RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 WDR75Q8IWA0 830 aaKnown RBP5.36□□□□□ -1.55
PROM1-220ENST00000540805 MARVELD2Q8N4S9 558 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 TTC13Q8NBP0 860 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.36□□□□□ -1.55
PROM1-220ENST00000540805 ACTL9Q8TC94 416 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 GFM2Q969S9 779 aaKnown RBP5.36□□□□□ -1.55
PROM1-220ENST00000540805 ASIC4Q96FT7 647 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 TMEM169Q96HH4 297 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 MFSD14AQ96MC6 490 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 FRMD8P1Q9BZ68 369 aaPredicted RBP5.36□□□□□ -1.55
PROM1-220ENST00000540805 SMARCAD1Q9H4L7 1026 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 C10orf88Q9H8K7 445 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 CYP4F11Q9HBI6 524 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 KCNH7Q9NS40 1196 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 PLK2Q9NYY3 685 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 BTBD7Q9P203 1132 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 KLHL8Q9P2G9 620 aaPredicted RBP5.36□□□□□ -1.55
PROM1-220ENST00000540805 THEGQ9P2T0 379 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 NOX1Q9Y5S8 564 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 MYO7AQ13402 2215 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 SDR42E2A6NKP2 422 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 AGRPO00253 132 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 PEX10O60683 326 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 USP2O75604 605 aaPredicted RBP5.36□□□□□ -1.55
PROM1-220ENST00000540805 TOMM70O94826 608 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 CFHP08603 1231 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 MYCLP1P12525 358 aaPredicted RBP5.36□□□□□ -1.55
PROM1-220ENST00000540805 MSX2P35548 267 aaPredicted RBP5.36□□□□□ -1.55
PROM1-220ENST00000540805 SERPINB8P50452 374 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 FCGRTP55899 365 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 BCAR1P56945 870 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 RPL7AP62424 266 aaKnown RBP5.36□□□□□ -1.55
PROM1-220ENST00000540805 PHEXP78562 749 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 PRKCEQ02156 737 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 TBL3Q12788 808 aaKnown RBP5.36□□□□□ -1.55
PROM1-220ENST00000540805 STX3Q13277 289 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 PRPSAP1Q14558 356 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 C16orf72Q14CZ0 275 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 TMEM132BQ14DG7 1078 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 PDK1Q15118 436 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 CYTH1Q15438 398 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 SURF1Q15526 300 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 TKFCQ3LXA3 575 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 ARL13BQ3SXY8 428 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 RALGPS1Q5JS13 557 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 FAM102AQ5T9C2 384 aaPredicted RBP5.36□□□□□ -1.55
PROM1-220ENST00000540805 NIPA1Q7RTP0 329 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 MAP4K3Q8IVH8 894 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 YAF2Q8IY57 180 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 PPM1NQ8N819 430 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 MCEEQ96PE7 176 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 EBF4Q9BQW3 602 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 DHX35Q9H5Z1 703 aaKnown RBP5.36□□□□□ -1.55
PROM1-220ENST00000540805 SIAEQ9HAT2 523 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 GPRC5CQ9NQ84 441 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 PDLIM7Q9NR12 457 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 SIRPGQ9P1W8 387 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 CDH22Q9UJ99 828 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 ITGA11Q9UKX5 1188 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 TBX20Q9UMR3 447 aa5.36□□□□□ -1.55
PROM1-220ENST00000540805 PCM1Q15154 2024 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 TMEM191CA6NGB0 347 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 CAPN8A6NHC0 703 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 FBP2O00757 339 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 SERPINB7O75635 380 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 TNFAIP8O95379 198 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 TFAP2AP05549 437 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 IRF1P10914 325 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 NR4A1P22736 598 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 SDC4P31431 198 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 BACE1P56817 501 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 ATP1A4Q13733 1029 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 BTBD8Q5XKL5 378 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 SZRD1Q7Z422 152 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 GPD1LQ8N335 351 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 GALNT4Q8N4A0 578 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 CCDC33Q8N5R6 958 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 OR6P1Q8NGX9 317 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 ACTRT2Q8TDY3 377 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 GIPC3Q8TF64 312 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 DDI1Q8WTU0 396 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 CFAP36Q96G28 342 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 DCUN1D1Q96GG9 259 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 RIT2Q99578 217 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 DCUN1D5Q9BTE7 237 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 SLC13A1Q9BZW2 595 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 XAB2Q9HCS7 855 aaKnown RBP5.35□□□□□ -1.55
PROM1-220ENST00000540805 MRPL42Q9Y6G3 142 aaKnown RBP5.35□□□□□ -1.55
PROM1-220ENST00000540805 TMEM150BA6NC51 233 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 CCDC85CA6NKD9 419 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 F8VP50 259 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 PFDN6O15212 129 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 SNNO75324 88 aaPredicted RBP5.35□□□□□ -1.55
PROM1-220ENST00000540805 HLA-DRAP01903 254 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 PROCP04070 461 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 CALB1P05937 261 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 TCF7P36402 384 aaPredicted RBP5.35□□□□□ -1.55
PROM1-220ENST00000540805 ALDH1A3P47895 512 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 CD97P48960 835 aa5.35□□□□□ -1.55
PROM1-220ENST00000540805 GTF2A2P52657 109 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms