RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 C10orf62Q5T681 223 aaPredicted RBP6.19□□□□□ -1.42
PTPRD-214ENST00000540109 DEPDC1Q5TB30 811 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 PLA2G4FQ68DD2 849 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 STRA8Q7Z7C7 330 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 SLC7A5P1Q8MH63 180 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 CCDC33Q8N5R6 958 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 METTL13Q8N6R0 699 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 LSM14AQ8ND56 463 aaKnown RBP6.19□□□□□ -1.42
PTPRD-214ENST00000540109 HELQQ8TDG4 1101 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 HTRA1Q92743 480 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 SSU72Q9NP77 194 aaKnown RBP6.19□□□□□ -1.42
PTPRD-214ENST00000540109 XPNPEP1Q9NQW7 623 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 CCDC59Q9P031 241 aaKnown RBP6.19□□□□□ -1.42
PTPRD-214ENST00000540109 CRNNQ9UBG3 495 aaPredicted RBP6.19□□□□□ -1.42
PTPRD-214ENST00000540109 PTBP2Q9UKA9 531 aaKnown RBP6.19□□□□□ -1.42
PTPRD-214ENST00000540109 SPATA2Q9UM82 520 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 PRR23D1E9PI22 279 aaPredicted RBP6.19□□□□□ -1.42
PTPRD-214ENST00000540109 NEMP1O14524 444 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 MED7O43513 233 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 MTRF1O75570 445 aaKnown RBP6.19□□□□□ -1.42
PTPRD-214ENST00000540109 ABHD2P08910 425 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 PRR23D2P0DMB1 279 aaPredicted RBP6.19□□□□□ -1.42
PTPRD-214ENST00000540109 UBA1P22314 1058 aaKnown RBP6.19□□□□□ -1.42
PTPRD-214ENST00000540109 RFX4Q33E94 735 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 ERMARDQ5T6L9 678 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 ANKMY2Q8IV38 441 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 NUP93Q8N1F7 819 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 ZNF564Q8TBZ8 553 aaPredicted RBP6.19□□□□□ -1.42
PTPRD-214ENST00000540109 TRPM4Q8TD43 1214 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 PACSIN1Q9BY11 444 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 MUC13Q9H3R2 512 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 COG4Q9H9E3 785 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 PRMT7Q9NVM4 692 aaPredicted RBP6.19□□□□□ -1.42
PTPRD-214ENST00000540109 MRPL39Q9NYK5 338 aaKnown RBP6.19□□□□□ -1.42
PTPRD-214ENST00000540109 RBAKQ9NYW8 714 aaPredicted RBP6.19□□□□□ -1.42
PTPRD-214ENST00000540109 PCYOX1Q9UHG3 505 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 RAB26Q9ULW5 256 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 MAGED2Q9UNF1 606 aaPredicted RBP6.19□□□□□ -1.42
PTPRD-214ENST00000540109 SNX13Q9Y5W8 968 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 A0A0B4J269 797 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 ZNF862O60290 1169 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 FUT4P22083 530 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 RRM1P23921 792 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 MAPK4P31152 587 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 CDK18Q07002 472 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 ACAP2Q15057 778 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 STILQ15468 1287 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 MAPK6Q16659 721 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 KIF19Q2TAC6 998 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 TBC1D25Q3MII6 688 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 LRRC38Q5VT99 294 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 GADL1Q6ZQY3 521 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.19□□□□□ -1.42
PTPRD-214ENST00000540109 CBWD2Q8IUF1 395 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 DEPDC1BQ8WUY9 529 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 PTPRN2Q92932 1015 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 CCDC126Q96EE4 140 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 NSMCE3Q96MG7 304 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 MMP19Q99542 508 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 SYT15Q9BQS2 421 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 C6orf62Q9GZU0 229 aaPredicted RBP6.19□□□□□ -1.42
PTPRD-214ENST00000540109 SALL4Q9UJQ4 1053 aa6.19□□□□□ -1.42
PTPRD-214ENST00000540109 ZBTB39O15060 712 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 SNPHO15079 494 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 OGTO15294 1046 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 ZSCAN9O15535 394 aaPredicted RBP6.18□□□□□ -1.42
PTPRD-214ENST00000540109 MTSS1O43312 755 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 MAGEC1O60732 1142 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 SNX2O60749 519 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 TNNI1P19237 187 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 PHKA2P46019 1235 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 PDIA2Q13087 525 aaKnown RBP6.18□□□□□ -1.42
PTPRD-214ENST00000540109 SMAD1Q15797 465 aaKnown RBP6.18□□□□□ -1.42
PTPRD-214ENST00000540109 CYP1B1Q16678 543 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 C5orf22Q49AR2 442 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 IQSEC1Q6DN90 963 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 TAF2Q6P1X5 1199 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 SV2AQ7L0J3 742 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 PHF13Q86YI8 300 aaPredicted RBP6.18□□□□□ -1.42
PTPRD-214ENST00000540109 ARHGEF19Q8IW93 802 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 POC5Q8NA72 575 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 TSPAN14Q8NG11 270 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 OR6Y1Q8NGX8 325 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 NARS2Q96I59 477 aaKnown RBP6.18□□□□□ -1.42
PTPRD-214ENST00000540109 CORO1BQ9BR76 489 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 TRIM8Q9BZR9 551 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 PNPLA3Q9NST1 481 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 PCDHA3Q9Y5H8 950 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 DDX3YO15523 660 aaKnown RBP6.18□□□□□ -1.42
PTPRD-214ENST00000540109 SULT1B1O43704 296 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 SNX3O60493 162 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 ZBTB11O95625 1053 aaPredicted RBP6.18□□□□□ -1.42
PTPRD-214ENST00000540109 IFNA16P05015 189 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 ANPEPP15144 967 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 ADSSP30520 456 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 CSTF3Q12996 717 aaKnown RBP6.18□□□□□ -1.42
PTPRD-214ENST00000540109 CUL2Q13617 745 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 DPYSQ14117 519 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 TAF5Q15542 800 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 TYSND1Q2T9J0 566 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms