RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 LUC7L3O95232 432 aaKnown RBP23.77■■□□□ 1.4
HOMER3-205ENST00000542541 ERCC2P18074 760 aa23.77■■□□□ 1.4
HOMER3-205ENST00000542541 PTPN7P35236 360 aa23.77■■□□□ 1.4
HOMER3-205ENST00000542541 MAPKAPK2P49137 400 aa23.77■■□□□ 1.4
HOMER3-205ENST00000542541 CDH18Q13634 790 aa23.77■■□□□ 1.4
HOMER3-205ENST00000542541 MFN1Q8IWA4 741 aa23.77■■□□□ 1.4
HOMER3-205ENST00000542541 RTL3Q8N8U3 475 aaKnown RBP23.77■■□□□ 1.4
HOMER3-205ENST00000542541 PBKQ96KB5 322 aa23.77■■□□□ 1.4
HOMER3-205ENST00000542541 SLC2A4RGQ9NR83 387 aa23.77■■□□□ 1.4
HOMER3-205ENST00000542541 SNX12Q9UMY4 172 aa23.77■■□□□ 1.4
HOMER3-205ENST00000542541 ESPNB1AK53 854 aa23.77■■□□□ 1.4
HOMER3-205ENST00000542541 PRLRP16471 622 aa23.77■■□□□ 1.4
HOMER3-205ENST00000542541 ZFXP17010 805 aaPredicted RBP23.77■■□□□ 1.4
HOMER3-205ENST00000542541 TCP1P17987 556 aaKnown RBP23.77■■□□□ 1.4
HOMER3-205ENST00000542541 AMPD1P23109 780 aa23.77■■□□□ 1.4
HOMER3-205ENST00000542541 OR1E1P30953 314 aa23.77■■□□□ 1.4
HOMER3-205ENST00000542541 IRAK1P51617 712 aa23.77■■□□□ 1.4
HOMER3-205ENST00000542541 OXCT1P55809 520 aa23.77■■□□□ 1.4
HOMER3-205ENST00000542541 ZNF211Q13398 564 aaPredicted RBP23.77■■□□□ 1.4
HOMER3-205ENST00000542541 DCAF12L1Q5VU92 463 aa23.77■■□□□ 1.4
HOMER3-205ENST00000542541 PAPD7Q5XG87 772 aaKnown RBP23.77■■□□□ 1.4
HOMER3-205ENST00000542541 RNF43Q68DV7 783 aa23.77■■□□□ 1.4
HOMER3-205ENST00000542541 TMCO3Q6UWJ1 677 aa23.77■■□□□ 1.4
HOMER3-205ENST00000542541 TFAP2DQ7Z6R9 452 aa23.77■■□□□ 1.4
HOMER3-205ENST00000542541 NLRP14Q86W24 1093 aa23.77■■□□□ 1.4
HOMER3-205ENST00000542541 RFX6Q8HWS3 928 aa23.77■■□□□ 1.4
HOMER3-205ENST00000542541 CARNMT1Q8N4J0 409 aa23.77■■□□□ 1.4
HOMER3-205ENST00000542541 LZTR1Q8N653 840 aa23.77■■□□□ 1.4
HOMER3-205ENST00000542541 PCDH19Q8TAB3 1148 aa23.77■■□□□ 1.4
HOMER3-205ENST00000542541 PSMB7Q99436 277 aa23.77■■□□□ 1.4
HOMER3-205ENST00000542541 OSBPL8Q9BZF1 889 aa23.77■■□□□ 1.4
HOMER3-205ENST00000542541 hCG_1818297A0A087WSY0 165 aa23.76■■□□□ 1.39
HOMER3-205ENST00000542541 OTOL1A6NHN0 477 aaPredicted RBP23.76■■□□□ 1.39
HOMER3-205ENST00000542541 CACNG3O60359 315 aa23.76■■□□□ 1.39
HOMER3-205ENST00000542541 TJAP1Q5JTD0 557 aa23.76■■□□□ 1.39
HOMER3-205ENST00000542541 C6orf118Q5T5N4 469 aa23.76■■□□□ 1.39
HOMER3-205ENST00000542541 SETD3Q86TU7 594 aaPredicted RBP23.76■■□□□ 1.39
HOMER3-205ENST00000542541 CIR1Q86X95 450 aaPredicted RBP23.76■■□□□ 1.39
HOMER3-205ENST00000542541 GJD3Q8N144 294 aa23.76■■□□□ 1.39
HOMER3-205ENST00000542541 FIBINQ8TAL6 211 aa23.76■■□□□ 1.39
HOMER3-205ENST00000542541 TBC1D30Q9Y2I9 924 aa23.76■■□□□ 1.39
HOMER3-205ENST00000542541 GJA4P35212 333 aa23.75■■□□□ 1.39
HOMER3-205ENST00000542541 SERPINB6P35237 376 aa23.75■■□□□ 1.39
HOMER3-205ENST00000542541 RNF135Q8IUD6 432 aa23.75■■□□□ 1.39
HOMER3-205ENST00000542541 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.75■■□□□ 1.39
HOMER3-205ENST00000542541 TTC8Q8TAM2 541 aa23.75■■□□□ 1.39
HOMER3-205ENST00000542541 OSBPL9Q96SU4 736 aa23.75■■□□□ 1.39
HOMER3-205ENST00000542541 C8orf33Q9H7E9 229 aaPredicted RBP23.75■■□□□ 1.39
HOMER3-205ENST00000542541 DUSP12Q9UNI6 340 aa23.75■■□□□ 1.39
HOMER3-205ENST00000542541 APOL1O14791 398 aa23.74■■□□□ 1.39
HOMER3-205ENST00000542541 DCLK1O15075 740 aa23.74■■□□□ 1.39
HOMER3-205ENST00000542541 TJP3O95049 919 aa23.74■■□□□ 1.39
HOMER3-205ENST00000542541 KRT10P13645 584 aa23.74■■□□□ 1.39
HOMER3-205ENST00000542541 CXCR5P32302 372 aa23.74■■□□□ 1.39
HOMER3-205ENST00000542541 PREPLQ4J6C6 727 aaPredicted RBP23.74■■□□□ 1.39
HOMER3-205ENST00000542541 KAZNQ674X7 775 aa23.74■■□□□ 1.39
HOMER3-205ENST00000542541 EXOC4Q96A65 974 aa23.74■■□□□ 1.39
HOMER3-205ENST00000542541 ZNF212Q9UDV6 495 aa23.74■■□□□ 1.39
HOMER3-205ENST00000542541 SAR1BQ9Y6B6 198 aa23.74■■□□□ 1.39
HOMER3-205ENST00000542541 KIF26AQ9ULI4 1882 aaPredicted RBP23.74■■□□□ 1.39
HOMER3-205ENST00000542541 CES2O00748 559 aa23.73■■□□□ 1.39
HOMER3-205ENST00000542541 NARSO43776 548 aaKnown RBP23.73■■□□□ 1.39
HOMER3-205ENST00000542541 CEP104O60308 925 aa23.73■■□□□ 1.39
HOMER3-205ENST00000542541 GLULP15104 373 aa23.73■■□□□ 1.39
HOMER3-205ENST00000542541 EIF2DP41214 584 aaKnown RBP23.73■■□□□ 1.39
HOMER3-205ENST00000542541 SLC9A4Q6AI14 798 aa23.73■■□□□ 1.39
HOMER3-205ENST00000542541 ZNF783Q6ZMS7 281 aa23.73■■□□□ 1.39
HOMER3-205ENST00000542541 ANKS1BQ7Z6G8 1248 aa23.73■■□□□ 1.39
HOMER3-205ENST00000542541 UMODL1-AS1Q8N2C9 162 aa23.73■■□□□ 1.39
HOMER3-205ENST00000542541 PQLC3Q8N755 202 aa23.73■■□□□ 1.39
HOMER3-205ENST00000542541 NAT16Q8N8M0 369 aa23.73■■□□□ 1.39
HOMER3-205ENST00000542541 P2RY11Q96G91 374 aa23.73■■□□□ 1.39
HOMER3-205ENST00000542541 HEMGNQ9BXL5 484 aa23.73■■□□□ 1.39
HOMER3-205ENST00000542541 KIAA1522Q9P206 1035 aaPredicted RBP23.73■■□□□ 1.39
HOMER3-205ENST00000542541 DEC1Q9P2X7 70 aa23.73■■□□□ 1.39
HOMER3-205ENST00000542541 FBXO10Q9UK96 956 aa23.73■■□□□ 1.39
HOMER3-205ENST00000542541 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.73■■□□□ 1.39
HOMER3-205ENST00000542541 ZNF500O60304 480 aaPredicted RBP23.73■■□□□ 1.39
HOMER3-205ENST00000542541 CST8O60676 142 aa23.73■■□□□ 1.39
HOMER3-205ENST00000542541 SLC34A2O95436 690 aa23.73■■□□□ 1.39
HOMER3-205ENST00000542541 RHOCP08134 193 aa23.73■■□□□ 1.39
HOMER3-205ENST00000542541 NDST2P52849 883 aa23.73■■□□□ 1.39
HOMER3-205ENST00000542541 YBEYP58557 167 aaPredicted RBP23.73■■□□□ 1.39
HOMER3-205ENST00000542541 SLC12A1Q13621 1099 aa23.73■■□□□ 1.39
HOMER3-205ENST00000542541 LLGL1Q15334 1064 aa23.73■■□□□ 1.39
HOMER3-205ENST00000542541 CCDC181Q5TID7 509 aa23.73■■□□□ 1.39
HOMER3-205ENST00000542541 RALGPS2Q86X27 583 aaPredicted RBP23.73■■□□□ 1.39
HOMER3-205ENST00000542541 ETFBKMTQ8IXQ9 262 aa23.73■■□□□ 1.39
HOMER3-205ENST00000542541 MSANTD3Q96H12 275 aa23.73■■□□□ 1.39
HOMER3-205ENST00000542541 DNAJC17Q9NVM6 304 aaKnown RBP23.73■■□□□ 1.39
HOMER3-205ENST00000542541 ILVBLA1L0T0 632 aa23.72■■□□□ 1.39
HOMER3-205ENST00000542541 TULP3O75386 442 aa23.72■■□□□ 1.39
HOMER3-205ENST00000542541 ETFBP38117 255 aa23.72■■□□□ 1.39
HOMER3-205ENST00000542541 DGKGP49619 791 aa23.72■■□□□ 1.39
HOMER3-205ENST00000542541 PAFAH1B3Q15102 231 aaKnown RBP23.72■■□□□ 1.39
HOMER3-205ENST00000542541 GAB4Q2WGN9 574 aa23.72■■□□□ 1.39
HOMER3-205ENST00000542541 AADACL2Q6P093 401 aa23.72■■□□□ 1.39
HOMER3-205ENST00000542541 C1orf228Q6PIY5 440 aa23.72■■□□□ 1.39
HOMER3-205ENST00000542541 BBS12Q6ZW61 710 aa23.72■■□□□ 1.39
HOMER3-205ENST00000542541 BZW1Q7L1Q6 419 aaKnown RBP23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms