RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 ACOX1Q15067 660 aa13.06□□□□□ -0.32
CHD4-211ENST00000544484 OLFML2BQ68BL8 750 aa13.06□□□□□ -0.32
CHD4-211ENST00000544484 DOK6Q6PKX4 331 aa13.06□□□□□ -0.32
CHD4-211ENST00000544484 SNX8Q9Y5X2 465 aa13.06□□□□□ -0.32
CHD4-211ENST00000544484 IFRD1O00458 451 aaPredicted RBP13.05□□□□□ -0.32
CHD4-211ENST00000544484 CLDN5O00501 218 aa13.05□□□□□ -0.32
CHD4-211ENST00000544484 BANF1O75531 89 aa13.05□□□□□ -0.32
CHD4-211ENST00000544484 PCYT1AP49585 367 aa13.05□□□□□ -0.32
CHD4-211ENST00000544484 PPM1LQ5SGD2 360 aa13.05□□□□□ -0.32
CHD4-211ENST00000544484 ZCCHC9Q8N567 271 aaKnown RBP13.05□□□□□ -0.32
CHD4-211ENST00000544484 BAP1Q92560 729 aa13.05□□□□□ -0.32
CHD4-211ENST00000544484 MIEF1Q9NQG6 463 aa13.05□□□□□ -0.32
CHD4-211ENST00000544484 TRPC4Q9UBN4 977 aa13.05□□□□□ -0.32
CHD4-211ENST00000544484 SPATA31C2B4DYI2 1134 aa13.05□□□□□ -0.32
CHD4-211ENST00000544484 CCDC153Q494R4 210 aa13.05□□□□□ -0.32
CHD4-211ENST00000544484 HELQQ8TDG4 1101 aa13.05□□□□□ -0.32
CHD4-211ENST00000544484 ZNF75CPQ92670 426 aaPredicted RBP13.05□□□□□ -0.32
CHD4-211ENST00000544484 DPY30Q9C005 99 aa13.05□□□□□ -0.32
CHD4-211ENST00000544484 SPACA6W5XKT8 324 aa13.05□□□□□ -0.32
CHD4-211ENST00000544484 ADGRB2O60241 1585 aa13.05□□□□□ -0.32
CHD4-211ENST00000544484 KDM4FA0A1W2PPD8 638 aa13.05□□□□□ -0.32
CHD4-211ENST00000544484 HACD1B0YJ81 288 aa13.05□□□□□ -0.32
CHD4-211ENST00000544484 AMHP03971 560 aa13.05□□□□□ -0.32
CHD4-211ENST00000544484 GSTM1P09488 218 aa13.05□□□□□ -0.32
CHD4-211ENST00000544484 METTL6Q8TCB7 284 aa13.05□□□□□ -0.32
CHD4-211ENST00000544484 ZFP42Q96MM3 310 aa13.05□□□□□ -0.32
CHD4-211ENST00000544484 PWWP2AQ96N64 755 aa13.05□□□□□ -0.32
CHD4-211ENST00000544484 SHBGP04278 402 aa13.05□□□□□ -0.32
CHD4-211ENST00000544484 CD52P31358 61 aa13.05□□□□□ -0.32
CHD4-211ENST00000544484 NCKAP1LP55160 1127 aa13.05□□□□□ -0.32
CHD4-211ENST00000544484 MRPS35P82673 323 aaKnown RBP13.05□□□□□ -0.32
CHD4-211ENST00000544484 STN1Q9H668 368 aaKnown RBP13.05□□□□□ -0.32
CHD4-211ENST00000544484 SLC27A5Q9Y2P5 690 aa13.05□□□□□ -0.32
CHD4-211ENST00000544484 TRDMT1O14717 391 aaKnown RBP13.05□□□□□ -0.32
CHD4-211ENST00000544484 TGFB1I1O43294 461 aa13.05□□□□□ -0.32
CHD4-211ENST00000544484 MRPS6P82932 125 aaKnown RBP13.05□□□□□ -0.32
CHD4-211ENST00000544484 SLC45A4Q5BKX6 768 aa13.05□□□□□ -0.32
CHD4-211ENST00000544484 UNC93AQ86WB7 457 aa13.05□□□□□ -0.32
CHD4-211ENST00000544484 THAP1Q9NVV9 213 aa13.05□□□□□ -0.32
CHD4-211ENST00000544484 MOXD2PA6NHM9 499 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 SAC3D1A6NKF1 404 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 TBC1D12O60347 775 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 PEX10O60683 326 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 IGSF6O95976 241 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 KRT6AP02538 564 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 KRT6BP04259 564 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 ACADSP16219 412 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 KRT6CP48668 564 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 ZNF143P52747 638 aaPredicted RBP13.04□□□□□ -0.32
CHD4-211ENST00000544484 CCDC142Q17RM4 750 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 ARSHQ5FYA8 562 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 KYQ8NBH2 561 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 SHC3Q92529 594 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 POMKQ9H5K3 350 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 WDR41Q9HAD4 459 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 CCDC167Q9P0B6 97 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 RAD51BO15315 384 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 ARHGEF9O43307 516 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 DCXO43602 365 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 CYP1A2P05177 515 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 ATP5C1P36542 298 aaKnown RBP13.04□□□□□ -0.32
CHD4-211ENST00000544484 SKIV2L2P42285 1042 aaKnown RBP13.04□□□□□ -0.32
CHD4-211ENST00000544484 RANBP1P43487 201 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 VAC14Q08AM6 782 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 PLEKHM3Q6ZWE6 761 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 KCTD14Q9BQ13 255 aaPredicted RBP13.04□□□□□ -0.32
CHD4-211ENST00000544484 FGFBP2Q9BYJ0 223 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 POLR1EQ9GZS1 481 aaKnown RBP13.04□□□□□ -0.32
CHD4-211ENST00000544484 NMRAL1Q9HBL8 299 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 MYPNQ86TC9 1320 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 PPP1R11O60927 126 aaPredicted RBP13.04□□□□□ -0.32
CHD4-211ENST00000544484 CBX6O95503 412 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 SP100P23497 879 aaPredicted RBP13.04□□□□□ -0.32
CHD4-211ENST00000544484 CRABP2P29373 138 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 RPA3P35244 121 aaPredicted RBP13.04□□□□□ -0.32
CHD4-211ENST00000544484 CSTF3Q12996 717 aaKnown RBP13.04□□□□□ -0.32
CHD4-211ENST00000544484 ANKS6Q68DC2 871 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 FIG4Q92562 907 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 DCLRE1BQ9H816 532 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 FER1L4A9Z1Z3 1794 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 ASTN2O75129 1339 aaPredicted RBP13.04□□□□□ -0.32
CHD4-211ENST00000544484 NPM3O75607 178 aaKnown RBP13.04□□□□□ -0.32
CHD4-211ENST00000544484 PSMC3P17980 439 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 CD86P42081 329 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 PARP6Q2NL67 630 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 NECAB2Q7Z6G3 386 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 SEPT3Q9UH03 358 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 POLG2Q9UHN1 485 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 TMCC3Q9ULS5 477 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 MRPS15P82914 257 aaKnown RBP13.04□□□□□ -0.32
CHD4-211ENST00000544484 IKBKEQ14164 716 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 POM121L1PQ3SYA9 428 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 ARMC12Q5T9G4 340 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 ZBTB49Q6ZSB9 765 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 OXNAD1Q96HP4 312 aaPredicted RBP13.04□□□□□ -0.32
CHD4-211ENST00000544484 ST3GAL5Q9UNP4 418 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 RIPK3Q9Y572 518 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 A0A0B4J269 797 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 SEC22BO75396 215 aa13.04□□□□□ -0.32
CHD4-211ENST00000544484 SGCGQ13326 291 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms