□□ -1.69
SNHG1-222ENST00000545308 TBC1D3EA0A087X179 549 aa4.49□□□□□ -1.69
SNHG1-222ENST00000545308 TBC1D3KA0A087X1G2 549 aa4.49□□□□□ -1.69
SNHG1-222ENST00000545308 TBC1D3BA6NDS4 549 aa4.49□□□□□ -1.69
SNHG1-222ENST00000545308 TBC1D3FA6NER0 549 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-222ENST00000545308 UNC119BA6NIH7 251 aa4.49□□□□□ -1.69
SNHG1-222ENST00000545308 FAM90A7PA6NKC0 464 aa4.49□□□□□ -1.69
SNHG1-222ENST00000545308 FAM90A22PA8MWA6 464 aa4.49□□□□□ -1.69
SNHG1-222ENST00000545308 FAM90A12PA8MX19 464 aa4.49□□□□□ -1.69
SNHG1-222ENST00000545308 FAM90A23PA8MXZ1 464 aa4.49□□□□□ -1.69
SNHG1-222ENST00000545308 TBC1D3LB9A6J9 549 aa4.49□□□□□ -1.69
SNHG1-222ENST00000545308 PSMD9O00233 223 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms