RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 TBC1D25Q3MII6 688 aa10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 ARCQ7LC44 396 aa10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 FAM110BQ8TC76 370 aa10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 FAM149B1Q96BN6 582 aa10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 KIF12Q96FN5 646 aa10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 P2RY11Q96G91 374 aa10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 SPATA33Q96N06 139 aa10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 PRPF18Q99633 342 aaKnown RBP10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 C1orf21Q9H246 121 aa10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 FZD8Q9H461 694 aa10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 CACNG4Q9UBN1 327 aa10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 TUBGCP4Q9UGJ1 667 aa10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 BARX2Q9UMQ3 279 aaPredicted RBP10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 ADAMTS5Q9UNA0 930 aa10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 SNX10Q9Y5X0 201 aa10.62□□□□□ -0.71
CDC42SE1-207ENST00000540998 GLRA3O75311 464 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 MT-CO1P00395 513 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 TFAP2AP05549 437 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 PTPN1P18031 435 aaKnown RBP10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 LMO2P25791 158 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 FDFT1P37268 417 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 NUMBP49757 651 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 CHN2P52757 468 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 HNRNPDQ14103 355 aaKnown RBP10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 TMEM132DQ14C87 1099 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 PDCD2Q16342 344 aaPredicted RBP10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 NADK2Q4G0N4 442 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 BOLA3Q53S33 107 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 CERCAMQ5T4B2 595 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 FAM160B1Q5W0V3 765 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 ZNF280DQ6N043 979 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 STRA8Q7Z7C7 330 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 SESTD1Q86VW0 696 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 RTKN2Q8IZC4 609 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 MTMR14Q8NCE2 650 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 ICA1LQ8NDH6 482 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 OR6B3Q8NGW1 331 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 SGF29Q96ES7 293 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 ZMAT2Q96NC0 199 aaKnown RBP10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 NT5C1AQ9BXI3 368 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 PDZD7Q9H5P4 517 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 RHBDL2Q9NX52 303 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 DPP3Q9NY33 737 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 TXNDC16Q9P2K2 825 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 AKT3Q9Y243 479 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 VILLO15195 856 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 DNAJA2O60884 412 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 SLC6A3Q01959 620 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 LSAMPQ13449 338 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 ANKRD20A4Q4UJ75 823 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 LCLAT1Q6UWP7 414 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 KBTBD6Q86V97 674 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 CDKL3Q8IVW4 592 aaPredicted RBP10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 TDRD5Q8NAT2 981 aaKnown RBP10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 MCUQ8NE86 351 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 TMA16Q96EY4 203 aaKnown RBP10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 ZNF512Q96ME7 567 aaPredicted RBP10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 NPAS2Q99743 824 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 SHROOM3Q8TF72 1996 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 GCATO75600 419 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 FBXO21O94952 628 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 KLHL2O95198 593 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 CRTAMO95727 393 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 ZNF286BP0CG31 522 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 MYBPC1Q00872 1141 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 NME3Q13232 169 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 GRM1Q13255 1194 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 SNAPC2Q13487 334 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 CEACAM7Q14002 265 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 PDK2Q15119 407 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 CYTH1Q15438 398 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 CNGA3Q16281 694 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 FSTL4Q6MZW2 842 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 METTL7BQ6UX53 244 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 AMIGO2Q86SJ2 522 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 BHLHE22Q8NFJ8 381 aaPredicted RBP10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 OMDQ99983 421 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 GOLGA2P5Q9HBQ8 144 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 MKS1Q9NXB0 559 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 GGA3Q9NZ52 723 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 ITGA11Q9UKX5 1188 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 LZTS1Q9Y250 596 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 TBC1D30Q9Y2I9 924 aa10.61□□□□□ -0.71
CDC42SE1-207ENST00000540998 PSME4Q14997 1843 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 CROCCQ5TZA2 2017 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 FAM72CH0Y354 149 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 IRF6O14896 467 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 PIK3R1P27986 724 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 ICAM3P32942 547 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 NDUFV1P49821 464 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 MTTPP55157 894 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 SEMA5AQ13591 1074 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 MXD4Q14582 209 aaPredicted RBP10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 MYLK3Q32MK0 819 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 FAM72AQ5TYM5 149 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 FAM72DQ6L9T8 149 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 SDCCAG8Q86SQ7 713 aaPredicted RBP10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 FAM72BQ86X60 149 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 ZNF567Q8N184 647 aa10.6□□□□□ -0.71
CDC42SE1-207ENST00000540998 OPTNQ96CV9 577 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms