RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 ZBTB22O15209 634 aa10.39□□□□□ -0.75
TOP3A-208ENST00000542570 MGEA5O60502 916 aa10.39□□□□□ -0.75
TOP3A-208ENST00000542570 ANXA9O76027 345 aa10.39□□□□□ -0.75
TOP3A-208ENST00000542570 TRIM16O95361 564 aa10.39□□□□□ -0.75
TOP3A-208ENST00000542570 ENO1P06733 434 aaKnown RBP10.39□□□□□ -0.75
TOP3A-208ENST00000542570 HDAC4P56524 1084 aa10.39□□□□□ -0.75
TOP3A-208ENST00000542570 NME5P56597 212 aa10.39□□□□□ -0.75
TOP3A-208ENST00000542570 ZNF470Q6ECI4 717 aa10.39□□□□□ -0.75
TOP3A-208ENST00000542570 TTC9BQ8N6N2 239 aa10.39□□□□□ -0.75
TOP3A-208ENST00000542570 SLC17A6Q9P2U8 582 aa10.39□□□□□ -0.75
TOP3A-208ENST00000542570 APOBEC2Q9Y235 224 aaKnown RBP10.39□□□□□ -0.75
TOP3A-208ENST00000542570 CDK5RAP2Q96SN8 1893 aa10.39□□□□□ -0.75
TOP3A-208ENST00000542570 ADGRA2Q96PE1 1338 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 TCRBV7S3A2A0A539 114 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 DDHD2O94830 711 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 DAOAP59103 153 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 TMTC4Q5T4D3 741 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 THEMIS2Q5TEJ8 643 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 PTRHD1Q6GMV3 140 aaKnown RBP10.38□□□□□ -0.75
TOP3A-208ENST00000542570 TP53INP2Q8IXH6 220 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 UNC5BQ8IZJ1 945 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 FBXO22Q8NEZ5 403 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 OR7D4Q8NG98 312 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 SMOQ99835 787 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 CCSER2Q9H7U1 834 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.38□□□□□ -0.75
TOP3A-208ENST00000542570 FAM50BQ9Y247 325 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 FARP1Q9Y4F1 1045 aaPredicted RBP10.38□□□□□ -0.75
TOP3A-208ENST00000542570 COL2A1P02458 1487 aaPredicted RBP10.38□□□□□ -0.75
TOP3A-208ENST00000542570 ERI2A8K979 691 aaKnown RBP10.38□□□□□ -0.75
TOP3A-208ENST00000542570 CYBAP13498 195 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 CTPS1P17812 591 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 TSPAN8P19075 237 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 RPS24P62847 133 aaKnown RBP10.38□□□□□ -0.75
TOP3A-208ENST00000542570 ACTN3Q08043 901 aaPredicted RBP10.38□□□□□ -0.75
TOP3A-208ENST00000542570 MPP3Q13368 585 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 GALNT3Q14435 633 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 KRT33BQ14525 404 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 CNGA3Q16281 694 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 RABGAP1LQ5R372 815 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 LAYNQ6UX15 382 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 SLC26A9Q7LBE3 791 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 GPRIN1Q7Z2K8 1008 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 MON1AQ86VX9 555 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 MFN1Q8IWA4 741 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 ZC3H3Q8IXZ2 948 aaKnown RBP10.38□□□□□ -0.75
TOP3A-208ENST00000542570 KCNV2Q8TDN2 545 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 SCG3Q8WXD2 468 aaKnown RBP10.38□□□□□ -0.75
TOP3A-208ENST00000542570 SERPINB12Q96P63 405 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 NDNQ99608 321 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 OSBPL7Q9BZF2 842 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 ARHGEF4Q9NR80 690 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 GJD2Q9UKL4 321 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 RUVBL2Q9Y230 463 aaKnown RBP10.38□□□□□ -0.75
TOP3A-208ENST00000542570 SLC4A7Q9Y6M7 1214 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 EVPLQ92817 2033 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 ADAMTSL1Q8N6G6 1762 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 RHOBTB1O94844 696 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 RPLP2P05387 115 aaKnown RBP10.38□□□□□ -0.75
TOP3A-208ENST00000542570 PBLDP30039 288 aaPredicted RBP10.38□□□□□ -0.75
TOP3A-208ENST00000542570 FDFT1P37268 417 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 ABL2P42684 1182 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 SLC11A1P49279 550 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 FBXO48Q5FWF7 155 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 LRRC73Q5JTD7 316 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 FNBP1LQ5T0N5 605 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 UNC5AQ6ZN44 842 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 C3orf58Q8NDZ4 430 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.38□□□□□ -0.75
TOP3A-208ENST00000542570 FAM161BQ96MY7 647 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 LRRC40Q9H9A6 602 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 SLCO1B3Q9NPD5 702 aa10.38□□□□□ -0.75
TOP3A-208ENST00000542570 TIAM2Q8IVF5 1701 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 CCDC160A6NGH7 325 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 TBL1XO60907 577 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 SH3BGRLO75368 114 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 SERPINF2P08697 491 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 KCNQ1P51787 676 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 NR1H3Q13133 447 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 PCBP1Q15365 356 aaKnown RBP eCLIP10.37□□□□□ -0.75
TOP3A-208ENST00000542570 PDCD2Q16342 344 aaPredicted RBP10.37□□□□□ -0.75
TOP3A-208ENST00000542570 LRRC38Q5VT99 294 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 TMC5Q6UXY8 1006 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.37□□□□□ -0.75
TOP3A-208ENST00000542570 CMC1Q7Z7K0 106 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 ZNF784Q8NCA9 323 aaPredicted RBP10.37□□□□□ -0.75
TOP3A-208ENST00000542570 SLC35F5Q8WV83 523 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 CAB39LQ9H9S4 337 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 LRRC4CQ9HCJ2 640 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 SCUBE2Q9NQ36 999 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 DYRK4Q9NR20 520 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 RPA3P35244 121 aaPredicted RBP10.37□□□□□ -0.75
TOP3A-208ENST00000542570 HADHAP40939 763 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 CHRNA4P43681 627 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 RASSF2P50749 326 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 RENBPP51606 427 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 CYP4F8P98187 520 aa10.37□□□□□ -0.75
TOP3A-208ENST00000542570 AUHQ13825 339 aaKnown RBP10.37□□□□□ -0.75
TOP3A-208ENST00000542570 RBBP5Q15291 538 aaKnown RBP10.37□□□□□ -0.75
TOP3A-208ENST00000542570 FBXW10Q5XX13 1052 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms