RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 CBFA2T2O43439 604 aa20.7■□□□□ 0.9
CACNA2D4-215ENST00000542340 ZNF217O75362 1048 aa20.7■□□□□ 0.9
CACNA2D4-215ENST00000542340 SKILP12757 684 aa20.7■□□□□ 0.9
CACNA2D4-215ENST00000542340 GPD1P21695 349 aa20.7■□□□□ 0.9
CACNA2D4-215ENST00000542340 RRM1P23921 792 aa20.7■□□□□ 0.9
CACNA2D4-215ENST00000542340 GGCXP38435 758 aa20.7■□□□□ 0.9
CACNA2D4-215ENST00000542340 PLK1P53350 603 aa20.7■□□□□ 0.9
CACNA2D4-215ENST00000542340 CDH4P55283 916 aa20.7■□□□□ 0.9
CACNA2D4-215ENST00000542340 ZNF177Q13360 481 aaPredicted RBP20.7■□□□□ 0.9
CACNA2D4-215ENST00000542340 CDO1Q16878 200 aa20.7■□□□□ 0.9
CACNA2D4-215ENST00000542340 PLEKHG6Q3KR16 790 aa20.7■□□□□ 0.9
CACNA2D4-215ENST00000542340 PPP1R15BQ5SWA1 713 aa20.7■□□□□ 0.9
CACNA2D4-215ENST00000542340 METTL3Q86U44 580 aaKnown RBP20.7■□□□□ 0.9
CACNA2D4-215ENST00000542340 CIR1Q86X95 450 aaPredicted RBP20.7■□□□□ 0.9
CACNA2D4-215ENST00000542340 ZNF683Q8IZ20 524 aa20.7■□□□□ 0.9
CACNA2D4-215ENST00000542340 KDM1BQ8NB78 822 aa20.7■□□□□ 0.9
CACNA2D4-215ENST00000542340 CPLX3Q8WVH0 158 aa20.7■□□□□ 0.9
CACNA2D4-215ENST00000542340 ERLEC1Q96DZ1 483 aa20.7■□□□□ 0.9
CACNA2D4-215ENST00000542340 PPP1R9BQ96SB3 815 aa20.7■□□□□ 0.9
CACNA2D4-215ENST00000542340 LUC7L2Q9Y383 392 aaKnown RBP20.7■□□□□ 0.9
CACNA2D4-215ENST00000542340 CFAP54Q96N23 3096 aa20.69■□□□□ 0.9
CACNA2D4-215ENST00000542340 IGLV3-10A0A075B6K4 115 aa20.69■□□□□ 0.9
CACNA2D4-215ENST00000542340 ANKRD62A6NC57 917 aa20.69■□□□□ 0.9
CACNA2D4-215ENST00000542340 DRGXA6NNA5 263 aa20.69■□□□□ 0.9
CACNA2D4-215ENST00000542340 TMCO5BA8MYB1 307 aa20.69■□□□□ 0.9
CACNA2D4-215ENST00000542340 EPN2O95208 641 aa20.69■□□□□ 0.9
CACNA2D4-215ENST00000542340 SRPRAP08240 638 aaKnown RBP20.69■□□□□ 0.9
CACNA2D4-215ENST00000542340 BCKDHBP21953 392 aa20.69■□□□□ 0.9
CACNA2D4-215ENST00000542340 ADRA1BP35368 520 aa20.69■□□□□ 0.9
CACNA2D4-215ENST00000542340 ZNF143P52747 638 aaPredicted RBP20.69■□□□□ 0.9
CACNA2D4-215ENST00000542340 CAMK2GQ13555 558 aaPredicted RBP20.69■□□□□ 0.9
CACNA2D4-215ENST00000542340 ARL13BQ3SXY8 428 aa20.69■□□□□ 0.9
CACNA2D4-215ENST00000542340 SH3PXD2AQ5TCZ1 1133 aa20.69■□□□□ 0.9
CACNA2D4-215ENST00000542340 PMS2CLQ68D20 193 aa20.69■□□□□ 0.9
CACNA2D4-215ENST00000542340 CXorf57Q6NSI4 855 aaKnown RBP20.69■□□□□ 0.9
CACNA2D4-215ENST00000542340 APCDD1Q8J025 514 aa20.69■□□□□ 0.9
CACNA2D4-215ENST00000542340 FAM172AQ8WUF8 416 aa20.69■□□□□ 0.9
CACNA2D4-215ENST00000542340 PRDM16Q9HAZ2 1276 aa20.69■□□□□ 0.9
CACNA2D4-215ENST00000542340 TMPRSS4Q9NRS4 437 aa20.69■□□□□ 0.9
CACNA2D4-215ENST00000542340 SUN2Q9UH99 717 aa20.69■□□□□ 0.9
CACNA2D4-215ENST00000542340 TBC1D30Q9Y2I9 924 aa20.69■□□□□ 0.9
CACNA2D4-215ENST00000542340 PCDHGA5Q9Y5G8 931 aa20.69■□□□□ 0.9
CACNA2D4-215ENST00000542340 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.69■□□□□ 0.9
CACNA2D4-215ENST00000542340 SPAG17Q6Q759 2223 aa20.69■□□□□ 0.9
CACNA2D4-215ENST00000542340 MAP3K13O43283 966 aa20.68■□□□□ 0.9
CACNA2D4-215ENST00000542340 FTLP02792 175 aaPredicted RBP20.68■□□□□ 0.9
CACNA2D4-215ENST00000542340 GYPCP04921 128 aa20.68■□□□□ 0.9
CACNA2D4-215ENST00000542340 HLA-EP13747 358 aa20.68■□□□□ 0.9
CACNA2D4-215ENST00000542340 TGM1P22735 817 aa20.68■□□□□ 0.9
CACNA2D4-215ENST00000542340 IRAK1P51617 712 aa20.68■□□□□ 0.9
CACNA2D4-215ENST00000542340 HDAC4P56524 1084 aa20.68■□□□□ 0.9
CACNA2D4-215ENST00000542340 ST8SIA6P61647 398 aa20.68■□□□□ 0.9
CACNA2D4-215ENST00000542340 RPL7AP62424 266 aaKnown RBP20.68■□□□□ 0.9
CACNA2D4-215ENST00000542340 ECT2LQ008S8 904 aa20.68■□□□□ 0.9
CACNA2D4-215ENST00000542340 RAB6CQ53S08 254 aa20.68■□□□□ 0.9
CACNA2D4-215ENST00000542340 HGSNATQ68CP4 663 aa20.68■□□□□ 0.9
CACNA2D4-215ENST00000542340 DCUN1D2Q6PH85 259 aa20.68■□□□□ 0.9
CACNA2D4-215ENST00000542340 TMPRSS6Q8IU80 811 aa20.68■□□□□ 0.9
CACNA2D4-215ENST00000542340 KIAA2013Q8IYS2 634 aa20.68■□□□□ 0.9
CACNA2D4-215ENST00000542340 RNF214Q8ND24 703 aa20.68■□□□□ 0.9
CACNA2D4-215ENST00000542340 MYO19Q96H55 970 aa20.68■□□□□ 0.9
CACNA2D4-215ENST00000542340 MRGPRX3Q96LB0 322 aa20.68■□□□□ 0.9
CACNA2D4-215ENST00000542340 MCEEQ96PE7 176 aa20.68■□□□□ 0.9
CACNA2D4-215ENST00000542340 MKRN2Q9H000 416 aaKnown RBP20.68■□□□□ 0.9
CACNA2D4-215ENST00000542340 RAB6CQ9H0N0 254 aa20.68■□□□□ 0.9
CACNA2D4-215ENST00000542340 SLC6A17Q9H1V8 727 aa20.68■□□□□ 0.9
CACNA2D4-215ENST00000542340 FBRSQ9HAH7 460 aa20.68■□□□□ 0.9
CACNA2D4-215ENST00000542340 PARVAQ9NVD7 372 aa20.68■□□□□ 0.9
CACNA2D4-215ENST00000542340 MBD1Q9UIS9 605 aaPredicted RBP20.68■□□□□ 0.9
CACNA2D4-215ENST00000542340 ERVW-1Q9UQF0 538 aa20.68■□□□□ 0.9
CACNA2D4-215ENST00000542340 SNX10Q9Y5X0 201 aa20.68■□□□□ 0.9
CACNA2D4-215ENST00000542340 SDK1Q7Z5N4 2213 aa20.68■□□□□ 0.9
CACNA2D4-215ENST00000542340 E9PAM4 449 aa20.67■□□□□ 0.9
CACNA2D4-215ENST00000542340 RTN2O75298 545 aa20.67■□□□□ 0.9
CACNA2D4-215ENST00000542340 CNTN5O94779 1100 aa20.67■□□□□ 0.9
CACNA2D4-215ENST00000542340 SERPING1P05155 500 aa20.67■□□□□ 0.9
CACNA2D4-215ENST00000542340 C7P10643 843 aa20.67■□□□□ 0.9
CACNA2D4-215ENST00000542340 MZF1P28698 734 aaPredicted RBP20.67■□□□□ 0.9
CACNA2D4-215ENST00000542340 COPAP53621 1224 aa20.67■□□□□ 0.9
CACNA2D4-215ENST00000542340 SULT2A1Q06520 285 aa20.67■□□□□ 0.9
CACNA2D4-215ENST00000542340 SPEM2Q0P670 501 aa20.67■□□□□ 0.9
CACNA2D4-215ENST00000542340 MAMLD1Q13495 774 aa20.67■□□□□ 0.9
CACNA2D4-215ENST00000542340 ARID5BQ14865 1188 aa20.67■□□□□ 0.9
CACNA2D4-215ENST00000542340 ALFQ53S48 1182 aa20.67■□□□□ 0.9
CACNA2D4-215ENST00000542340 SPDYCQ5MJ68 293 aa20.67■□□□□ 0.9
CACNA2D4-215ENST00000542340 ARTNQ5T4W7 220 aa20.67■□□□□ 0.9
CACNA2D4-215ENST00000542340 PLEKHA7Q6IQ23 1121 aa20.67■□□□□ 0.9
CACNA2D4-215ENST00000542340 KIAA1324Q6UXG2 1013 aaKnown RBP20.67■□□□□ 0.9
CACNA2D4-215ENST00000542340 SLC36A4Q6YBV0 504 aa20.67■□□□□ 0.9
CACNA2D4-215ENST00000542340 FRMD1Q8N878 549 aa20.67■□□□□ 0.9
CACNA2D4-215ENST00000542340 OR2T3Q8NH03 318 aa20.67■□□□□ 0.9
CACNA2D4-215ENST00000542340 ALG14Q96F25 216 aa20.67■□□□□ 0.9
CACNA2D4-215ENST00000542340 FEM1AQ9BSK4 669 aa20.67■□□□□ 0.9
CACNA2D4-215ENST00000542340 CNPY3Q9BT09 278 aa20.67■□□□□ 0.9
CACNA2D4-215ENST00000542340 OSBPL2Q9H1P3 480 aa20.67■□□□□ 0.9
CACNA2D4-215ENST00000542340 PARD6AQ9NPB6 346 aa20.67■□□□□ 0.9
CACNA2D4-215ENST00000542340 CTSOP43234 321 aaPredicted RBP20.66■□□□□ 0.9
CACNA2D4-215ENST00000542340 NRG1Q02297 640 aaPredicted RBP20.66■□□□□ 0.9
CACNA2D4-215ENST00000542340 CSRP2Q16527 193 aa20.66■□□□□ 0.9
CACNA2D4-215ENST00000542340 TDRD12Q587J7 1177 aaKnown RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms