RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 SFSWAPQ12872 951 aaKnown RBP7.65□□□□□ -1.18
CPSF7-224ENST00000544990 MTA1Q13330 715 aa7.65□□□□□ -1.18
CPSF7-224ENST00000544990 SIM2Q14190 667 aaPredicted RBP7.65□□□□□ -1.18
CPSF7-224ENST00000544990 CRY1Q16526 586 aa7.65□□□□□ -1.18
CPSF7-224ENST00000544990 DCAF6Q58WW2 860 aa7.65□□□□□ -1.18
CPSF7-224ENST00000544990 EMC10Q5UCC4 262 aa7.65□□□□□ -1.18
CPSF7-224ENST00000544990 TAF3Q5VWG9 929 aa7.65□□□□□ -1.18
CPSF7-224ENST00000544990 FYB2Q5VWT5 728 aa7.65□□□□□ -1.18
CPSF7-224ENST00000544990 SYPL2Q5VXT5 272 aa7.65□□□□□ -1.18
CPSF7-224ENST00000544990 CEP68Q76N32 757 aa7.65□□□□□ -1.18
CPSF7-224ENST00000544990 NOP9Q86U38 636 aaKnown RBP7.65□□□□□ -1.18
CPSF7-224ENST00000544990 CCDC117Q8IWD4 279 aaPredicted RBP7.65□□□□□ -1.18
CPSF7-224ENST00000544990 DHX40Q8IX18 779 aaKnown RBP7.65□□□□□ -1.18
CPSF7-224ENST00000544990 DEFB106AQ8N104 65 aa7.65□□□□□ -1.18
CPSF7-224ENST00000544990 CCDC33Q8N5R6 958 aa7.65□□□□□ -1.18
CPSF7-224ENST00000544990 ALLCQ8N6M5 410 aa7.65□□□□□ -1.18
CPSF7-224ENST00000544990 ATP6V0D2Q8N8Y2 350 aa7.65□□□□□ -1.18
CPSF7-224ENST00000544990 ZNF557Q8N988 423 aaPredicted RBP7.65□□□□□ -1.18
CPSF7-224ENST00000544990 IL17RCQ8NAC3 791 aa7.65□□□□□ -1.18
CPSF7-224ENST00000544990 TXNDC5Q8NBS9 432 aaKnown RBP7.65□□□□□ -1.18
CPSF7-224ENST00000544990 TSTD1Q8NFU3 115 aa7.65□□□□□ -1.18
CPSF7-224ENST00000544990 RNF34Q969K3 372 aa7.65□□□□□ -1.18
CPSF7-224ENST00000544990 HHIPQ96QV1 700 aa7.65□□□□□ -1.18
CPSF7-224ENST00000544990 FUCA2Q9BTY2 467 aa7.65□□□□□ -1.18
CPSF7-224ENST00000544990 HSD3B7Q9H2F3 369 aa7.65□□□□□ -1.18
CPSF7-224ENST00000544990 EPC1Q9H2F5 836 aa7.65□□□□□ -1.18
CPSF7-224ENST00000544990 TMEM51Q9NW97 253 aa7.65□□□□□ -1.18
CPSF7-224ENST00000544990 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.65□□□□□ -1.18
CPSF7-224ENST00000544990 C2orf42Q9NWW7 574 aa7.65□□□□□ -1.18
CPSF7-224ENST00000544990 RRN3Q9NYV6 651 aa7.65□□□□□ -1.18
CPSF7-224ENST00000544990 NCDNQ9UBB6 729 aa7.65□□□□□ -1.18
CPSF7-224ENST00000544990 GMEB2Q9UKD1 530 aa7.65□□□□□ -1.18
CPSF7-224ENST00000544990 ATXN7L1Q9ULK2 861 aaPredicted RBP7.65□□□□□ -1.18
CPSF7-224ENST00000544990 SLC27A6Q9Y2P4 619 aa7.65□□□□□ -1.18
CPSF7-224ENST00000544990 WDFY4Q6ZS81 3184 aa7.65□□□□□ -1.19
CPSF7-224ENST00000544990 GFRA2O00451 464 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 NPC1O15118 1278 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 TRIM24O15164 1050 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 TIMM44O43615 452 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 TSPAN3O60637 253 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 DAB1O75553 588 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 GRAP2O75791 330 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 RPP40O75818 363 aaKnown RBP7.64□□□□□ -1.19
CPSF7-224ENST00000544990 SERPINC1P01008 464 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 ERBB2P04626 1255 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 MMEP08473 750 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 ABCB4P21439 1286 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 NTSR1P30989 418 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 GABRB2P47870 512 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 PXNP49023 591 aaPredicted RBP7.64□□□□□ -1.19
CPSF7-224ENST00000544990 JAM2P57087 298 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 CDR2Q01850 454 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 ARID5AQ03989 594 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 DMWDQ09019 674 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 MESP2Q0VG99 397 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 IQCB1Q15051 598 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 EIF4HQ15056 248 aaKnown RBP7.64□□□□□ -1.19
CPSF7-224ENST00000544990 TAF5Q15542 800 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 PTPN20Q4JDL3 420 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 USP39Q53GS9 565 aaKnown RBP7.64□□□□□ -1.19
CPSF7-224ENST00000544990 MPP7Q5T2T1 576 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 OLFML1Q6UWY5 402 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 TRIM72Q6ZMU5 477 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 PRR23BQ6ZRT6 265 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 FAM183BPQ6ZVS7 135 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 SLC26A9Q7LBE3 791 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 APTXQ7Z2E3 356 aaKnown RBP7.64□□□□□ -1.19
CPSF7-224ENST00000544990 ANKS1BQ7Z6G8 1248 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 TAC4Q86UU9 113 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 CHPFQ8IZ52 775 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 SUMF1Q8NBK3 374 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 ZNF397Q8NF99 534 aaPredicted RBP7.64□□□□□ -1.19
CPSF7-224ENST00000544990 GAB3Q8WWW8 586 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 DDX1Q92499 740 aaKnown RBP7.64□□□□□ -1.19
CPSF7-224ENST00000544990 RUBCNQ92622 972 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 GTPBP3Q969Y2 492 aaKnown RBP7.64□□□□□ -1.19
CPSF7-224ENST00000544990 SLC39A13Q96H72 371 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 BTN2A3PQ96KV6 586 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 FCRL2Q96LA5 508 aaPredicted RBP7.64□□□□□ -1.19
CPSF7-224ENST00000544990 SLC2A13Q96QE2 648 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 FAM204AQ9H8W3 233 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 DDIT4Q9NX09 232 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.64□□□□□ -1.19
CPSF7-224ENST00000544990 TJP2Q9UDY2 1190 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 EBF1Q9UH73 591 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 STAP1Q9ULZ2 295 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 SMG5Q9UPR3 1016 aaKnown RBP7.64□□□□□ -1.19
CPSF7-224ENST00000544990 PAXBP1Q9Y5B6 917 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 RALGAPA1Q6GYQ0 2036 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 EML5Q05BV3 1969 aa7.64□□□□□ -1.19
CPSF7-224ENST00000544990 SYNJ2BP-COX16A0A087WUM0 186 aa7.63□□□□□ -1.19
CPSF7-224ENST00000544990 GOLGA6L7A0A1B0GV03 622 aa7.63□□□□□ -1.19
CPSF7-224ENST00000544990 A0A1W2PQC6 194 aa7.63□□□□□ -1.19
CPSF7-224ENST00000544990 CDC14CA4D256 554 aa7.63□□□□□ -1.19
CPSF7-224ENST00000544990 KCNU1A8MYU2 1149 aa7.63□□□□□ -1.19
CPSF7-224ENST00000544990 PRRT4C9JH25 899 aa7.63□□□□□ -1.19
CPSF7-224ENST00000544990 M0QYT0 321 aa7.63□□□□□ -1.19
CPSF7-224ENST00000544990 SGK1O00141 431 aa7.63□□□□□ -1.19
CPSF7-224ENST00000544990 EPHB6O15197 1021 aa7.63□□□□□ -1.19
CPSF7-224ENST00000544990 TEX33O43247 280 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms